FFCP PHASE1:Hg19::chr16:23766337..23766367,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:23766337..23766367,+
|short_description=p1@CHP2
|description=CAGE_peak_1_at_CHP2_5end
|association_with_transcript=389bp_to_ENST00000300113,NM_022097,uc00...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63928 | |EntrezGene=63928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=O43745,A8K2I8 | |UniProt=O43745,A8K2I8 | ||
|association_with_transcript=389bp_to_ENST00000300113,NM_022097,uc002dmb.1_5end | |||
|cluster_id=chr16:23766337..23766367,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_CHP2_5end | |||
|id=chr16:23766337..23766367,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.17e-11!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.23e-13;1!UBERON:0006965;4.83e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.62e-34!115;UBERON:0001049!1.04e-20!57;UBERON:0005068!1.04e-20!57;UBERON:0006241!1.04e-20!57;UBERON:0007135!1.04e-20!57;UBERON:0005743!6.00e-16!86;UBERON:0001017!8.98e-16!82;UBERON:0002616!1.02e-14!59;UBERON:0003075!9.23e-14!86;UBERON:0007284!9.23e-14!86;UBERON:0000073!9.83e-14!94;UBERON:0001016!9.83e-14!94;UBERON:0002780!1.11e-13!41;UBERON:0001890!1.11e-13!41;UBERON:0006240!1.11e-13!41;UBERON:0003080!2.96e-13!42;UBERON:0002346!7.78e-13!90;UBERON:0001893!1.45e-11!34;UBERON:0000955!1.63e-11!69;UBERON:0006238!1.63e-11!69;UBERON:0002791!1.86e-10!33;UBERON:0002020!4.20e-10!34;UBERON:0003528!4.20e-10!34;UBERON:0003076!4.38e-09!15;UBERON:0003057!4.38e-09!15;UBERON:0001869!4.43e-09!32;UBERON:0003056!7.07e-09!61;UBERON:0000059!2.19e-08!11;UBERON:0002240!3.51e-08!3;UBERON:0005409!5.09e-08!35;UBERON:0001950!1.21e-07!20;UBERON:0000160!1.32e-07!27;UBERON:0002298!1.76e-07!8;UBERON:0000956!3.50e-07!25;UBERON:0000203!3.50e-07!25;UBERON:0002619!7.85e-07!22;UBERON:0000922!9.33e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.37e-41;17!UBERON:0005409;3.24e-32;22!UBERON:0000059;8.17e-27;11!UBERON:0002108;2.68e-22;4!UBERON:0001155;2.47e-21;9!UBERON:0004921;4.64e-20;33!UBERON:0001154;4.23e-13;1!UBERON:0001153;4.23e-13;1!UBERON:0009854;4.23e-13;1!UBERON:0000996;8.15e-13;1!UBERON:0002426;8.15e-13;1!UBERON:0003831;8.15e-13;1!UBERON:0003898;8.15e-13;1!UBERON:0004830;8.15e-13;1!UBERON:0003830;8.15e-13;1!UBERON:0005175;8.15e-13;1!UBERON:0001774;8.15e-13;1!UBERON:0001103;8.15e-13;1!UBERON:0004907;2.25e-10;5!UBERON:0001555;2.71e-08;54!UBERON:0001255;4.83e-07;2!UBERON:0005090;4.83e-07;2!UBERON:0001630;4.83e-07;2!UBERON:0001556;4.83e-07;2!UBERON:0000473;9.38e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.37e-41,17;UBERON:0005409,2.04e-28,25;UBERON:0000059,8.17e-27,11;UBERON:0002108,2.68e-22,4;UBERON:0001155,2.47e-21,9;UBERON:0001154,4.23e-13,1;UBERON:0001153,4.23e-13,1;UBERON:0001045,4.23e-13,1;UBERON:0002426,6.82e-13,1;UBERON:0003831,6.82e-13,1;UBERON:0003898,6.82e-13,1;UBERON:0004830,6.82e-13,1;UBERON:0003830,6.82e-13,1;UBERON:0005175,6.82e-13,1;UBERON:0001774,6.82e-13,1;UBERON:0001103,6.82e-13,1;UBERON:0010084,6.82e-13,1;UBERON:0000996,9.73e-13,1;UBERON:0004907,2.25e-10,5;UBERON:0001046,4.74e-10,19;UBERON:0007023,5.98e-09,114;UBERON:0004921,1.18e-08,118;UBERON:0001255,4.17e-07,2;UBERON:0001556,4.17e-07,2;UBERON:0005090,4.42e-07,2;UBERON:0001630,4.42e-07,2;UBERON:0001007,8.32e-07,145;UBERON:0001555,8.32e-07,145;UBERON:0007026,8.32e-07,145;UBERON:0000473,9.38e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.39473591775749,10.7750727057148,0,0,0,0,0,0,0,1.67693789582787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,34.8341675877477,45.9979335417364,59.2699240585617,0,0,0,0.404406797884062,1.60515529459758,0.937057782901357,0,0.19566461893209,0,0.789168805698781,66.5448938267651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.316553979779393,0.195551382734803,0,0,0.999048047910651,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0.242998226632099,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.615349092722265,0.252071696221718,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0.40781839786099,0.263091094251396,0,0,0.941917114206168,0,0.280272163313789,13.6973808076424,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,123.941697921359,103.81579123938,0,0,0,0.196308467114945,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,51.3156035299938,0,0,0,0,0,0,0,0,0,0,2.80381183407486,2.94760543171796,0,0.103432995861895,0,0.23806443146374,0.193766729508018,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.358611026963382,0.99798106963804,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.39473591775749,10.7750727057148,0,0,0,0,0,0,0,1.67693789582787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,34.8341675877477,45.9979335417364,59.2699240585617,0,0,0,0.404406797884062,1.60515529459758,0.937057782901357,0,0.19566461893209,0,0.789168805698781,66.5448938267651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.316553979779393,0.195551382734803,0,0,0.999048047910651,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0.242998226632099,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.615349092722265,0.252071696221718,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0.40781839786099,0.263091094251396,0,0,0.941917114206168,0,0.280272163313789,13.6973808076424,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,123.941697921359,103.81579123938,0,0,0,0.196308467114945,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,51.3156035299938,0,0,0,0,0,0,0,0,0,0,2.80381183407486,2.94760543171796,0,0.103432995861895,0,0.23806443146374,0.193766729508018,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.358611026963382,0.99798106963804,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0.201273793591026,0 | ||
|short_description=p1@CHP2 | |||
}} | }} |
Latest revision as of 06:32, 25 September 2015
Short description: | p1@CHP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHP2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 389bp_to_ENST00000300113, NM_022097, uc002dmb.1_5end |
EntrezGene: | CHP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.37e-41 | 17 |
gastrointestinal system | 2.04e-28 | 25 |
large intestine | 8.17e-27 | 11 |
small intestine | 2.68e-22 | 4 |
colon | 2.47e-21 | 9 |
vermiform appendix | 4.23e-13 | 1 |
caecum | 4.23e-13 | 1 |
midgut | 4.23e-13 | 1 |
chest muscle | 6.82e-13 | 1 |
respiratory system muscle | 6.82e-13 | 1 |
skeletal muscle of trunk | 6.82e-13 | 1 |
respiratory system skeletal muscle | 6.82e-13 | 1 |
thoracic segment muscle | 6.82e-13 | 1 |
chest organ | 6.82e-13 | 1 |
muscle of trunk | 6.82e-13 | 1 |
diaphragm | 6.82e-13 | 1 |
future diaphragm | 6.82e-13 | 1 |
vagina | 9.73e-13 | 1 |
lower digestive tract | 2.25e-10 | 5 |
hindgut | 4.74e-10 | 19 |
adult organism | 5.98e-09 | 114 |
subdivision of digestive tract | 1.18e-08 | 118 |
urinary bladder | 4.17e-07 | 2 |
lower urinary tract | 4.17e-07 | 2 |
muscle structure | 4.42e-07 | 2 |
muscle organ | 4.42e-07 | 2 |
digestive system | 8.32e-07 | 145 |
digestive tract | 8.32e-07 | 145 |
primitive gut | 8.32e-07 | 145 |
testis | 9.38e-07 | 8 |