FFCP PHASE1:Hg19::chr8:21911140..21911149,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2039 | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |HGNC=3382 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJ61,Q08495 | |UniProt=E5RJ61,Q08495 | ||
|association_with_transcript=59bp_to_ENST00000381470,ENST00000519850,NM_001114137,uc010ltl.2_5end | |association_with_transcript=59bp_to_ENST00000381470,ENST00000519850,NM_001114137,uc010ltl.2_5end | ||
|cluster_id=chr8:21911140..21911149,+ | |||
|coexpression_cluster_id=C786 | |||
|description=CAGE_peak_40_at_EPB49_5end | |description=CAGE_peak_40_at_EPB49_5end | ||
|id=chr8:21911140..21911149,+ | |id=chr8:21911140..21911149,+ | ||
|ontology_enrichment_celltype=CL:0000239!7.36e-12!3;CL:1000615!7.36e-12!3;CL:0002306!7.36e-12!3;CL:0000181!9.69e-12!12;CL:0000417!9.69e-12!12;CL:0000668!9.69e-12!12;CL:0000414!9.69e-12!12;CL:0000412!9.69e-12!12;CL:0000182!9.69e-12!12;CL:0000313!1.91e-09!1;CL:0002322!2.16e-07!5 | |ontology_enrichment_celltype=CL:0000239!7.36e-12!3;CL:1000615!7.36e-12!3;CL:0002306!7.36e-12!3;CL:0000181!9.69e-12!12;CL:0000417!9.69e-12!12;CL:0000668!9.69e-12!12;CL:0000414!9.69e-12!12;CL:0000412!9.69e-12!12;CL:0000182!9.69e-12!12;CL:0000313!1.91e-09!1;CL:0002322!2.16e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.61e-33;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.83e-33,12;CL:0000223,2.95e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.57e-56;11!UBERON:0009497;1.27e-47;13!UBERON:0003104;3.11e-39;31!UBERON:0001041;6.74e-21;30!UBERON:0003918;6.60e-11;10!UBERON:0007687;6.60e-11;10 | |||
|ontology_enrichment_disease=DOID:2152!1.91e-09!1 | |ontology_enrichment_disease=DOID:2152!1.91e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:7;6.06e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.32e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.10e-20!55;UBERON:0005173!5.10e-20!55;UBERON:0002417!7.51e-18!61;UBERON:0000916!7.51e-18!61;UBERON:0002107!9.29e-16!19;UBERON:0006925!9.29e-16!19;UBERON:0008836!9.29e-16!19;UBERON:0008835!1.51e-13!22;UBERON:0003894!1.51e-13!22;UBERON:0009854!6.14e-13!23;UBERON:0007499!7.27e-12!25;UBERON:0009497!7.27e-12!25;UBERON:0000015!7.27e-12!25;UBERON:0002423!7.27e-12!25;UBERON:0006235!7.27e-12!25;UBERON:0004161!7.27e-12!25;UBERON:0006853!7.36e-12!3;UBERON:0007685!7.36e-12!3;UBERON:0004134!7.36e-12!3;UBERON:0005057!2.17e-11!26;UBERON:0009856!2.17e-11!26;UBERON:0002368!4.32e-11!35;UBERON:0002113!1.09e-10!27;UBERON:0003918!1.09e-10!27;UBERON:0005095!1.09e-10!27;UBERON:0007687!1.09e-10!27;UBERON:0001301!1.25e-09!1;UBERON:0002365!1.79e-09!31;UBERON:0002330!1.79e-09!31;UBERON:0004911!1.91e-09!1;UBERON:0005177!2.68e-09!107;UBERON:0003929!5.85e-09!54;UBERON:0000489!6.06e-09!32;UBERON:0009569!1.07e-08!113;UBERON:0000949!1.88e-08!45 | |ontology_enrichment_uberon=UBERON:0005172!5.10e-20!55;UBERON:0005173!5.10e-20!55;UBERON:0002417!7.51e-18!61;UBERON:0000916!7.51e-18!61;UBERON:0002107!9.29e-16!19;UBERON:0006925!9.29e-16!19;UBERON:0008836!9.29e-16!19;UBERON:0008835!1.51e-13!22;UBERON:0003894!1.51e-13!22;UBERON:0009854!6.14e-13!23;UBERON:0007499!7.27e-12!25;UBERON:0009497!7.27e-12!25;UBERON:0000015!7.27e-12!25;UBERON:0002423!7.27e-12!25;UBERON:0006235!7.27e-12!25;UBERON:0004161!7.27e-12!25;UBERON:0006853!7.36e-12!3;UBERON:0007685!7.36e-12!3;UBERON:0004134!7.36e-12!3;UBERON:0005057!2.17e-11!26;UBERON:0009856!2.17e-11!26;UBERON:0002368!4.32e-11!35;UBERON:0002113!1.09e-10!27;UBERON:0003918!1.09e-10!27;UBERON:0005095!1.09e-10!27;UBERON:0007687!1.09e-10!27;UBERON:0001301!1.25e-09!1;UBERON:0002365!1.79e-09!31;UBERON:0002330!1.79e-09!31;UBERON:0004911!1.91e-09!1;UBERON:0005177!2.68e-09!107;UBERON:0003929!5.85e-09!54;UBERON:0000489!6.06e-09!32;UBERON:0009569!1.07e-08!113;UBERON:0000949!1.88e-08!