FFCP PHASE1:Hg19::chr1:1290954..1290971,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54587 | |EntrezGene=54587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7542 | |HGNC=7542 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_ENST00000460473,ENST00000464351_5end | |association_with_transcript=-62bp_to_ENST00000460473,ENST00000464351_5end | ||
|cluster_id=chr1:1290954..1290971,- | |||
|coexpression_cluster_id=C1421 | |||
|description=CAGE_peak_8_at_MXRA8_5end | |description=CAGE_peak_8_at_MXRA8_5end | ||
|id=chr1:1290954..1290971,- | |id=chr1:1290954..1290971,- | ||
|ontology_enrichment_celltype=CL:0000055!1.03e-31!180;CL:0000057!1.72e-21!75;CL:0000183!1.13e-11!59;CL:0000680!1.50e-11!57;CL:0000056!1.50e-11!57;CL:0000355!1.50e-11!57;CL:0002620!2.57e-10!23;CL:0000187!5.65e-10!54;CL:0002334!1.02e-09!12;CL:0000192!1.23e-09!42;CL:0000514!1.23e-09!42;CL:0000048!3.71e-09!430;CL:0000723!9.09e-09!436;CL:0000034!1.98e-08!444;CL:0000393!6.41e-08!60;CL:0000211!6.41e-08!60;CL:0000359!4.43e-07!32;CL:0002371!4.77e-07!591 | |ontology_enrichment_celltype=CL:0000055!1.03e-31!180;CL:0000057!1.72e-21!75;CL:0000183!1.13e-11!59;CL:0000680!1.50e-11!57;CL:0000056!1.50e-11!57;CL:0000355!1.50e-11!57;CL:0002620!2.57e-10!23;CL:0000187!5.65e-10!54;CL:0002334!1.02e-09!12;CL:0000192!1.23e-09!42;CL:0000514!1.23e-09!42;CL:0000048!3.71e-09!430;CL:0000723!9.09e-09!436;CL:0000034!1.98e-08!444;CL:0000393!6.41e-08!60;CL:0000211!6.41e-08!60;CL:0000359!4.43e-07!32;CL:0002371!4.77e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.36e-13;12!CL:0000136;4.98e-09;13!CL:0002579;5.20e-09;3!CL:0002615;8.90e-09;3!CL:0002580;1.44e-08;3!CL:0002559;4.34e-08;5!CL:0002595;1.72e-07;5!CL:0002622;1.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.45e-14,76;CL:0002334,2.36e-13,12;CL:0000136,1.01e-09,15;CL:0000048,1.54e-09,427;CL:0002320,3.12e-09,361;CL:0000723,3.46e-09,433;CL:0002579,4.78e-09,3;CL:0002580,6.85e-09,3;CL:0000034,9.82e-09,441;CL:0002615,1.23e-08,3;CL:0002559,3.52e-08,5;CL:0002622,1.82e-07,3;CL:0002595,2.01e-07,5;CL:0000134,2.04e-07,354;CL:0000499,7.51e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.38e-14!83;UBERON:0002329!3.38e-14!83;UBERON:0003077!3.38e-14!83;UBERON:0003059!3.38e-14!83;UBERON:0007282!3.38e-14!83;UBERON:0009618!3.38e-14!83;UBERON:0007285!3.38e-14!83;UBERON:0004290!2.39e-12!70;UBERON:0005256!2.34e-11!143;UBERON:0002100!3.51e-11!216;UBERON:0001134!1.24e-10!61;UBERON:0002036!1.24e-10!61;UBERON:0003082!1.24e-10!61;UBERON:0000486!3.65e-10!82;UBERON:0002385!6.57e-10!63;UBERON:0001015!6.57e-10!63;UBERON:0000383!6.57e-10!63;UBERON:0000475!1.21e-09!365;UBERON:0002199!1.88e-09!45;UBERON:0002416!1.88e-09!45;UBERON:0003102!3.67e-09!95;UBERON:0002097!1.70e-08!40;UBERON:0004573!2.63e-08!33;UBERON:0004571!2.63e-08!33;UBERON:0003688!1.85e-07!6;UBERON:0002358!1.85e-07!6;UBERON:0003684!1.85e-07!6;UBERON:0001178!1.85e-07!6 | |ontology_enrichment_uberon=UBERON:0000914!3.38e-14!83;UBERON:0002329!3.38e-14!83;UBERON:0003077!3.38e-14!83;UBERON:0003059!3.38e-14!83;UBERON:0007282!3.38e-14!83;UBERON:0009618!3.38e-14!83;UBERON:0007285!3.38e-14!83;UBERON:0004290!2.39e-12!70;UBERON:0005256!2.34e-11!143;UBERON:0002100!3.51e-11!216;UBERON:0001134!1.24e-10!61;UBERON:0002036!1.24e-10!61;UBERON:0003082!1.24e-10!61;UBERON:0000486!3.65e-10!82;UBERON:0002385!6.57e-10!63;UBERON:0001015!6.57e-10!63;UBERON:0000383!6.57e-10!63;UBERON:0000475!1.21e-09!365;UBERON:0002199!1.88e-09!45;UBERON:0002416!1.88e-09!45;UBERON:0003102!3.67e-09!95;UBERON:0002097!1.70e-08!40;UBERON:0004573!2.63e-08!33;UBERON:0004571!2.63e-08!33;UBERON:0003688!1.85e-07!6;UBERON:0002358!1.85e-07!6;UBERON:0003684!1.85e-07!6;UBERON:0001178!1.85e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.36e-18;9!UBERON:0000042;3.36e-18;9!UBERON:0003688;4.31e-16;6!UBERON:0002358;4.31e-16;6!UBERON:0003684;4.31e-16;6!UBERON:0001178;4.31e-16;6!UBERON:0002073;4.34e-08;5!UBERON:0002384;8.89e-08;198!UBERON:0003834;1.72e-07;5!UBERON:0001533;1.72e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.47e-16,6;UBERON:0002358,5.47e-16,6;UBERON:0003684,5.47e-16,6;UBERON:0001178,5.47e-16,6;UBERON:0004457,3.65e-13,12;UBERON:0000042,3.65e-13,12;UBERON:0002384,9.97e-10,371;UBERON:0004923,1.06e-08,66;UBERON:0002073,3.52e-08,5;UBERON:0005086,3.52e-08,5;UBERON:0003834,2.01e-07,5;UBERON:0001533,2.01e-07,5 | |||
|phase1_expression=3.63356758541113,4.06790995392868,4.08767771878316,2.00146596706261,2.23480547213644,2.61701557230111,0,0,1.82829939739887,0.491467873003018,0.697801167972428,0,1.31883489114227,0.866364470720326,0.662794751455832,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0.612002073732759,0.626909442956176,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50668955317945,1.88300474649071,0,0.486634870302636,0.283604451492204,0,0.702678285545008,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.01304409331664,0.264818361626438,1.72101972449288,2.4826786753885,1.12135520028461,0,0.24666754841716,0.311211035399766,0,0,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0.747243402759005,0,0.323745888736263,0.421352420106746,0,0.491337269247072,1.34323515528495,1.18800285728205,3.21447008062124,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0.877955241761676,1.22595118319608,1.05166641234618,0,0.538168907066586,0.85422955527427,0.211931901159562,0.900273288253207,0.515262646192195,0.257640540045629,1.67505170698431,1.5189869901714,1.16924406193438,1.51460264546469,0.552299391853796,1.13152239773168,1.06502877754984,0.906768884048762,0.67824236924195,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,2.57296375277154,1.38134921352481,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0.258543431515556,14.3062578340753,0,0.797814349754612,0,1.28603687131071,0,1.0656887160644,0.285955987316295,1.08524321078289,0,0,0.355391948742546,0,1.20575750823834,0,0.599837947092342,0,0,0,0.239624855491583,1.14861935834114,0,1.01346914667305,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,2.50085260529839,0,1.03985430765404,1.60586089917446,1.57702415033935,0.234282829985426,2.70851489754947,2.27407504055985,4.1389228517002,0,0.737476674166813,0.868836144680828,1.17480694477644,1.71571711905428,0,0,0,0,1.66435439510497,0.604780586659361,4.21783273291921,1.99500565274481,8.41980283299221,3.84417447767103,3.58195074346692,4.50390979202101,0,0.925258162815