FFCP PHASE1:Hg19::chr10:18580269..18580290,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:18580269..18580290,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr10:18580269..18580290,+ | |description=CAGE_peak_at_chr10:18580269..18580290,+ | ||
|id=chr10:18580269..18580290,+ | |id=chr10:18580269..18580290,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.07e-27!2;CL:0000167!1.23e-14!1;CL:0000164!1.23e-14!1;CL:0000502!1.23e-14!1;CL:0000172!1.23e-14!1;CL:0000173!1.23e-14!1;CL:0002351!1.23e-14!1;CL:0000312!1.09e-11!5;CL:0000240!6.79e-10!6;CL:0000311!6.79e-10!6;CL:0000079!6.79e-10!6;CL:0000237!6.79e-10!6;CL:0000036!6.79e-10!6;CL:0000357!6.79e-10!6;CL:0000114!6.79e-10!6;CL:0000362!1.23e-07!8;CL:0000095!5.99e-07!17;CL:0000123!5.99e-07!17 | |ontology_enrichment_celltype=CL:0000242!1.07e-27!2;CL:0000167!1.23e-14!1;CL:0000164!1.23e-14!1;CL:0000502!1.23e-14!1;CL:0000172!1.23e-14!1;CL:0000173!1.23e-14!1;CL:0002351!1.23e-14!1;CL:0000312!1.09e-11!5;CL:0000240!6.79e-10!6;CL:0000311!6.79e-10!6;CL:0000079!6.79e-10!6;CL:0000237!6.79e-10!6;CL:0000036!6.79e-10!6;CL:0000357!6.79e-10!6;CL:0000114!6.79e-10!6;CL:0000362!1.23e-07!8;CL:0000095!5.99e-07!17;CL:0000123!5.99e-07!17 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!1.23e-14!1;DOID:2355!2.41e-14!1;DOID:169!1.06e-09!6;DOID:74!8.04e-08!2 | |ontology_enrichment_disease=DOID:4430!1.23e-14!1;DOID:2355!2.41e-14!1;DOID:169!1.06e-09!6;DOID:74!8.04e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!5.37e-54!4;UBERON:0010133!5.37e-54!4;UBERON:0001894!4.52e-31!7;UBERON:0006222!4.52e-31!7;UBERON:0001905!3.14e-28!2;UBERON:0002757!3.14e-28!2;UBERON:0010134!3.14e-28!2;UBERON:0002784!3.14e-28!2;UBERON:0005408!3.14e-28!2;UBERON:0001899!3.14e-28!2;UBERON:0000007!1.22e-27!2;UBERON:0003056!4.80e-13!61;UBERON:0000966!9.26e-12!5;UBERON:0005388!9.26e-12!5;UBERON:0001802!9.26e-12!5;UBERON:0003075!1.85e-11!86;UBERON:0007284!1.85e-11!86;UBERON:0002346!6.51e-11!90;UBERON:0000073!3.72e-10!94;UBERON:0001016!3.72e-10!94;UBERON:0004121!9.57e-10!169;UBERON:0000924!1.72e-09!173;UBERON:0006601!1.72e-09!173;UBERON:0005743!5.99e-09!86;UBERON:0002780!6.20e-08!41;UBERON:0001890!6.20e-08!41;UBERON:0006240!6.20e-08!41;UBERON:0002360!7.52e-08!2;UBERON:0000094!7.52e-08!2;UBERON:0007645!7.52e-08!2;UBERON:0001873!9.19e-08!2;UBERON:0010122!9.19e-08!2;UBERON:0003080!9.53e-08!42;UBERON:0001017!3.08e-07!82;UBERON:0000019!6.50e-07!19;UBERON:0000047!6.50e-07!19;UBERON:0004088!6.50e-07!19;UBERON:0003072!6.50e-07!19;UBERON:0003071!6.50e-07!19;UBERON:0004128!6.50e-07!19 | |ontology_enrichment_uberon=UBERON:0003296!5.37e-54!4;UBERON:0010133!5.37e-54!4;UBERON:0001894!4.52e-31!7;UBERON:0006222!4.52e-31!7;UBERON:0001905!3.14e-28!2;UBERON:0002757!3.14e-28!2;UBERON:0010134!3.14e-28!2;UBERON:0002784!3.14e-28!2;UBERON:0005408!3.14e-28!2;UBERON:0001899!3.14e-28!2;UBERON:0000007!1.22e-27!2;UBERON:0003056!4.80e-13!61;UBERON:0000966!9.26e-12!5;UBERON:0005388!9.26e-12!5;UBERON:0001802!9.26e-12!5;UBERON:0003075!1.85e-11!86;UBERON:0007284!1.85e-11!86;UBERON:0002346!6.51e-11!90;UBERON:0000073!3.72e-10!94;UBERON:0001016!3.72e-10!94;UBERON:0004121!9.57e-10!169;UBERON:0000924!1.72e-09!173;UBERON:0006601!1.72e-09!173;UBERON:0005743!5.99e-09!86;UBERON:0002780!6.20e-08!41;UBERON:0001890!6.20e-08!41;UBERON:0006240!6.20e-08!41;UBERON:0002360!7.52e-08!2;UBERON:0000094!7.52e-08!2;UBERON:0007645!7.52e-08!2;UBERON:0001873!9.19e-08!2;UBERON:0010122!9.19e-08!2;UBERON:0003080!9.53e-08!42;UBERON:0001017!3.08e-07!82;UBERON:0000019!6.50e-07!19;UBERON:0000047!6.50e-07!19;UBERON:0004088!6.50e-07!19;UBERON:0003072!6.50e-07!19;UBERON:0003071!6.50e-07!19;UBERON:0004128!6.50e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.29e-195;2!UBERON:0002757;3.29e-195;2!UBERON:0010134;3.29e-195;2!UBERON:0005408;3.29e-195;2!UBERON:0001899;3.29e-195;2!UBERON:0003296;1.55e-98;4!UBERON:0010133;1.55e-98;4!UBERON:0002784;1.55e-98;4!UBERON:0001894;4.76e-57;7!UBERON:0000949;1.70e-11;43!UBERON:0002368;1.71e-11;33!UBERON:0002780;1.47e-07;41!UBERON:0001890;1.47e-07;41!UBERON:0002530;7.93e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.29e-195,2;UBERON:0002757,3.29e-195,2;UBERON:0010134,3.29e-195,2;UBERON:0005408,3.29e-195,2;UBERON:0001899,3.29e-195,2;UBERON:0003296,1.55e-98,4;UBERON:0010133,1.55e-98,4;UBERON:0002784,1.55e-98,4;UBERON:0001894,4.76e-57,7;UBERON:0006222,4.76e-57,7;UBERON:0002368,1.42e-12,35;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000949,4.55e-10,45;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0002530,5.66e-08,59;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr10:18580269..18580290,+ | |short_description=p@chr10:18580269..18580290,+ | ||
}} | }} |
Latest revision as of 12:23, 23 July 2015
Short description: | p@chr10:18580269..18580290, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18580269..18580290, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.29e-195 | 2 |
regional part of epithalamus | 3.29e-195 | 2 |
secretory circumventricular organ | 3.29e-195 | 2 |
circumventricular organ | 3.29e-195 | 2 |
epithalamus | 3.29e-195 | 2 |
gland of diencephalon | 1.55e-98 | 4 |
neuroendocrine gland | 1.55e-98 | 4 |
regional part of diencephalon | 1.55e-98 | 4 |
diencephalon | 4.76e-57 | 7 |
future diencephalon | 4.76e-57 | 7 |
endocrine gland | 1.42e-12 | 35 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
endocrine system | 4.55e-10 | 45 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
gland | 5.66e-08 | 59 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |