FFCP PHASE1:Hg19::chr9:139907627..139907638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHE2 | |UniProt=E9PHE2 | ||
|association_with_transcript=-12bp_to_ENST00000398210_5end | |association_with_transcript=-12bp_to_ENST00000398210_5end | ||
|cluster_id=chr9:139907627..139907638,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_28_at_ABCA2_5end | |description=CAGE_peak_28_at_ABCA2_5end | ||
|id=chr9:139907627..139907638,- | |id=chr9:139907627..139907638,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.81e-20;1!UBERON:0003056;1.87e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005162;3.59e-37;2!UBERON:0000122;3.59e-37;2!UBERON:0002771;9.82e-37;2!UBERON:0002038;9.81e-20;1!UBERON:0000941;9.81e-20;1!UBERON:0001785;9.81e-20;1!UBERON:0002464;9.81e-20;1!UBERON:0004904;9.81e-20;1!UBERON:0001021;9.81e-20;1!UBERON:0009661;9.81e-20;1!UBERON:0002950;9.81e-20;1!UBERON:0001891;9.81e-20;1!UBERON:0002336;2.71e-19;1!UBERON:0011215;2.71e-19;1!UBERON:0001018;2.71e-19;1!UBERON:0002473;2.71e-19;1!UBERON:0005340;2.71e-19;1!UBERON:0003544;2.71e-19;1!UBERON:0005970;2.71e-19;1!UBERON:0002316;2.71e-19;1!UBERON:0001020;2.71e-19;1!UBERON:0002437;2.71e-19;1!UBERON:0000073;5.44e-18;53!UBERON:0002616;5.44e-18;53!UBERON:0002780;7.70e-16;41!UBERON:0001890;7.70e-16;41!UBERON:0001893;1.44e-14;34!UBERON:0000200;5.76e-13;6!UBERON:0009663;2.24e-11;7!UBERON:0001871;2.98e-11;6!UBERON:0002791;9.75e-11;32!UBERON:0003714;1.50e-10;2!UBERON:0001897;2.48e-10;2!UBERON:0001954;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0003022;2.48e-10;2!UBERON:0002421;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0002600;2.48e-10;2!UBERON:0003528;6.18e-10;34!UBERON:0002020;6.18e-10;34!UBERON:0002420;4.70e-09;9!UBERON:0000125;4.70e-09;9!UBERON:0007245;4.70e-09;9!UBERON:0002308;4.70e-09;9!UBERON:0010009;4.70e-09;9!UBERON:0010011;4.70e-09;9!UBERON:0000454;4.70e-09;9!UBERON:0002619;1.16e-07;22!UBERON:0000955;1.48e-07;68!UBERON:0001016;2.32e-07;83!UBERON:0001896;2.63e-07;3!UBERON:0002114;2.63e-07;2!UBERON:0005290;2.63e-07;3!UBERON:0001869;2.70e-07;32!UBERON:0000956;7.71e-07;25!UBERON:0000203;7.71e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.89e-37,2;UBERON:0000122,1.89e-37,2;UBERON:0002771,1.42e-36,2;UBERON:0000073,6.29e-21,53;UBERON:0002616,6.29e-21,53;UBERON:0002780,8.80e-21,41;UBERON:0001890,8.80e-21,41;UBERON:0003080,8.80e-21,41;UBERON:0006240,8.80e-21,41;UBERON:0001049,8.30e-20,56;UBERON:0005068,8.30e-20,56;UBERON:0006241,8.30e-20,56;UBERON:0007135,8.30e-20,56;UBERON:0000941,8.95e-20,1;UBERON:0001785,8.95e-20,1;UBERON:0002464,8.95e-20,1;UBERON:0004904,8.95e-20,1;UBERON:0001021,8.95e-20,1;UBERON:0003902,8.95e-20,1;UBERON:0005425,8.95e-20,1;UBERON:0002038,1.08e-19,1;UBERON:0009661,1.08e-19,1;UBERON:0002950,1.08e-19,1;UBERON:0001891,1.08e-19,1;UBERON:0009616,1.08e-19,1;UBERON:0010286,1.08e-19,1;UBERON:0002336,1.56e-19,1;UBERON:0011215,1.56e-19,1;UBERON:0001018,1.56e-19,1;UBERON:0002473,1.56e-19,1;UBERON:0005340,1.56e-19,1;UBERON:0003544,1.56e-19,1;UBERON:0005970,1.56e-19,1;UBERON:0002316,1.56e-19,1;UBERON:0001020,1.56e-19,1;UBERON:0002437,1.56e-19,1;UBERON:0001893,1.89e-18,34;UBERON:0003056,2.92e-18,61;UBERON:0003075,4.23e-17,82;UBERON:0007284,4.23e-17,82;UBERON:0002346,2.73e-16,86;UBERON:0000955,4.67e-16,68;UBERON:0006238,4.67e-16,68;UBERON:0001016,2.24e-15,89;UBERON:0002791,9.03e-14,32;UBERON:0001017,1.79e-13,81;UBERON:0010371,2.10e-13,104;UBERON:0003528,5.44e-13,34;UBERON:0002020,5.44e-13,34;UBERON:0000200,6.50e-13,6;UBERON:0007023,2.67e-12,114;UBERON:0009663,2.07e-11,7;UBERON:0001871,3.30e-11,6;UBERON:0003714,1.43e-10,2;UBERON:0001897,1.72e-10,2;UBERON:0010225,1.72e-10,2;UBERON:0010314,1.87e-10,132;UBERON:0001875,2.07e-10,2;UBERON:0006514,2.07e-10,2;UBERON:0001954,2.49e-10,2;UBERON:0003022,2.49e-10,2;UBERON:0002421,2.49e-10,2;UBERON:0002600,2.49e-10,2;UBERON:0002420,4.43e-09,9;UBERON:0000125,4.43e-09,9;UBERON:0007245,4.43e-09,9;UBERON:0002308,4.43e-09,9;UBERON:0010009,4.43e-09,9;UBERON:0010011,4.43e-09,9;UBERON:0000454,4.43e-09,9;UBERON:0001869,4.62e-09,32;UBERON:0004121,7.86e-08,171;UBERON:0000924,7.86e-08,171;UBERON:0006601,7.86e-08,171;UBERON:0002619,1.22e-07,22;UBERON:0011216,2.82e-07,223;UBERON:0001896,2.97e-07,3;UBERON:0005290,2.97e-07,3;UBERON:0010096,2.97e-07,3;UBERON:0002114,3.35e-07,2;UBERON:0000956,8.04e-07,25;UBERON:0000203,8.04e-07,25 | |||
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| ||
|short_description=p28@ABCA2 | |short_description=p28@ABCA2 | ||
}} | }} |
Latest revision as of 15:02, 16 September 2015
Short description: | p28@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -12bp_to_ENST00000398210_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | E9PHE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.79e-07 | 3 |