FFCP PHASE1:Hg19::chr7:16505416..16505438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25928 | |EntrezGene=25928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21748 | |HGNC=21748 | ||
|TSSclassifier=strong | |||
|UniProt=Q6X4U4,A4D125 | |UniProt=Q6X4U4,A4D125 | ||
|association_with_transcript=35bp_to_ENST00000307068,NM_015464_5end | |association_with_transcript=35bp_to_ENST00000307068,NM_015464_5end | ||
|cluster_id=chr7:16505416..16505438,- | |||
|coexpression_cluster_id=C4668 | |||
|description=CAGE_peak_2_at_SOSTDC1_5end | |description=CAGE_peak_2_at_SOSTDC1_5end | ||
|id=chr7:16505416..16505438,- | |id=chr7:16505416..16505438,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;2.86e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.76e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-31!115;UBERON:0000153!1.68e-20!129;UBERON:0007811!1.68e-20!129;UBERON:0000033!7.02e-20!123;UBERON:0002346!9.36e-20!90;UBERON:0003075!2.34e-19!86;UBERON:0007284!2.34e-19!86;UBERON:0005743!3.62e-19!86;UBERON:0001049!4.01e-19!57;UBERON:0005068!4.01e-19!57;UBERON:0006241!4.01e-19!57;UBERON:0007135!4.01e-19!57;UBERON:0000073!5.67e-19!94;UBERON:0001016!5.67e-19!94;UBERON:0000924!1.02e-18!173;UBERON:0006601!1.02e-18!173;UBERON:0004121!3.40e-18!169;UBERON:0002619!2.50e-17!22;UBERON:0002616!1.23e-16!59;UBERON:0001017!3.62e-16!82;UBERON:0001950!8.17e-16!20;UBERON:0001893!9.01e-16!34;UBERON:0002020!2.52e-15!34;UBERON:0003528!2.52e-15!34;UBERON:0002791!4.51e-15!33;UBERON:0000955!5.02e-15!69;UBERON:0006238!5.02e-15!69;UBERON:0003056!5.79e-15!61;UBERON:0001869!1.86e-14!32;UBERON:0000956!1.87e-14!25;UBERON:0000203!1.87e-14!25;UBERON:0003080!2.13e-14!42;UBERON:0002780!8.75e-14!41;UBERON:0001890!8.75e-14!41;UBERON:0006240!8.75e-14!41;UBERON:0000481!2.10e-13!347;UBERON:0000475!2.38e-09!365;UBERON:0000064!2.48e-09!219;UBERON:0000062!6.03e-08!511;UBERON:0001871!1.05e-07!7;UBERON:0000922!2.16e-07!612;UBERON:0005409!2.21e-07!35;UBERON:0002298!3.38e-07!8;UBERON:0000059!4.88e-07!11;UBERON:0001155!5.74e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!6.05e-31!115;UBERON:0000153!1.68e-20!129;UBERON:0007811!1.68e-20!129;UBERON:0000033!7.02e-20!123;UBERON:0002346!9.36e-20!90;UBERON:0003075!2.34e-19!86;UBERON:0007284!2.34e-19!86;UBERON:0005743!3.62e-19!86;UBERON:0001049!4.01e-19!57;UBERON:0005068!4.01e-19!57;UBERON:0006241!4.01e-19!57;UBERON:0007135!4.01e-19!57;UBERON:0000073!5.67e-19!94;UBERON:0001016!5.67e-19!94;UBERON:0000924!1.02e-18!173;UBERON:0006601!1.02e-18!173;UBERON:0004121!3.40e-18!169;UBERON:0002619!2.50e-17!22;UBERON:0002616!1.23e-16!59;UBERON:0001017!3.62e-16!82;UBERON:0001950!8.17e-16!20;UBERON:0001893!9.01e-16!34;UBERON:0002020!2.52e-15!34;UBERON:0003528!2.52e-15!34;UBERON:0002791!4.51e-15!33;UBERON:0000955!5.02e-15!69;UBERON:0006238!5.02e-15!69;UBERON:0003056!5.79e-15!61;UBERON:0001869!1.86e-14!32;UBERON:0000956!1.87e-14!25;UBERON:0000203!1.87e-14!25;UBERON:0003080!2.13e-14!42;UBERON:0002780!8.75e-14!41;UBERON:0001890!8.75e-14!41;UBERON:0006240!8.75e-14!41;UBERON:0000481!2.10e-13!347;UBERON:0000475!2.38e-09!365;UBERON:0000064!2.48e-09!219;UBERON:0000062!6.03e-08!511;UBERON:0001871!1.05e-07!7;UBERON:0000922!2.16e-07!612;UBERON:0005409!2.21e-07!35;UBERON:0002298!3.38e-07!8;UBERON:0000059!4.88e-07!11;UBERON:0001155!5.74e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.53e-15;33!UBERON:0005409;7.72e-14;22!UBERON:0000160;8.89e-13;17!UBERON:0000922;2.14e-09;49!UBERON:0001555;7.64e-09;54!UBERON:0000966;5.86e-08;5!UBERON:0005388;5.86e-08;5!UBERON:0001802;5.86e-08;5!UBERON:0004907;1.02e-07;5!UBERON:0001781;1.24e-07;3!UBERON:0001782;1.24e-07;3!UBERON:0001896;1.31e-07;3!UBERON:0005290;1.31e-07;3!UBERON:0002108;3.63e-07;4!UBERON:0002619;4.17e-07;22!UBERON:0000059;5.97e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.42e-13,17;UBERON:0007023,2.35e-12,114;UBERON:0005409,7.57e-12,25;UBERON:0011216,1.96e-11,223;UBERON:0004921,7.21e-08,118;UBERON:0001782,1.09e-07,3;UBERON:0005424,1.09e-07,3;UBERON:0001007,1.28e-07,145;UBERON:0001555,1.28e-07,145;UBERON:0007026,1.28e-07,145;UBERON:0004907,1.40e-07,5;UBERON:0001896,1.46e-07,3;UBERON:0005290,1.46e-07,3;UBERON:0010096,1.46e-07,3;UBERON:0002108,3.61e-07,4;UBERON:0002619,4.17e-07,22;UBERON:0000059,6.06e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.704606991862589,0.161872944368132,0.140450806702248,0.204154171254893,0.737005903870608,0,0,0.247266929278557,0,0,1.5150250255866,1.37630371859161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.348581828608555,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21379189377604,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31040709700491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0.276242966807689,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,4.87255237721139,1.64007322849853,6.83294628795036,0.824328093181778,0,0,0,0,0,0,0,0,0,0.214840489736547,0.725083469571143,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,14.4573727428809,0,0,0,0.159426272728822,0.798317485731266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92349595790849,7.57275899732753,0,11.278960407028,0,0,1.45632626099416,0,0,0,0.296964680832639,0,1.9882952955326,0.703347082052564,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0.0898683511473268,0,0,0.887790650732402,0,0,2.90799823828566,2.04089815956073,0,0,0,0.724999575434793,0.910347586283997,0,0.709163045303809,0,0,1.90987494426621,0,0.241192877250816,0,0.221158519862449,0.886642856860642,1.09692698576986,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,2.99181027420282,3.38393490925771,2.94093801476609,2.68514539161348,3.22581345631115,16.6883407929398,0,9.63073568138972,4.52329828588611,4.32777279484182,4.97630965539252,0.973033209536731,1.83309043480088,0,0,0,1.48282492557489,0,0,0,1.9566461893209,0,0,4.83962864194656,0.61214552326098,0.063186579628488,0,0.518440956986236,0,0,0,0,0.284609546029793,0,0,0,0,1.92199335066233,0,0,0,0,0.581934098930517,0,8.3612874088797,0,0,1.13959432720582,0,0,0.213452994739353,0.599428828746391,14.985403384027,0.229073192331831,0,0,0,0,0,0,0.407992870545287,0,0,0.136905378891993,0,0,0,1.11712960508902,0,0,0.199679000498991,0,0,0.873385142327441,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,1.22583065500418,