FFCP PHASE1:Hg19::chr1:114522973..114522995,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:114522973..114522995,+ | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr1:114522973..114522995,+ | |description=CAGE_peak_at_chr1:114522973..114522995,+ | ||
|id=chr1:114522973..114522995,+ | |id=chr1:114522973..114522995,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.47e-15!180;CL:0000057!1.56e-11!75;CL:0000188!4.10e-08!9 | |ontology_enrichment_celltype=CL:0000055!1.47e-15!180;CL:0000057!1.56e-11!75;CL:0000188!4.10e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.62e-23;3!CL:0002536;1.22e-16;2!CL:0000349;4.32e-14;19!CL:0002570;7.16e-09;8!CL:0000228;1.32e-08;1!CL:0002581;1.32e-08;1!CL:0002372;1.32e-08;1!CL:0000188;8.10e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.96e-23,3;CL:0002536,1.27e-16,2;CL:0000349,4.48e-14,19;CL:0002570,6.17e-09,8;CL:0002581,1.05e-08,1;CL:0000228,1.13e-08,1;CL:0002372,1.13e-08,1;CL:0000188,7.91e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.48e-09;1!UBERON:0004874;1.32e-08;1!UBERON:0003099;1.32e-08;1!UBERON:0003852;1.32e-08;1!UBERON:0005795;3.45e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.19e-10;3!DOID:127;1.19e-10;3!DOID:0060072;3.34e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.26e-10,3;DOID:127,1.26e-10,3;DOID:0060072,3.46e-08,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.57e-18;4!UBERON:0000478;7.14e-15;24!UBERON:0005795;5.48e-09;1!UBERON:0000989;1.32e-08;1!UBERON:0005705;1.32e-08;1!UBERON:0008811;1.32e-08;1!UBERON:0008193;1.32e-08;1!UBERON:0010912;1.32e-08;1!UBERON:0002514;1.32e-08;1!UBERON:0003457;1.32e-08;1!UBERON:0008907;1.32e-08;1!UBERON:0008001;1.32e-08;1!UBERON:0007213;1.32e-08;1!UBERON:0009891;1.32e-08;1!UBERON:0007914;1.32e-08;1!UBERON:0007375;1.32e-08;1!UBERON:0003323;1.32e-08;1!UBERON:0010258;1.32e-08;1!UBERON:0005253;1.32e-08;1!UBERON:0007842;1.32e-08;1!UBERON:0002397;1.32e-08;1!UBERON:0003113;1.32e-08;1!UBERON:0003277;1.32e-08;1!UBERON:0001709;1.32e-08;1!UBERON:0002244;1.32e-08;1!UBERON:0005620;1.32e-08;1!UBERON:0010364;1.32e-08;1!UBERON:0004288;1.32e-08;1!UBERON:0001013;1.33e-08;14!UBERON:0001134;1.53e-07;16!UBERON:0002036;1.53e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,9.89e-18,4;UBERON:0004340,9.89e-18,4;UBERON:0000478,7.46e-15,24;UBERON:0005631,1.38e-13,14;UBERON:0000158,1.38e-13,14;UBERON:0005795,8.50e-12,22;UBERON:0003124,2.31e-10,7;UBERON:0000989,9.74e-09,1;UBERON:0008811,9.74e-09,1;UBERON:0006258,9.74e-09,1;UBERON:0005876,9.74e-09,1;UBERON:0004874,9.74e-09,1;UBERON:0000995,9.88e-09,21;UBERON:0001013,1.12e-08,14;UBERON:0005705,2.22e-08,1;UBERON:0008193,2.22e-08,1;UBERON:0010912,2.22e-08,1;UBERON:0002514,2.22e-08,1;UBERON:0003457,2.22e-08,1;UBERON:0008907,2.22e-08,1;UBERON:0008001,2.22e-08,1;UBERON:0007213,2.22e-08,1;UBERON:0009891,2.22e-08,1;UBERON:0007914,2.22e-08,1;UBERON:0009292,2.22e-08,1;UBERON:0003099,2.22e-08,1;UBERON:0007375,2.22e-08,1;UBERON:0003323,2.22e-08,1;UBERON:0010258,2.22e-08,1;UBERON:0007842,2.22e-08,1;UBERON:0009494,2.22e-08,1;UBERON:0010042,2.22e-08,1;UBERON:0010045,2.22e-08,1;UBERON:0010259,2.22e-08,1;UBERON:0010359,2.22e-08,1;UBERON:0009526,2.22e-08,1;UBERON:0002397,2.22e-08,1;UBERON:0003113,2.22e-08,1;UBERON:0003277,2.22e-08,1;UBERON:0001709,2.22e-08,1;UBERON:0004066,2.22e-08,1;UBERON:0002244,2.22e-08,1;UBERON:0005620,2.22e-08,1;UBERON:0004362,2.22e-08,1;UBERON:0010364,2.22e-08,1;UBERON:0010046,2.22e-08,1;UBERON:0005868,2.22e-08,1;UBERON:0007238,2.22e-08,1;UBERON:0004288,2.22e-08,1;UBERON:0004068,2.22e-08,1;UBERON:0010334,2.22e-08,1;UBERON:0003852,2.22e-08,1;UBERON:0010253,2.22e-08,1;UBERON:0003975,2.52e-08,22;UBERON:0004175,2.67e-07,25 