FFCP PHASE1:Hg19::chr6:123958371..123958380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SWK9,Q13061,Q8IVK2 | |UniProt=Q5SWK9,Q13061,Q8IVK2 | ||
|association_with_transcript=-133bp_to_ENST00000334268,NM_001251987,NM_006073_5end | |association_with_transcript=-133bp_to_ENST00000334268,NM_001251987,NM_006073_5end | ||
|cluster_id=chr6:123958371..123958380,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_12_at_TRDN_5end | |description=CAGE_peak_12_at_TRDN_5end | ||
|id=chr6:123958371..123958380,- | |id=chr6:123958371..123958380,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.39e-10;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p12@TRDN | |short_description=p12@TRDN | ||
}} | }} |
Latest revision as of 06:19, 20 September 2015
Short description: | p12@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TRDN_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -133bp_to_ENST00000334268, NM_001251987, NM_006073_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | Q5SWK9Q13061Q8IVK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 5.53e-66 | 2 |
hindlimb bud | 3.61e-34 | 1 |
soleus muscle | 3.61e-34 | 1 |
appendage | 3.61e-34 | 1 |
lower limb segment | 3.61e-34 | 1 |
multi-limb segment region | 3.61e-34 | 1 |
hindlimb muscle | 3.61e-34 | 1 |
hindlimb zeugopod muscle | 3.61e-34 | 1 |
paired limb/fin | 3.61e-34 | 1 |
limb | 3.61e-34 | 1 |
pelvic appendage | 3.61e-34 | 1 |
limb segment | 3.61e-34 | 1 |
paired limb/fin segment | 3.61e-34 | 1 |
limb muscle | 3.61e-34 | 1 |
pelvic complex muscle | 3.61e-34 | 1 |
zeugopod | 3.61e-34 | 1 |
muscle of leg | 3.61e-34 | 1 |
paired limb/fin bud | 3.61e-34 | 1 |
limb bud | 3.61e-34 | 1 |
pelvic appendage bud | 3.61e-34 | 1 |
limb/fin field | 3.61e-34 | 1 |
subdivision of organism along appendicular axis | 3.61e-34 | 1 |
appendage girdle complex | 3.61e-34 | 1 |
leg | 3.61e-34 | 1 |
hindlimb | 3.61e-34 | 1 |
triceps surae | 3.61e-34 | 1 |
hindlimb zeugopod | 3.61e-34 | 1 |
posterior region of body | 3.61e-34 | 1 |
pelvic complex | 3.61e-34 | 1 |
limb field | 3.61e-34 | 1 |
hindlimb/pelvic fin field | 3.61e-34 | 1 |
muscle structure | 7.67e-18 | 2 |
muscle organ | 7.67e-18 | 2 |
neck | 3.71e-14 | 10 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |