FFCP PHASE1:Hg19::chr5:114516014..114516025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55521 | |EntrezGene=55521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16280 | |HGNC=16280 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ86 | |UniProt=Q9NQ86 | ||
|association_with_transcript=-158bp_to_ENST00000282369_5end | |association_with_transcript=-158bp_to_ENST00000282369_5end | ||
|cluster_id=chr5:114516014..114516025,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_TRIM36_5end | |description=CAGE_peak_5_at_TRIM36_5end | ||
|id=chr5:114516014..114516025,- | |id=chr5:114516014..114516025,- | ||
|ontology_enrichment_celltype=CL:0002319!6.18e-12!25;CL:0000133!6.71e-08!59;CL:0000047!8.66e-08!8 | |ontology_enrichment_celltype=CL:0002319!6.18e-12!25;CL:0000133!6.71e-08!59;CL:0000047!8.66e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.02e-11;25!CL:0000540;8.86e-11;6!CL:0000404;8.86e-11;6!CL:0002605;6.86e-10;3!CL:0000128;4.18e-09;7!CL:0000126;4.18e-09;7!CL:0000127;4.18e-09;7!CL:0000222;7.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.24e-14,8;CL:0002319,1.81e-11,25;CL:0000540,6.68e-11,6;CL:0000031,6.68e-11,6;CL:0000404,6.68e-11,6;CL:0002605,9.38e-10,3;CL:0000128,4.30e-09,7;CL:0000126,4.30e-09,7;CL:0000127,4.30e-09,7;CL:0002453,4.30e-09,7;CL:0000133,1.47e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;8.86e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.80e-57!94;UBERON:0001016!4.80e-57!94;UBERON:0005743!4.96e-54!86;UBERON:0001017!6.87e-49!82;UBERON:0001049!3.01e-45!57;UBERON:0005068!3.01e-45!57;UBERON:0006241!3.01e-45!57;UBERON:0007135!3.01e-45!57;UBERON:0002346!2.01e-42!90;UBERON:0003075!3.51e-41!86;UBERON:0007284!3.51e-41!86;UBERON:0002780!3.68e-38!41;UBERON:0001890!3.68e-38!41;UBERON:0006240!3.68e-38!41;UBERON:0000955!4.49e-38!69;UBERON:0006238!4.49e-38!69;UBERON:0003080!5.33e-37!42;UBERON:0002616!1.05e-36!59;UBERON:0002020!1.61e-36!34;UBERON:0003528!1.61e-36!34;UBERON:0001893!4.13e-36!34;UBERON:0003056!4.93e-36!61;UBERON:0002791!1.35e-34!33;UBERON:0001869!4.27e-34!32;UBERON:0000924!8.55e-31!173;UBERON:0006601!8.55e-31!173;UBERON:0004121!1.76e-29!169;UBERON:0000956!2.82e-27!25;UBERON:0000203!2.82e-27!25;UBERON:0000033!8.36e-25!123;UBERON:0002619!6.20e-23!22;UBERON:0000153!6.70e-23!129;UBERON:0007811!6.70e-23!129;UBERON:0001950!7.86e-23!20;UBERON:0007023!7.87e-20!115;UBERON:0002420!1.00e-10!9;UBERON:0007245!1.00e-10!9;UBERON:0010009!1.00e-10!9;UBERON:0010011!1.00e-10!9;UBERON:0000454!1.00e-10!9;UBERON:0002308!1.39e-10!9;UBERON:0000125!1.39e-10!9;UBERON:0000025!1.91e-10!194;UBERON:0000200!3.38e-10!6;UBERON:0001871!3.61e-10!7;UBERON:0003076!1.89e-09!15;UBERON:0003057!1.89e-09!15;UBERON:0001872!5.04e-09!5;UBERON:0000064!8.18e-08!219;UBERON:0009663!9.27e-08!7;UBERON:0000369!3.91e-07!4;UBERON:0002435!3.91e-07!4;UBERON:0000204!3.91e-07!4;UBERON:0010082!3.91e-07!4;UBERON:0002298!5.66e-07!8 | |ontology_enrichment_uberon=UBERON:0000073!4.80e-57!94;UBERON:0001016!4.80e-57!94;UBERON:0005743!4.96e-54!86;UBERON:0001017!6.87e-49!82;UBERON:0001049!3.01e-45!57;UBERON:0005068!3.01e-45!57;UBERON:0006241!3.01e-45!57;UBERON:0007135!3.01e-45!57;UBERON:0002346!2.01e-42!90;UBERON:0003075!3.51e-41!86;UBERON:0007284!3.51e-41!86;UBERON:0002780!3.68e-38!41;UBERON:0001890!3.68e-38!41;UBERON:0006240!3.68e-38!41;UBERON:0000955!4.49e-38!69;UBERON:0006238!4.49e-38!69;UBERON:0003080!5.33e-37!42;UBERON:0002616!1.05e-36!59;UBERON:0002020!1.61e-36!34;UBERON:0003528!1.61e-36!34;UBERON:0001893!4.13e-36!34;UBERON:0003056!4.93e-36!61;UBERON:0002791!1.35e-34!33;UBERON:0001869!4.27e-34!32;UBERON:0000924!8.55e-31!173;UBERON:0006601!8.55e-31!173;UBERON:0004121!1.76e-29!169;UBERON:0000956!2.82e-27!25;UBERON:0000203!2.82e-27!25;UBERON:0000033!8.36e-25!123;UBERON:0002619!6.20e-23!22;UBERON:0000153!6.70e-23!129;UBERON:0007811!6.70e-23!129;UBERON:0001950!7.86e-23!20;UBERON:0007023!7.87e-20!115;UBERON:0002420!1.00e-10!9;UBERON:0007245!1.00e-10!9;UBERON:0010009!1.00e-10!9;UBERON:0010011!1.00e-10!9;UBERON:0000454!1.00e-10!9;UBERON:0002308!1.39e-10!9;UBERON:0000125!1.39e-10!9;UBERON:0000025!1.91e-10!194;UBERON:0000200!3.38e-10!6;UBERON:0001871!3.61e-10!7;UBERON:0003076!1.89e-09!15;UBERON:0003057!1.89e-09!15;UBERON:0001872!5.04e-09!5;UBERON:0000064!8.18e-08!219;UBERON:0009663!9.27e-08!7;UBERON:0000369!3.91e-07!4;UBERON:0002435!3.91e-07!4;UBERON:0000204!3.91e-07!4;UBERON:0010082!3.91e-07!4;UBERON:0002298!5.66e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.47e-19;25!UBERON:0000203;1.47e-19;25!UBERON:0001869;6.49e-18;32!UBERON:0003528;3.21e-17;34!UBERON:0002020;3.21e-17;34!UBERON:0001893;9.31e-16;34!UBERON:0002780;1.40e-15;41!UBERON:0001890;1.40e-15;41!UBERON:0001950;5.80e-15;20!UBERON:0000073;6.45e-15;53!UBERON:0002616;6.45e-15;53!UBERON:0002791;2.20e-14;32!UBERON:0000007;2.20e-14;2!UBERON:0002619;1.37e-13;22!UBERON:0001872;1.02e-12;5!UBERON:0001016;3.20e-11;83!UBERON:0000955;1.40e-10;68!UBERON:0000922;3.33e-08;49!UBERON:0001017;5.87e-08;75!UBERON:0007190;7.09e-08;1!UBERON:0003296;1.26e-07;4!UBERON:0010133;1.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.02e-31,89;UBERON:0001017,2.02e-28,81;UBERON:0001049,2.54e-23,56;UBERON:0005068,2.54e-23,56;UBERON:0006241,2.54e-23,56;UBERON:0007135,2.54e-23,56;UBERON:0000073,1.83e-21,53;UBERON:0002616,1.83e-21,53;UBERON:0002780,1.12e-20,41;UBERON:0001890,1.12e-20,41;UBERON:0003080,1.12e-20,41;UBERON:0006240,1.12e-20,41;UBERON:0000956,1.53e-19,25;UBERON:0000203,1.53e-19,25;UBERON:0001869,1.53e-18,32;UBERON:0000955,1.60e-18,68;UBERON:0006238,1.60e-18,68;UBERON:0003528,1.93e-17,34;UBERON:0002020,1.93e-17,34;UBERON:0001893,2.19e-17,34;UBERON:0002346,2.25e-16,86;UBERON:0004121,5.08e-16,171;UBERON:0000924,5.08e-16,171;UBERON:0006601,5.08e-16,171;UBERON:0002791,4.26e-15,32;UBERON:0003075,4.28e-15,82;UBERON:0007284,4.28e-15,82;UBERON:0001950,5.16e-15,20;UBERON:0000007,1.57e-14,2;UBERON:0011216,6.75e-14,223;UBERON:0002619,1.23e-13,22;UBERON:0003056,2.73e-13,61;UBERON:0001872,1.29e-12,5;UBERON:0010371,2.56e-11,104;UBERON:0010314,2.51e-08,132;UBERON:0003296,1.07e-07,4;UBERON:0010133,1.07e-07,4;UBERON:0007190,1.21e-07,1 | |||
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| ||
|short_description=p5@TRIM36 | |short_description=p5@TRIM36 | ||
}} | }} |
Latest revision as of 19:29, 19 September 2015
Short description: | p5@TRIM36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM36_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -158bp_to_ENST00000282369_5end |
EntrezGene: | TRIM36 |
HGNC: | 16280 |
UniProt: | Q9NQ86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.24e-14 | 8 |
neural cell | 1.81e-11 | 25 |
neuron | 6.68e-11 | 6 |
neuroblast | 6.68e-11 | 6 |
electrically signaling cell | 6.68e-11 | 6 |
astrocyte of the cerebral cortex | 9.38e-10 | 3 |
oligodendrocyte | 4.30e-09 | 7 |
macroglial cell | 4.30e-09 | 7 |
astrocyte | 4.30e-09 | 7 |
oligodendrocyte precursor cell | 4.30e-09 | 7 |
neurectodermal cell | 1.47e-07 | 59 |