0.160753148465019,0.412618309791701,0,0,0,1.64023802976667,0.335434687599266,4.09789677955831,5.97982304738978,0,0.179287339332845,0,3.57347663186684,0,34.580521121046,0,0,0,0,8.37343711643257,0,0.226624183040251,0,1.32506888912221,0.258565912723101,0.26446520348538,0,0,3.09683496446315,32.6984954607305,3.31391244277756,0,0,0,0,0,0,0,0,0.471162288750703,1.77213635993397,1.46431517882356,0.876336514945499,14.3352298922518,3.99344585532668,1.24192805882767,0,0,1.81978941049977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0.127894371303652,0,0.314531883711793,0,2.54598794931038,0,0,0.558644917973244,0,0,0,1.76337971845342,0,0.770750701157514,0,0.798169295285756,0.82046545696302,3.52900374710405,0.899044282034833,1.93770774758221,0,0,13.0946392915992,0,0.115525666150338,0,0,0,0.376051641746286,0,0,0,0,0,0.87798860003913,1.56215619722769,0.413373593002368,1.14148458349032,0.546974809018219,4.93431990171464,2.48105589194647,0.351742488719241,1.14986184875636,0.535701835878287,0,0,0.455324382702595,0,0,0.171488009437418,0.271878931907327,0.789273282754189,0,0.333694205676207,1.02041020705668,0,0,4.56579360254748,0,0,26.7322275220695,0,0,39.4658278126855,0,0,0,0,3.01159151174194,0.118332000730565,0,3.38709640152743,1.3746412112643,0,0,0.223710863595585,0,0,0,0,3.4794432940146,13.1141968125968,0,0,0,4.29195111748048,0,0,1.77500563648273,2.84127428655144,0,0.490296643507811,0,0.196308467114945,0.297046400327086,5.4945244585842,0.169927114687817,0,0.386747327841463,0,0,0,0,7.30336388246517,1.37618785021362,0.286679166302903,0,0.951880862672806,1.30905207102113,4.2322147241232,0,0,0,0.126166424835079,1.63898357945543,0.506794004045748,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,4.04709533488359,0,0.186224142887574,0,0.12729431655633,0.606351566874658,1.08858373948481,1.71116650542641,2.35732185551056,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| ||
|short_description=p2@SOSTDC1 | |short_description=p2@SOSTDC1 | ||
}} | }} |
Latest revision as of 12:55, 17 September 2015
Short description: | p2@SOSTDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOSTDC1_5end |
Coexpression cluster: | C4668_leiomyoblastoma_clear_retina_medulla_skin_lung_rhabdomyosarcoma |
Association with transcript: | 35bp_to_ENST00000307068, NM_015464_5end |
EntrezGene: | SOSTDC1 |
HGNC: | 21748 |
UniProt: | Q6X4U4A4D125 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.42e-13 | 17 |
adult organism | 2.35e-12 | 114 |
gastrointestinal system | 7.57e-12 | 25 |
organ system subdivision | 1.96e-11 | 223 |
subdivision of digestive tract | 7.21e-08 | 118 |
pigmented layer of retina | 1.09e-07 | 3 |
presumptive retinal pigmented epithelium | 1.09e-07 | 3 |
digestive system | 1.28e-07 | 145 |
digestive tract | 1.28e-07 | 145 |
primitive gut | 1.28e-07 | 145 |
lower digestive tract | 1.40e-07 | 5 |
medulla oblongata | 1.46e-07 | 3 |
myelencephalon | 1.46e-07 | 3 |
future myelencephalon | 1.46e-07 | 3 |
small intestine | 3.61e-07 | 4 |
regional part of cerebral cortex | 4.17e-07 | 22 |
large intestine | 6.06e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.76e-10 | 8 |