FFCP PHASE1:Hg19::chr5:1112166..1112190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10723 | |EntrezGene=10723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10915 | |HGNC=10915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y666 | |UniProt=Q9Y666 | ||
|association_with_transcript=0bp_to_ENST00000343658,NM_006598,uc003jbu.2_5end | |association_with_transcript=0bp_to_ENST00000343658,NM_006598,uc003jbu.2_5end | ||
|cluster_id=chr5:1112166..1112190,- | |||
|description=CAGE_peak_2_at_SLC12A7_5end | |description=CAGE_peak_2_at_SLC12A7_5end | ||
|id=chr5:1112166..1112190,- | |id=chr5:1112166..1112190,- | ||
|ontology_enrichment_celltype=CL:0002078!3.60e-12!44;CL:0000115!1.76e-10!35;CL:0000213!2.16e-10!57;CL:0000215!2.16e-10!57;CL:0000066!1.47e-08!254;CL:1000497!1.47e-08!18;CL:0002518!1.47e-08!18;CL:1000449!2.25e-07!16;CL:0002139!4.19e-07!24 | |ontology_enrichment_celltype=CL:0002078!3.60e-12!44;CL:0000115!1.76e-10!35;CL:0000213!2.16e-10!57;CL:0000215!2.16e-10!57;CL:0000066!1.47e-08!254;CL:1000497!1.47e-08!18;CL:0002518!1.47e-08!18;CL:1000449!2.25e-07!16;CL:0002139!4.19e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.56e-09;17!CL:0002518;1.56e-09;17!CL:0000115;3.11e-09;36!CL:1000449;2.59e-08;15!CL:0002078;3.37e-08;45!CL:0002139;3.40e-07;24!CL:0002681;9.56e-07;12!CL:0002584;9.56e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,1.44e-12,45;CL:0000115,7.10e-11,36;CL:0000213,9.37e-11,58;CL:0000215,9.37e-11,58;CL:1000497,1.69e-09,17;CL:0002518,1.69e-09,17;CL:0000066,1.41e-08,253;CL:1000449,2.79e-08,15;CL:0002139,4.10e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!9.95e-12!107;UBERON:0005172!4.57e-09!55;UBERON:0005173!4.57e-09!55;UBERON:0001008!2.66e-08!45;UBERON:0006554!8.06e-08!44;UBERON:0000466!8.48e-08!126;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0006555!1.44e-07!17;UBERON:0005103!1.44e-07!17;UBERON:0000083!1.44e-07!17;UBERON:0009201!1.44e-07!17;UBERON:0004819!1.44e-07!17;UBERON:0006553!1.44e-07!17;UBERON:0003074!1.44e-07!17;UBERON:0003060!1.44e-07!17;UBERON:0000489!1.51e-07!32;UBERON:0002113!1.64e-07!27;UBERON:0003918!1.64e-07!27;UBERON:0005095!1.64e-07!27;UBERON:0007687!1.64e-07!27;UBERON:0003064!1.80e-07!37;UBERON:0004211!2.25e-07!16;UBERON:0001285!2.25e-07!16;UBERON:0007684!2.25e-07!16;UBERON:0003220!2.25e-07!16;UBERON:0004208!2.25e-07!16;UBERON:0000058!3.34e-07!26;UBERON:0003887!3.61e-07!21;UBERON:0004876!4.59e-07!20;UBERON:0009569!4.80e-07!113;UBERON:0001851!8.24e-07!16 | |ontology_enrichment_uberon=UBERON:0005177!9.95e-12!107;UBERON:0005172!4.57e-09!55;UBERON:0005173!4.57e-09!55;UBERON:0001008!2.66e-08!45;UBERON:0006554!8.06e-08!44;UBERON:0000466!8.48e-08!126;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0006555!1.44e-07!17;UBERON:0005103!1.44e-07!17;UBERON:0000083!1.44e-07!17;UBERON:0009201!1.44e-07!17;UBERON:0004819!1.44e-07!17;UBERON:0006553!1.44e-07!17;UBERON:0003074!1.44e-07!17;UBERON:0003060!1.44e-07!17;UBERON:0000489!1.51e-07!32;UBERON:0002113!1.64e-07!27;UBERON:0003918!1