FFCP PHASE1:Hg19::chr16:88871163..88871187,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:88871163..88871187,+
|short_description=p4@CDT1
|description=CAGE_peak_4_at_CDT1_5end
|association_with_transcript=-36bp_to_AF070552_5end
|EntrezGene=816...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81620 | |EntrezGene=81620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24576 | |HGNC=24576 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H211 | |UniProt=Q9H211 | ||
|association_with_transcript=-36bp_to_AF070552_5end | |||
|cluster_id=chr16:88871163..88871187,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_4_at_CDT1_5end | |||
|id=chr16:88871163..88871187,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;8.96e-09;3!CL:0000083;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,8.96e-09,3;CL:0000083,8.14e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.47e-07!22;DOID:2994!1.47e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:4074;2.59e-12;2!DOID:4905;2.59e-12;2!DOID:3498;2.59e-12;2!DOID:1793;8.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.32e-12,2;DOID:4905,2.32e-12,2;DOID:3498,2.32e-12,2;DOID:1793,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002780!6.28e-25!41;UBERON:0001890!6.28e-25!41;UBERON:0006240!6.28e-25!41;UBERON:0003080!4.26e-24!42;UBERON:0001049!2.11e-22!57;UBERON:0005068!2.11e-22!57;UBERON:0006241!2.11e-22!57;UBERON:0007135!2.11e-22!57;UBERON:0001017!4.33e-21!82;UBERON:0005743!1.32e-20!86;UBERON:0002616!1.00e-19!59;UBERON:0002346!1.30e-19!90;UBERON:0003056!1.90e-19!61;UBERON:0001893!3.41e-19!34;UBERON:0000955!1.01e-18!69;UBERON:0006238!1.01e-18!69;UBERON:0000073!1.61e-18!94;UBERON:0001016!1.61e-18!94;UBERON:0002791!4.77e-18!33;UBERON:0003075!9.37e-18!86;UBERON:0007284!9.37e-18!86;UBERON:0002020!1.62e-17!34;UBERON:0003528!1.62e-17!34;UBERON:0001869!2.62e-17!32;UBERON:0000033!2.85e-15!123;UBERON:0000153!2.91e-15!129;UBERON:0007811!2.91e-15!129;UBERON:0001950!2.27e-14!20;UBERON:0002619!2.70e-14!22;UBERON:0000924!1.84e-13!173;UBERON:0006601!1.84e-13!173;UBERON:0004121!4.23e-12!169;UBERON:0000956!4.95e-12!25;UBERON:0000203!4.95e-12!25;UBERON:0007023!2.07e-11!115;UBERON:0002420!1.96e-09!9;UBERON:0007245!1.96e-09!9;UBERON:0010009!1.96e-09!9;UBERON:0010011!1.96e-09!9;UBERON:0000454!1.96e-09!9;UBERON:0000200!2.57e-08!6;UBERON:0001872!6.97e-08!5;UBERON:0001894!2.15e-07!7;UBERON:0006222!2.15e-07!7;UBERON:0003296!3.22e-07!4;UBERON:0010133!3.22e-07!4;UBERON:0002308!4.09e-07!9;UBERON:0000125!4.09e-07!9;UBERON:0009663!5.50e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.28e-23;1!UBERON:0000007;2.59e-12;2!UBERON:0001875;2.59e-12;2!UBERON:0006514;2.59e-12;2!UBERON:0002190;8.96e-09;3!UBERON:0000988;1.21e-08;3!UBERON:0003296;8.61e-07;4!UBERON:0010133;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.10e-23,1;UBERON:0000007,1.85e-12,2;UBERON:0001875,2.59e-12,2;UBERON:0006514,2.59e-12,2;UBERON:0002190,8.96e-09,3;UBERON:0000988,1.51e-08,3;UBERON:0000955,5.20e-08,68;UBERON:0006238,5.20e-08,68;UBERON:0000073,6.72e-07,53;UBERON:0002616,6.72e-07,53;UBERON:0003296,7.27e-07,4;UBERON:0010133,7.27e-07,4;UBERON:0001017,9.07e-07,81 | |||
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| ||
|short_description=p4@CDT1 | |||
}} | }} |
Latest revision as of 10:18, 18 September 2015
Short description: | p4@CDT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDT1_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -36bp_to_AF070552_5end |
EntrezGene: | CDT1 |
HGNC: | 24576 |
UniProt: | Q9H211 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 8.96e-09 | 3 |
epithelial cell of pancreas | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.10e-23 | 1 |
pituitary gland | 1.85e-12 | 2 |
globus pallidus | 2.59e-12 | 2 |
pallidum | 2.59e-12 | 2 |
subcutaneous adipose tissue | 8.96e-09 | 3 |
pons | 1.51e-08 | 3 |
brain | 5.20e-08 | 68 |
future brain | 5.20e-08 | 68 |
regional part of nervous system | 6.72e-07 | 53 |
regional part of brain | 6.72e-07 | 53 |
gland of diencephalon | 7.27e-07 | 4 |
neuroendocrine gland | 7.27e-07 | 4 |
central nervous system | 9.07e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.32e-12 | 2 |
pancreatic carcinoma | 2.32e-12 | 2 |
pancreatic ductal adenocarcinoma | 2.32e-12 | 2 |
pancreatic cancer | 8.14e-07 | 4 |