933,2.48586415438378,0.328508624055237,2.59627214591811,0.813472649219715,0.120859449591622,0,0,1.03333003348146,1.63882051206045,1.44236856455367,0,0,0,0,0.105551628892876,0,0,0.431831832204279,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.41254749960294,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0,0.322260734604821,1.0151168573996,0.170453254832202,0.445160178233687,0.165284915360978,0,0,0,0.929691098594572,1.5740617341532,0,0.616067160352178,1.06461206063404,0,1.11194531462352,0.143124886741991,0,0,0,0.767693373934002,0.855877976067841,1.27281299170375,0.78494864019923,0.179872457583315,0.274537029736055,0.824686816419805,0.202182481573316,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.682499557039929,0.989838023675989,1.13008116620243,1.10273068709225,1.32687795048244,1.75380354101505,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0.354761064070598,2.53329162357197,2.30506425071931,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,1.24415835064723,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0.19871461170299,0,0,0,0.640358984218058,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0.105600336519406,0,0,0,0,0,2.17199840701485,0,1.95952416065645,0,0,1.02232813071253,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.276697269872462,0,0,0,0.235265819698172,0,0.144921028610825,0.447764408660622,0,0,0.947015026375446,1.0062716070103,0,0.228840068396924,0.302461847526478,0.310874401165561,0.443565449968902,0.159296767163702,0.449803112163605,0,0.829412415681711,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.107410557042488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| ||
|short_description=p8@MXRA8 | |short_description=p8@MXRA8 | ||
}} | }} |
Latest revision as of 15:03, 16 September 2015
Short description: | p8@MXRA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MXRA8_5end |
Coexpression cluster: | C1421_Mesenchymal_Preadipocyte_Fibroblast_tenocyte_Adipocyte_Osteoblast_Nucleus |
Association with transcript: | -62bp_to_ENST00000460473, ENST00000464351_5end |
EntrezGene: | MXRA8 |
HGNC: | 7542 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.45e-14 | 76 |
preadipocyte | 2.36e-13 | 12 |
fat cell | 1.01e-09 | 15 |
multi fate stem cell | 1.54e-09 | 427 |
connective tissue cell | 3.12e-09 | 361 |
somatic stem cell | 3.46e-09 | 433 |
omentum preadipocyte | 4.78e-09 | 3 |
preadipocyte of the breast | 6.85e-09 | 3 |
stem cell | 9.82e-09 | 441 |
adipocyte of omentum tissue | 1.23e-08 | 3 |
hair follicle cell | 3.52e-08 | 5 |
prostate stromal cell | 1.82e-07 | 3 |
smooth muscle cell of the subclavian artery | 2.01e-07 | 5 |
mesenchymal cell | 2.04e-07 | 354 |
stromal cell | 7.51e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.47e-16 | 6 |
peritoneum | 5.47e-16 | 6 |
abdominal cavity | 5.47e-16 | 6 |
visceral peritoneum | 5.47e-16 | 6 |
cavity lining | 3.65e-13 | 12 |
serous membrane | 3.65e-13 | 12 |
connective tissue | 9.97e-10 | 371 |
organ component layer | 1.06e-08 | 66 |
hair follicle | 3.52e-08 | 5 |
hair follicle placode | 3.52e-08 | 5 |
thoracic segment blood vessel | 2.01e-07 | 5 |
subclavian artery | 2.01e-07 | 5 |