FFCP PHASE1:Hg19::chr1:168409732..168409736,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:168409732..168409736,+ | |||
|coexpression_cluster_id=C3132 | |||
|description=CAGE_peak_at_chr1:168409732..168409736,+ | |description=CAGE_peak_at_chr1:168409732..168409736,+ | ||
|id=chr1:168409732..168409736,+ | |id=chr1:168409732..168409736,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.44e-33;19!CL:0002575;3.14e-28;2!CL:0002536;4.08e-27;2!CL:0002577;9.49e-19;3!CL:0000669;1.23e-14;4!CL:0002537;1.31e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.30e-33,19;CL:0002575,3.14e-28,2;CL:0002536,4.67e-27,2;CL:0002577,8.69e-19,3;CL:0000669,1.23e-14,4;CL:0002537,1.15e-11,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.10e-14!14;UBERON:0000158!7.10e-14!14;UBERON:0003124!9.90e-09!7;UBERON:0000478!2.01e-08!24;UBERON:0001987!1.37e-07!4;UBERON:0004340!1.37e-07!4;UBERON:0004923!3.64e-07!57;UBERON:0000305!7.90e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!7.10e-14!14;UBERON:0000158!7.10e-14!14;UBERON:0003124!9.90e-09!7;UBERON:0000478!2.01e-08!24;UBERON:0001987!1.37e-07!4;UBERON:0004340!1.37e-07!4;UBERON:0004923!3.64e-07!57;UBERON:0000305!7.90e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.34e-30;7!UBERON:0000478;1.69e-26;24!UBERON:0005631;2.23e-21;10!UBERON:0000158;2.23e-21;10!UBERON:0001987;2.58e-14;4!UBERON:0000341;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.08e-33,14;UBERON:0000158,1.08e-33,14;UBERON:0000305,2.09e-30,7;UBERON:0004871,1.16e-26,8;UBERON:0000478,1.57e-26,24;UBERON:0001987,2.41e-14,4;UBERON:0004340,2.41e-14,4;UBERON:0003124,1.37e-08,7;UBERON:0000341,5.37e-08,2;UBERON:0004923,6.26e-07,66 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,1.09220686065086,1.58260186937072,0.123766352960047,0.994192127183747,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,2.1798003441664,0,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0,3.25572963234866,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.535286966391485,0.315404830067869,0.468565659970853,0,0,0,0,0,0,10.573262502988,13.0394501048125,0,0,0,0.303127571446259,8.32177197552485,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.979352392114111,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0.687743287091848,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.296964680832639,1.53580351049616,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0.325942115766024,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.403100834920358,0,0,0.157566364614447,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0.347716544605159,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,1.39265542612958,0,0.11294608203896,0.439762066981716,0.150962843566674,0,0,0,0,0,0,0,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0.437062287854782,0,0,0,0,0.250707539292375,0,0,0,0,0,1.66645102024618,0,0,0,0,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0.269475606319761,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,1.09220686065086,1.58260186937072,0.123766352960047,0.994192127183747,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,2.1798003441664,0,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0,3.25572963234866,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.535286966391485,0.315404830067869,0.468565659970853,0,0,0,0,0,0,10.573262502988,13.0394501048125,0,0,0,0.303127571446259,8.32177197552485,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.979352392114111,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0.687743287091848,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.296964680832639,1.53580351049616,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0.325942115766024,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.403100834920358,0,0,0.157566364614447,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0.347716544605159,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,1.39265542612958,0,0.11294608203896,0.439762066981716,0.150962843566674,0,0,0,0,0,0,0,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0.437062287854782,0,0,0,0,0.250707539292375,0,0,0,0,0,1.66645102024618,0,0,0,0,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0.269475606319761,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:168409732..168409736,+ | |short_description=p@chr1:168409732..168409736,+ | ||
}} | }} |
Latest revision as of 00:07, 28 July 2015
Short description: | p@chr1:168409732..168409736, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:168409732..168409736, + |
Coexpression cluster: | C3132_Pericytes_Mesenchymal_Skeletal_skeletal_amniotic_Hair_gastric |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.30e-33 | 19 |
central nervous system pericyte | 3.14e-28 | 2 |
amniotic epithelial cell | 4.67e-27 | 2 |
placental epithelial cell | 8.69e-19 | 3 |
pericyte cell | 1.23e-14 | 4 |
amnion mesenchymal stem cell | 1.15e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.08e-33 | 14 |
membranous layer | 1.08e-33 | 14 |
amnion | 2.09e-30 | 7 |
somatic layer of lateral plate mesoderm | 1.16e-26 | 8 |
extraembryonic structure | 1.57e-26 | 24 |
placenta | 2.41e-14 | 4 |
allantois | 2.41e-14 | 4 |
chorion | 1.37e-08 | 7 |
throat | 5.37e-08 | 2 |
organ component layer | 6.26e-07 | 66 |