FFCP PHASE1:Hg19::chr8:57354251..57354262,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57354251..57354262,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354251..57354262,- | |description=CAGE_peak_at_chr8:57354251..57354262,- | ||
|id=chr8:57354251..57354262,- | |id=chr8:57354251..57354262,- | ||
|ontology_enrichment_celltype=CL:0000667!1.19e-15!6;CL:0000058!1.19e-15!6;CL:0000138!1.19e-15!6;CL:0000153!1.12e-14!9;CL:0000447!1.12e-14!9;CL:0000135!3.67e-12!3;CL:0000386!3.67e-12!3;CL:0000388!3.67e-12!3;CL:0000499!6.18e-12!27;CL:0000327!3.56e-09!14 | |ontology_enrichment_celltype=CL:0000667!1.19e-15!6;CL:0000058!1.19e-15!6;CL:0000138!1.19e-15!6;CL:0000153!1.12e-14!9;CL:0000447!1.12e-14!9;CL:0000135!3.67e-12!3;CL:0000386!3.67e-12!3;CL:0000388!3.67e-12!3;CL:0000499!6.18e-12!27;CL:0000327!3.56e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.63e-17;9!CL:0000447;1.63e-17;9!CL:0000138;2.71e-15;6!CL:0002556;4.59e-15;6!CL:0000135;1.20e-13;3!CL:0000388;1.20e-13;3!CL:0000499;5.55e-12;28!CL:0000327;1.35e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.50e-17,9;CL:0000447,1.50e-17,9;CL:0000058,2.58e-15,6;CL:0000138,2.58e-15,6;CL:0002556,4.60e-15,6;CL:0000135,9.00e-14,3;CL:0000388,9.00e-14,3;CL:0000499,4.88e-12,28;CL:0000327,1.29e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.01e-19;2!UBERON:0003099;2.53e-11;1!UBERON:0003852;2.53e-11;1!UBERON:0006222;4.15e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!3.51e-15!4;UBERON:0002435!3.51e-15!4;UBERON:0000204!3.51e-15!4;UBERON:0010082!3.51e-15!4;UBERON:0005383!3.41e-12!3;UBERON:0005382!3.41e-12!3;UBERON:0000043!3.67e-12!3;UBERON:0002308!6.88e-10!9;UBERON:0000125!6.88e-10!9;UBERON:0009663!1.09e-08!7;UBERON:0001873!1.24e-08!2;UBERON:0010122!1.24e-08!2;UBERON:0002420!9.39e-07!9;UBERON:0007245!9.39e-07!9;UBERON:0010009!9.39e-07!9;UBERON:0010011!9.39e-07!9;UBERON:0000454!9.39e-07!9 | |ontology_enrichment_uberon=UBERON:0000369!3.51e-15!4;UBERON:0002435!3.51e-15!4;UBERON:0000204!3.51e-15!4;UBERON:0010082!3.51e-15!4;UBERON:0005383!3.41e-12!3;UBERON:0005382!3.41e-12!3;UBERON:0000043!3.67e-12!3;UBERON:0002308!6.88e-10!9;UBERON:0000125!6.88e-10!9;UBERON:0009663!1.09e-08!7;UBERON:0001873!1.24e-08!2;UBERON:0010122!1.24e-08!2;UBERON:0002420!9.39e-07!9;UBERON:0007245!9.39e-07!9;UBERON:0010009!9.39e-07!9;UBERON:0010011!9.39e-07!9;UBERON:0000454!9.39e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;6.58e-29;3!UBERON:0005382;6.58e-29;3!UBERON:0000369;7.37e-22;4!UBERON:0002435;7.37e-22;4!UBERON:0000204;7.37e-22;4!UBERON:0001873;1.01e-19;2!UBERON:0001758;4.59e-15;6!UBERON:0003672;4.59e-15;6!UBERON:0011137;2.25e-14;11!UBERON:0010323;2.25e-14;11!UBERON:0007846;1.20e-13;3!UBERON:0000043;1.20e-13;3!UBERON:0007845;1.20e-13;3!UBERON:0003129;5.39e-13;7!UBERON:0009663;9.31e-13;7!UBERON:0005705;2.53e-11;1!UBERON:0008193;2.53e-11;1!UBERON:0010912;2.53e-11;1!UBERON:0002514;2.53e-11;1!UBERON:0003457;2.53e-11;1!UBERON:0008907;2.53e-11;1!UBERON:0008001;2.53e-11;1!UBERON:0007213;2.53e-11;1!UBERON:0009891;2.53e-11;1!UBERON:0007914;2.53e-11;1!UBERON:0007375;2.53e-11;1!UBERON:0003323;2.53e-11;1!UBERON:0010258;2.53e-11;1!UBERON:0005253;2.53e-11;1!UBERON:0007842;2.53e-11;1!UBERON:0002397;2.53e-11;1!UBERON:0003113;2.53e-11;1!UBERON:0003277;2.53e-11;1!UBERON:0001709;2.53e-11;1!UBERON:0002244;2.53e-11;1!UBERON:0005620;2.53e-11;1!UBERON:0010364;2.53e-11;1!UBERON:0004288;2.53e-11;1!UBERON:0001874;5.57e-11;1!UBERON:0002420;4.81e-10;9!UBERON:0000125;4.81e-10;9!UBERON:0007245;4.81e-10;9!UBERON:0002308;4.81e-10;9!UBERON:0010009;4.81e-10;9!UBERON:0010011;4.81e-10;9!UBERON:0000454;4.81e-10;9!UBERON:0000075;6.07e-10;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,8.36e-29,3;UBERON:0005382,8.36e-29,3;UBERON:0000369,8.82e-22,4;UBERON:0002435,8.82e-22,4;UBERON:0000204,8.82e-22,4;UBERON:0010082,8.82e-22,4;UBERON:0001873,1.16e-19,2;UBERON:0010122,1.16e-19,2;UBERON:0001758,4.60e-15,6;UBERON:0003672,4.60e-15,6;UBERON:0010323,2.25e-14,11;UBERON:0007846,9.00e-14,3;UBERON:0000043,9.00e-14,3;UBERON:0007845,9.00e-14,3;UBERON:0003129,5.39e-13,7;UBERON:0009663,1.03e-12,7;UBERON:0011137,2.44e-11,14;UBERON:0005705