FFCP PHASE1:Hg19::chr1:153939955..153940009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148327 | |EntrezGene=148327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18854 | |HGNC=18854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477617_5end | |association_with_transcript=0bp_to_ENST00000477617_5end | ||
|cluster_id=chr1:153939955..153940009,+ | |||
|description=CAGE_peak_2_at_CREB3L4_5end | |description=CAGE_peak_2_at_CREB3L4_5end | ||
|id=chr1:153939955..153940009,+ | |id=chr1:153939955..153940009,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.12e-19!254 | |ontology_enrichment_celltype=CL:0000066!1.12e-19!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.44e-17,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.09e-07;29!UBERON:0001041;3.34e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!4.49e-31!143;DOID:305!5.07e-24!106;DOID:162!1.94e-23!235;DOID:14566!2.56e-22!239 | |ontology_enrichment_disease=DOID:0050687!4.49e-31!143;DOID:305!5.07e-24!106;DOID:162!1.94e-23!235;DOID:14566!2.56e-22!239 | ||
|ontology_enrichment_disease_v019=DOID:0050687;1.88e-07;143!DOID:305;1.91e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.50e-30,143;DOID:305,3.06e-23,106;DOID:162,4.33e-21,235;DOID:14566,2.53e-20,239 | |||
|ontology_enrichment_uberon=UBERON:0000077!6.91e-15!130;UBERON:0004921!2.50e-14!129;UBERON:0004185!2.50e-14!129;UBERON:0004119!5.07e-14!169;UBERON:0000925!5.07e-14!169;UBERON:0006595!5.07e-14!169;UBERON:0001007!6.84e-14!155;UBERON:0001555!6.84e-14!155;UBERON:0007026!6.84e-14!155;UBERON:0001041!2.24e-13!98;UBERON:0005177!1.54e-12!107;UBERON:0000466!7.82e-11!126;UBERON:0003104!1.46e-10!238;UBERON:0009142!1.46e-10!238;UBERON:0000481!2.24e-10!347;UBERON:0001048!5.15e-09!168;UBERON:0000468!3.39e-08!659;UBERON:0000464!3.45e-08!104;UBERON:0008947!4.28e-08!38;UBERON:0003258!4.28e-08!38;UBERON:0009569!5.31e-08!113;UBERON:0000475!2.34e-07!365;UBERON:0005911!3.23e-07!82;UBERON:0002100!3.53e-07!216 | |ontology_enrichment_uberon=UBERON:0000077!6.91e-15!130;UBERON:0004921!2.50e-14!129;UBERON:0004185!2.50e-14!129;UBERON:0004119!5.07e-14!169;UBERON:0000925!5.07e-14!169;UBERON:0006595!5.07e-14!169;UBERON:0001007!6.84e-14!155;UBERON:0001555!6.84e-14!155;UBERON:0007026!6.84e-14!155;UBERON:0001041!2.24e-13!98;UBERON:0005177!1.54e-12!107;UBERON:0000466!7.82e-11!126;UBERON:0003104!1.46e-10!238;UBERON:0009142!1.46e-10!238;UBERON:0000481!2.24e-10!347;UBERON:0001048!5.15e-09!168;UBERON:0000468!3.39e-08!659;UBERON:0000464!3.45e-08!104;UBERON:0008947!4.28e-08!38;UBERON:0003258!4.28e-08!38;UBERON:0009569!5.31e-08!113;UBERON:0000475!2.34e-07!365;UBERON:0005911!3.23e-07!82;UBERON:0002100!3.53e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.33e-11,118;UBERON:0005177,1.63e-11,101;UBERON:0001041,6.89e-11,87;UBERON:0001007,1.72e-10,145;UBERON:0001555,1.72e-10,145;UBERON:0007026,1.72e-10,145;UBERON:0004119,4.11e-10,160;UBERON:0000925,4.11e-10,160;UBERON:0006595,4.11e-10,160;UBERON:0008947,1.37e-07,38;UBERON:0003258,1.37e-07,38;UBERON:0011216,1.74e-07,223;UBERON:0009569,2.42e-07,112;UBERON:0001048,2.78e-07,160;UBERON:0002100,7.40e-07,199 | |||
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| ||
|short_description=p2@CREB3L4 | |short_description=p2@CREB3L4 | ||
}} | }} |
Latest revision as of 07:59, 17 September 2015
Short description: | p2@CREB3L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CREB3L4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477617_5end |
EntrezGene: | CREB3L4 |
HGNC: | 18854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.44e-17 | 253 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.33e-11 | 118 |
trunk region element | 1.63e-11 | 101 |
foregut | 6.89e-11 | 87 |
digestive system | 1.72e-10 | 145 |
digestive tract | 1.72e-10 | 145 |
primitive gut | 1.72e-10 | 145 |
endoderm-derived structure | 4.11e-10 | 160 |
endoderm | 4.11e-10 | 160 |
presumptive endoderm | 4.11e-10 | 160 |
respiratory primordium | 1.37e-07 | 38 |
endoderm of foregut | 1.37e-07 | 38 |
organ system subdivision | 1.74e-07 | 223 |
subdivision of trunk | 2.42e-07 | 112 |
primordium | 2.78e-07 | 160 |
trunk | 7.40e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.50e-30 | 143 |
carcinoma | 3.06e-23 | 106 |
cancer | 4.33e-21 | 235 |
disease of cellular proliferation | 2.53e-20 | 239 |