FFCP PHASE1:Hg19::chr15:35083378..35083389,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:35083378..35083389,+ | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_at_chr15:35083378..35083389,+ | |description=CAGE_peak_at_chr15:35083378..35083389,+ | ||
|id=chr15:35083378..35083389,+ | |id=chr15:35083378..35083389,+ | ||
|ontology_enrichment_celltype=CL:0000188!5.36e-23!9;CL:0002580!8.36e-14!3;CL:0000515!2.82e-10!4;CL:0000680!4.37e-07!57;CL:0000056!4.37e-07!57;CL:0000355!4.37e-07!57;CL:0000594!9.06e-07!3 | |ontology_enrichment_celltype=CL:0000188!5.36e-23!9;CL:0002580!8.36e-14!3;CL:0000515!2.82e-10!4;CL:0000680!4.37e-07!57;CL:0000056!4.37e-07!57;CL:0000355!4.37e-07!57;CL:0000594!9.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.50e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.44e-16;1!UBERON:0010226;2.56e-15;1!UBERON:0004140;2.56e-15;1!UBERON:0005062;6.04e-15;4!UBERON:0007284;6.04e-15;4!UBERON:0003104;1.67e-07;31 | |||
|ontology_enrichment_disease=DOID:114!2.02e-10!2 | |ontology_enrichment_disease=DOID:114!2.02e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:114;4.23e-29;2!DOID:178;2.56e-15;1!DOID:326;2.56e-15;1!DOID:3978;2.56e-15;1!DOID:3394;2.56e-15;1!DOID:5844;2.56e-15;1!DOID:1287;4.39e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.55e-29,2;DOID:178,2.38e-15,1;DOID:326,2.38e-15,1;DOID:3978,2.38e-15,1;DOID:3394,2.38e-15,1;DOID:5844,2.38e-15,1;DOID:1287,4.55e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.20e-10!63;UBERON:0001015!1.20e-10!63;UBERON:0000383!1.20e-10!63;UBERON:0000341!6.02e-10!2;UBERON:0007100!1.03e-09!27;UBERON:0001134!2.05e-09!61;UBERON:0002036!2.05e-09!61;UBERON:0003082!2.05e-09!61;UBERON:0004290!7.29e-08!70;UBERON:0004151!2.59e-07!3;UBERON:0000310!4.07e-07!10;UBERON:0003978!4.08e-07!3;UBERON:0009751!4.08e-07!3;UBERON:0000946!4.08e-07!3;UBERON:0002523!4.08e-07!3;UBERON:0005983!4.08e-07!3;UBERON:0002165!4.08e-07!3;UBERON:0002062!4.08e-07!3;UBERON:0007280!4.08e-07!3 | |ontology_enrichment_uberon=UBERON:0002385!1.20e-10!63;UBERON:0001015!1.20e-10!63;UBERON:0000383!1.20e-10!63;UBERON:0000341!6.02e-10!2;UBERON:0007100!1.03e-09!27;UBERON:0001134!2.05e-09!61;UBERON:0002036!2.05e-09!61;UBERON:0003082!2.05e-09!61;UBERON:0004290!7.29e-08!70;UBERON:0004151!2.59e-07!3;UBERON:0000310!4.07e-07!10;UBERON:0003978!4.08e-07!3;UBERON:0009751!4.08e-07!3;UBERON:0000946!4.08e-07!3;UBERON:0002523!4.08e-07!3;UBERON:0005983!4.08e-07!3;UBERON:0002165!4.08e-07!3;UBERON:0002062!4.08e-07!3;UBERON:0007280!4.08e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.80e-27;25!UBERON:0004151;5.63e-20;3!UBERON:0003978;1.39e-19;3!UBERON:0000946;1.39e-19;3!UBERON:0000948;5.21e-16;22!UBERON:0002079;6.44e-16;1!UBERON:0002084;2.56e-15;1!UBERON:0002135;2.56e-15;1!UBERON:0002146;2.56e-15;1!UBERON:0001389;2.56e-15;1!UBERON:0000026;2.56e-15;1!UBERON:0008784;2.56e-15;1!UBERON:0006058;2.56e-15;1!UBERON:0003663;2.56e-15;1!UBERON:0004256;2.56e-15;1!UBERON:0002082;2.56e-15;1!UBERON:0004708;2.56e-15;1!UBERON:0002101;2.56e-15;1!UBERON:0004709;2.56e-15;1!UBERON:0005623;2.56e-15;1!UBERON:0002529;2.56e-15;1!UBERON:0010538;2.56e-15;1!UBERON:0003661;2.56e-15;1!UBERON:0010890;2.56e-15;1!UBERON:0002471;2.56e-15;1!UBERON:0001383;2.56e-15;1!UBERON:0010758;2.56e-15;1!UBERON:0010707;2.56e-15;1!UBERON:0000978;2.56e-15;1!UBERON:0002103;2.56e-15;1!UBERON:0001665;2.56e-15;1!UBERON:0003823;2.56e-15;1!UBERON:0000154;2.56e-15;1!UBERON:0010709;2.56e-15;1!UBERON:0002081;1.29e-08;2!UBERON:0001134;1.29e-08;16!UBERON:0002036;1.29e-08;16!UBERON:0005090;2.57e-08;2!UBERON:0001630;2.57e-08;2!UBERON:0002133;2.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.04e-25,27;UBERON:0004151,4.43e-20,3;UBERON:0003978,1.85e-19,3;UBERON:0009751,1.85e-19,3;UBERON:0000946,1.85e-19,3;UBERON:0002523,1.85e-19,3;UBERON:0005983,1.85e-19,3;UBERON:0002165,1.85e-19,3;UBERON:0002062,1.85e-19,3;UBERON:0007280,1.85e-19,3;UBERON:0002079,6.44e-16,1;UBERON:0002084,1.78e-15,1;UBERON:0002082,1.78e-15,1;UBERON:0010226,1.78e-15,1;UBERON:0002135,2.75e-15,1;UBERON:0005418,3.17e-15,1;UBERON:0001389,3.17e-15,1;UBERON:0000026,3.17e-15,1;UBERON:0008784,3.17e-15,1;UBERON:0006058,3.17e-15,1;UBERON:0003663,3.17e-15,1;UBERON:0004256,3.17e-15,1;UBERON:0004708,3.17e-15,1;UBERON:0002101,3.17e-15,1;UBERON:0004709,3.17e-15,1;UBERON:0002529,3.17e-15,1;UBERON:0010538,3.17e-15,1;UBERON:0003661,3.17e-15,1;UBERON:0010890,3.17e-15,1;UBERON:0002471,3.17e-15,1;UBERON:0001383,3.17e-15,1;UBERON:0004357,3.17e-15,1;UBERON:0004347,3.17e-15,1;UBERON:0005420,3.17e-15,1;UBERON:0005732,3.17e-15,1;UBERON:0010758,3.17e-15,1;UBERON:0010707,3.17e-15,1;UBERON:0000978,3.17e-15,1;UBERON:0002103,3.17e-15,1;UBERON:0001665,3.17e-15,1;UBERON:0003823,3.17e-15,1;UBERON:0000154,3.17e-15,1;UBERON:0010709,3.17e-15,1;UBERON:0005733,3.17e-15,1;UBERON:0005730,3.17e-15,1;UBERON:0002146,3.66e-15,1;UBERON:0005623,3.66e-15,1;UBERON:0000948,1.08e-14,24;UBERON:0005498,1.08e-14,24;UBERON:0004140,1.08e-14,24;UBERON:0009881,1.08e-14,24;UBERON:0004141,1.08e-14,24;UBERON:0003084,1.08e-14,24;UBERON:0007005,1.08e-14,24;UBERON:0004139,1.08e-14,24;UBERON:0004291,1.08e-14,24;UBERON:0003103,1.16e-09,68;UBERON:0004797,6.83e-09,7;UBERON:0002081,1.29e-08,2;UBERON:0010227,1.29e-08,2;UBERON:0002133,2.67e-08,2;UBERON:0005090,2.87e-08,2;UBERON:0001630,2.87e-08,2 | |||
|phase1_expression=0,0.214100523890983,0,3.00219895059391,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43143423810856,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.921022048356777,0.275673144969061,0,0.580066775656914,0.255679882248303,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.14580212005842,0,1.39775300349294,2.14613024068285,0.223171457441873,1.5452198671947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86164859010704,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20063858725253,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,4.6392577253528,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,3.00219895059391,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43143423810856,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.921022048356777,0.275673144969061,0,0.580066775656914,0.255679882248303,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.14580212005842,0,1.39775300349294,2.14613024068285,0.223171457441873,1.5452198671947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86164859010704,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20063858725253,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,4.6392577253528,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr15:35083378..35083389,+ | |short_description=p@chr15:35083378..35083389,+ | ||
}} | }} |
Latest revision as of 00:59, 25 July 2015
Short description: | p@chr15:35083378..35083389, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:35083378..35083389, + |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.55e-29 | 2 |
vascular disease | 2.38e-15 | 1 |
ischemia | 2.38e-15 | 1 |
extrinsic cardiomyopathy | 2.38e-15 | 1 |
myocardial ischemia | 2.38e-15 | 1 |
myocardial infarction | 2.38e-15 | 1 |
cardiovascular system disease | 4.55e-15 | 4 |