,2.53e-11,1;UBERON:0008193,2.53e-11,1;UBERON:0010912,2.53e-11,1;UBERON:0002514,2.53e-11,1;UBERON:0003457,2.53e-11,1;UBERON:0008907,2.53e-11,1;UBERON:0008001,2.53e-11,1;UBERON:0007213,2.53e-11,1;UBERON:0009891,2.53e-11,1;UBERON:0007914,2.53e-11,1;UBERON:0009292,2.53e-11,1;UBERON:0003099,2.53e-11,1;UBERON:0007375,2.53e-11,1;UBERON:0003323,2.53e-11,1;UBERON:0010258,2.53e-11,1;UBERON:0007842,2.53e-11,1;UBERON:0009494,2.53e-11,1;UBERON:0010042,2.53e-11,1;UBERON:0010045,2.53e-11,1;UBERON:0010259,2.53e-11,1;UBERON:0010359,2.53e-11,1;UBERON:0009526,2.53e-11,1;UBERON:0002397,2.53e-11,1;UBERON:0003113,2.53e-11,1;UBERON:0003277,2.53e-11,1;UBERON:0001709,2.53e-11,1;UBERON:0004066,2.53e-11,1;UBERON:0002244,2.53e-11,1;UBERON:0005620,2.53e-11,1;UBERON:0004362,2.53e-11,1;UBERON:0010364,2.53e-11,1;UBERON:0010046,2.53e-11,1;UBERON:0005868,2.53e-11,1;UBERON:0007238,2.53e-11,1;UBERON:0004288,2.53e-11,1;UBERON:0004068,2.53e-11,1;UBERON:0010334,2.53e-11,1;UBERON:0003852,2.53e-11,1;UBERON:0010253,2.53e-11,1;UBERON:0001874,6.14e-11,1;UBERON:0002420,5.20e-10,9;UBERON:0000125,5.20e-10,9;UBERON:0007245,5.20e-10,9;UBERON:0002308,5.20e-10,9;UBERON:0010009,5.20e-10,9;UBERON:0010011,5.20e-10,9;UBERON:0000454,5.20e-10,9;UBERON:0000075,6.07e-10,16;UBERON:0000165,3.36e-08,29;UBERON:0000930,3.36e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,8.40109809972778,3.9764297352555,18.0054902011975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.368502951935304,0,0,1.7308685049499,0,0,0,0,0,3.95079858792754,5.21029252858333,2.70428506031874,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0.664225598535437,4.42486004500088,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74439925886963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.20596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,4.2167600230561,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.74627401443437,0,0,0.189403005275089,0.754703705257725,0.889811221596536,0,0.151230923763239,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48802444071178,0,1.67593475391973,0,0,0,26.4506957768013,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,3.14231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01651473835064,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83593523616777,1.84870251452567,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0.714193294391221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,8.40109809972778,3.9764297352555,18.0054902011975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.368502951935304,0,0,1.7308685049499,0,0,0,0,0,3.95079858792754,5.21029252858333,2.70428506031874,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0.664225598535437,4.42486004500088,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74439925886963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.20596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,4.2167600230561,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.74627401443437,0,0,0.189403005275089,0.754703705257725,0.889811221596536,0,0.151230923763239,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48802444071178,0,1.67593475391973,0,0,0,26.4506957768013,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,3.14231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01651473835064,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83593523616777,1.84870251452567,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0.714193294391221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:57354251..57354262,- | |short_description=p@chr8:57354251..57354262,- | ||
}} | }} |
Latest revision as of 19:02, 31 July 2015
Short description: | p@chr8:57354251..57354262, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354251..57354262, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.50e-17 | 9 |
carbohydrate secreting cell | 1.50e-17 | 9 |
chondroblast | 2.58e-15 | 6 |
chondrocyte | 2.58e-15 | 6 |
fibroblast of periodontium | 4.60e-15 | 6 |
fibrocyte | 9.00e-14 | 3 |
tendon cell | 9.00e-14 | 3 |
stromal cell | 4.88e-12 | 28 |
extracellular matrix secreting cell | 1.29e-10 | 15 |