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.51e-33;19!UBERON:0006925;9.51e-33;19!UBERON:0002423;5.36e-25;25!UBERON:0002365;9.70e-19;31!UBERON:0002330;9.70e-19;31!UBERON:0002368;5.20e-18;33!UBERON:0005172;3.52e-15;52!UBERON:0005173;3.52e-15;52!UBERON:0002417;9.08e-14;58!UBERON:0000916;9.08e-14;58!UBERON:0000949;8.57e-12;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.21e-33,19;UBERON:0006925,9.21e-33,19;UBERON:0008836,9.21e-33,19;UBERON:0008835,2.33e-28,22;UBERON:0003894,2.33e-28,22;UBERON:0009854,3.82e-27,23;UBERON:0007499,5.23e-25,25;UBERON:0009497,5.23e-25,25;UBERON:0000015,5.23e-25,25;UBERON:0002423,5.23e-25,25;UBERON:0006235,5.23e-25,25;UBERON:0004161,5.23e-25,25;UBERON:0009856,4.62e-24,26;UBERON:0005172,1.83e-22,54;UBERON:0005173,1.83e-22,54;UBERON:0002365,3.03e-20,31;UBERON:0002330,3.03e-20,31;UBERON:0002417,3.12e-20,60;UBERON:0000916,3.12e-20,60;UBERON:0002368,5.68e-18,35;UBERON:0000949,4.76e-14,45;UBERON:0005177,4.78e-12,101;UBERON:0003929,9.42e-12,54;UBERON:0009569,7.30e-11,112;UBERON:0002530,8.91e-11,59;UBERON:0005911,8.31e-08,82;UBERON:0003104,1.39e-07,160;UBERON:0009142,1.39e-07,160;UBERON:0001041,2.29e-07,87 | |||
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|short_description=p40@EPB49 | |short_description=p40@EPB49 | ||
}} | }} |
Latest revision as of 09:38, 17 September 2015
Short description: | p40@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_EPB49_5end |
Coexpression cluster: | C786_liver_hepatocellular_placenta_hepatoblastoma_normal_Intestinal_Wilms |
Association with transcript: | 59bp_to_ENST00000381470, ENST00000519850, NM_001114137, uc010ltl.2_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | E5RJ61Q08495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.83e-33 | 12 |
endodermal cell | 2.95e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.21e-33 | 19 |
digestive gland | 9.21e-33 | 19 |
liver bud | 9.21e-33 | 19 |
hepatic diverticulum | 2.33e-28 | 22 |
liver primordium | 2.33e-28 | 22 |
digestive tract diverticulum | 3.82e-27 | 23 |
epithelial sac | 5.23e-25 | 25 |
epithelium of foregut-midgut junction | 5.23e-25 | 25 |
anatomical boundary | 5.23e-25 | 25 |
hepatobiliary system | 5.23e-25 | 25 |
foregut-midgut junction | 5.23e-25 | 25 |
septum transversum | 5.23e-25 | 25 |
sac | 4.62e-24 | 26 |
abdomen element | 1.83e-22 | 54 |
abdominal segment element | 1.83e-22 | 54 |
exocrine gland | 3.03e-20 | 31 |
exocrine system | 3.03e-20 | 31 |
abdominal segment of trunk | 3.12e-20 | 60 |
abdomen | 3.12e-20 | 60 |
endocrine gland | 5.68e-18 | 35 |
endocrine system | 4.76e-14 | 45 |
trunk region element | 4.78e-12 | 101 |
gut epithelium | 9.42e-12 | 54 |
subdivision of trunk | 7.30e-11 | 112 |
gland | 8.91e-11 | 59 |
endo-epithelium | 8.31e-08 | 82 |
mesenchyme | 1.39e-07 | 160 |
entire embryonic mesenchyme | 1.39e-07 | 160 |
foregut | 2.29e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.32e-10 | 39 |