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,2.00146596706261,0,0,0,0,0.261185628199839,0,0,7.8638893966862,6.59417445571134,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.14734648299525,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.625592599359821,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0.675105328965065,0.974370051611986,0.252433774244115,0.828449087780694,0,0,0.503760491138201,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,2.71310802695722,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,2.27407504055985,0,0,0.553107505625109,0.0868836144680828,0.783204629850962,1.37257369524342,0,0,0,1.21251028578504,8.32177197552485,6.65258645325297,0,0.306923946576125,0.280660094433074,0.384417447767103,0,0,1.48418066444991,0.925258162815933,0.355123450626254,0.410635780069046,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0.460511024178389,0.137836572484531,1.39646318328756,0.580066775656914,0.255679882248303,1.33548053470106,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.314727528809989,0,0,0,0.714695326373367,0,0,1.08599920350743,0,1.63293680054705,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,1.34329322598187,0.701139929541673,0.554805861502613,0,0.50313580350515,0,0,0,0.932623203496683,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0.800055529326307,2.40376993627955,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.678930119816101,0.212574920101683,0,1.11728983594649,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0.252332849670158,0.327796715891087,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0.665320713092027,0,0,1.9307228228694,0,2.34640942403454,0.366724332548599,2.84827324821017,0.665756774185513,0,0 | |phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,2.00146596706261,0,0,0,0,0.261185628199839,0,0,7.8638893966862,6.59417445571134,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.14734648299525,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.625592599359821,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0.675105328965065,0.974370051611986,0.252433774244115,0.828449087780694,0,0,0.503760491138201,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,2.71310802695722,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,2.27407504055985,0,0,0.553107505625109,0.0868836144680828,0.783204629850962,1.37257369524342,0,0,0,1.21251028578504,8.32177197552485,6.65258645325297,0,0.306923946576125,0.280660094433074,0.384417447767103,0,0,1.48418066444991,0.925258162815933,0.355123450626254,0.410635780069046,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0.460511024178389,0.137836572484531,1.39646318328756,0.580066775656914,0.255679882248303,1.33548053470106,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.314727528809989,0,0,0,0.714695326373367,0,0,1.08599920350743,0,1.63293680054705,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,1.34329322598187,0.701139929541673,0.554805861502613,0,0.50313580350515,0,0,0,0.932623203496683,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0.800055529326307,2.40376993627955,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.678930119816101,0.212574920101683,0,1.11728983594649,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0.252332849670158,0.327796715891087,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0.665320713092027,0,0,1.9307228228694,0,2.34640942403454,0.366724332548599,2.84827324821017,0.665756774185513,0,0 | ||
|short_description=p@chr1:114522973..114522995,+ | |short_description=p@chr1:114522973..114522995,+ | ||
}} | }} |
Latest revision as of 19:57, 27 July 2015
Short description: | p@chr1:114522973..114522995, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:114522973..114522995, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.96e-23 | 3 |
amniotic epithelial cell | 1.27e-16 | 2 |
extraembryonic cell | 4.48e-14 | 19 |
mesenchymal stem cell of adipose | 6.17e-09 | 8 |
perirenal preadipocyte | 1.05e-08 | 1 |
multinucleate cell | 1.13e-08 | 1 |
myotube | 1.13e-08 | 1 |
cell of skeletal muscle | 7.91e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.26e-10 | 3 |
leiomyoma | 1.26e-10 | 3 |
benign neoplasm | 3.46e-08 | 4 |