.64e-07!27;UBERON:0005095!1.64e-07!27;UBERON:0007687!1.64e-07!27;UBERON:0003064!1.80e-07!37;UBERON:0004211!2.25e-07!16;UBERON:0001285!2.25e-07!16;UBERON:0007684!2.25e-07!16;UBERON:0003220!2.25e-07!16;UBERON:0004208!2.25e-07!16;UBERON:0000058!3.34e-07!26;UBERON:0003887!3.61e-07!21;UBERON:0004876!4.59e-07!20;UBERON:0009569!4.80e-07!113;UBERON:0001851!8.24e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.29e-09;30!UBERON:0001008;3.29e-09;30!UBERON:0006555;2.59e-08;15!UBERON:0004819;2.59e-08;15!UBERON:0001285;2.59e-08;15!UBERON:0007684;2.59e-08;15!UBERON:0001851;1.02e-07;15!UBERON:0002113;1.12e-07;24!UBERON:0011143;1.12e-07;24!UBERON:0000489;1.37e-07;29!UBERON:0001225;9.56e-07;12!UBERON:0008987;9.56e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.39e-13,101;UBERON:0005172,1.50e-09,54;UBERON:0005173,1.50e-09,54;UBERON:0006555,1.88e-08,16;UBERON:0004819,1.88e-08,16;UBERON:0004211,2.79e-08,15;UBERON:0009773,2.79e-08,15;UBERON:0001231,2.79e-08,15;UBERON:0001285,2.79e-08,15;UBERON:0007684,2.79e-08,15;UBERON:0004208,2.79e-08,15;UBERON:0002113,3.90e-08,26;UBERON:0003918,3.90e-08,26;UBERON:0011143,3.90e-08,26;UBERON:0005095,3.90e-08,26;UBERON:0007687,3.90e-08,26;UBERON:0000489,4.19e-08,31;UBERON:0001851,1.18e-07,15;UBERON:0009569,1.97e-07,112;UBERON:0002193,2.22e-07,108;UBERON:0001008,4.00e-07,48;UBERON:0002417,5.09e-07,60;UBERON:0000916,5.09e-07,60 | |||
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| ||
|short_description=p2@SLC12A7 | |short_description=p2@SLC12A7 | ||
}} | }} |
Latest revision as of 17:40, 19 September 2015
Short description: | p2@SLC12A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC12A7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343658, NM_006598, uc003jbu.2_5end |
EntrezGene: | SLC12A7 |
HGNC: | 10915 |
UniProt: | Q9Y666 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.44e-12 | 45 |
endothelial cell | 7.10e-11 | 36 |
lining cell | 9.37e-11 | 58 |
barrier cell | 9.37e-11 | 58 |
kidney cell | 1.69e-09 | 17 |
kidney epithelial cell | 1.69e-09 | 17 |
epithelial cell | 1.41e-08 | 253 |
epithelial cell of nephron | 2.79e-08 | 15 |
endothelial cell of vascular tree | 4.10e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.39e-13 | 101 |
abdomen element | 1.50e-09 | 54 |
abdominal segment element | 1.50e-09 | 54 |
excretory tube | 1.88e-08 | 16 |
kidney epithelium | 1.88e-08 | 16 |
nephron epithelium | 2.79e-08 | 15 |
renal tubule | 2.79e-08 | 15 |
nephron tubule | 2.79e-08 | 15 |
nephron | 2.79e-08 | 15 |
uriniferous tubule | 2.79e-08 | 15 |
nephrogenic mesenchyme | 2.79e-08 | 15 |
kidney | 3.90e-08 | 26 |
kidney mesenchyme | 3.90e-08 | 26 |
upper urinary tract | 3.90e-08 | 26 |
kidney rudiment | 3.90e-08 | 26 |
kidney field | 3.90e-08 | 26 |
cavitated compound organ | 4.19e-08 | 31 |
cortex | 1.18e-07 | 15 |
subdivision of trunk | 1.97e-07 | 112 |
hemolymphoid system | 2.22e-07 | 108 |
renal system | 4.00e-07 | 48 |
abdominal segment of trunk | 5.09e-07 | 60 |
abdomen | 5.09e-07 | 60 |