FFCP PHASE1:Hg19::chr4:74283318..74283329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-393bp_to_ENST00000486939_5end | |association_with_transcript=-393bp_to_ENST00000486939_5end | ||
|cluster_id=chr4:74283318..74283329,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_36_at_ALB_5end | |description=CAGE_peak_36_at_ALB_5end | ||
|id=chr4:74283318..74283329,+ | |id=chr4:74283318..74283329,+ | ||
|ontology_enrichment_celltype=CL:0000181!7.33e-45!12;CL:0000417!7.33e-45!12;CL:0000668!7.33e-45!12;CL:0000414!7.33e-45!12;CL:0000412!7.33e-45!12;CL:0000182!7.33e-45!12;CL:0000223!3.99e-14!59 | |ontology_enrichment_celltype=CL:0000181!7.33e-45!12;CL:0000417!7.33e-45!12;CL:0000668!7.33e-45!12;CL:0000414!7.33e-45!12;CL:0000412!7.33e-45!12;CL:0000182!7.33e-45!12;CL:0000223!3.99e-14!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.83e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.83e-59,12;CL:0000223,3.09e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.11e-44;11!UBERON:0009497;7.21e-38;13!UBERON:0001041;1.43e-16;30!UBERON:0003104;5.24e-16;31!CL:0000223;3.63e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.54e-46!19;UBERON:0006925!1.54e-46!19;UBERON:0008836!1.54e-46!19;UBERON:0008835!4.55e-40!22;UBERON:0003894!4.55e-40!22;UBERON:0009854!2.76e-38!23;UBERON:0007499!3.80e-35!25;UBERON:0009497!3.80e-35!25;UBERON:0000015!3.80e-35!25;UBERON:0002423!3.80e-35!25;UBERON:0006235!3.80e-35!25;UBERON:0004161!3.80e-35!25;UBERON:0005057!9.31e-34!26;UBERON:0009856!9.31e-34!26;UBERON:0002365!3.73e-28!31;UBERON:0002330!3.73e-28!31;UBERON:0002368!8.04e-25!35;UBERON:0000949!1.60e-23!45;UBERON:0003929!2.20e-19!54;UBERON:0005172!2.08e-15!55;UBERON:0005173!2.08e-15!55;UBERON:0004921!8.76e-15!129;UBERON:0004185!8.76e-15!129;UBERON:0001041!1.16e-14!98;UBERON:0002530!2.73e-14!59;UBERON:0002417!8.75e-14!61;UBERON:0000916!8.75e-14!61;UBERON:0005177!2.75e-13!107;UBERON:0000466!4.66e-13!126;UBERON:0000077!1.28e-12!130;UBERON:0005911!2.56e-12!82;UBERON:0001007!5.48e-12!155;UBERON:0001555!5.48e-12!155;UBERON:0007026!5.48e-12!155;UBERON:0004119!7.82e-11!169;UBERON:0000925!7.82e-11!169;UBERON:0006595!7.82e-11!169;UBERON:0009569!2.07e-10!113;UBERON:0001048!2.55e-09!168;UBERON:0003126!4.16e-07!7;UBERON:0001005!4.16e-07!7;UBERON:0000490!9.20e-07!138;UBERON:0003127!9.54e-07!2 | |ontology_enrichment_uberon=UBERON:0002107!1.54e-46!19;UBERON:0006925!1.54e-46!19;UBERON:0008836!1.54e-46!19;UBERON:0008835!4.55e-40!22;UBERON:0003894!4.55e-40!22;UBERON:0009854!2.76e-38!23;UBERON:0007499!3.80e-35!25;UBERON:0009497!3.80e-35!25;UBERON:0000015!3.80e-35!25;UBERON:0002423!3.80e-35!25;UBERON:0006235!3.80e-35!25;UBERON:0004161!3.80e-35!25;UBERON:0005057!9.31e-34!26;UBERON:0009856!9.31e-34!26;UBERON:0002365!3.73e-28!31;UBERON:0002330!3.73e-28!31;UBERON:0002368!8.04e-25!35;UBERON:0000949!1.60e-23!45;UBERON:0003929!2.20e-19!54;UBERON:0005172!2.08e-15!55;UBERON:0005173!2.08e-15!55;UBERON:0004921!8.76e-15!129;UBERON:0004185!8.76e-15!129;UBERON:0001041!1.16e-14!98;UBERON:0002530!2.73e-14!59;UBERON:0002417!8.75e-14!61;UBERON:0000916!8.75e-14!61;UBERON:0005177!2.75e-13!107;UBERON:0000466!4.66e-13!126;UBERON:0000077!1.28e-12!130;UBERON:0005911!2.56e-12!82;UBERON:0001007!5.48e-12!155;UBERON:0001555!5.48e-12!155;UBERON:0007026!5.48e-12!155;UBERON:0004119!7.82e-11!169;UBERON:0000925!7.82e-11!169;UBERON:0006595!7.82e-11!169;UBERON:0009569!2.07e-10!113;UBERON:0001048!2.55e-09!168;UBERON:0003126!4.16e-07!7;UBERON:0001005!4.16e-07!7;UBERON:0000490!9.20e-07!138;UBERON:0003127!9.54e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.33e-66;19!UBERON:0006925;5.33e-66;19!UBERON:0002423;3.68e-50;25!UBERON:0002365;6.87e-39;31!UBERON:0002330;6.87e-39;31!UBERON:0002368;2.66e-34;33!UBERON:0000949;4.79e-25;43!UBERON:0005172;6.05e-15;52!UBERON:0005173;6.05e-15;52!UBERON:0002417;4.44e-13;58!UBERON:0000916;4.44e-13;58!UBERON:0002530;5.90e-13;57!UBERON:0001007;3.80e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.33e-66,19;UBERON:0006925,5.33e-66,19;UBERON:0008836,5.33e-66,19;UBERON:0008835,5.30e-57,22;UBERON:0003894,5.30e-57,22;UBERON:0009854,1.59e-54,23;UBERON:0007499,3.68e-50,25;UBERON:0009497,3.68e-50,25;UBERON:0000015,3.68e-50,25;UBERON:0002423,3.68e-50,25;UBERON:0006235,3.68e-50,25;UBERON:0004161,3.68e-50,25;UBERON:0009856,3.13e-48,26;UBERON:0002365,1.92e-40,31;UBERON:0002330,1.92e-40,31;UBERON:0002368,8.25e-36,35;UBERON:0000949,8.02e-28,45;UBERON:0003929,3.73e-23,54;UBERON:0005172,3.73e-23,54;UBERON:0005173,3.73e-23,54;UBERON:0002530,3.57e-21,59;UBERON:0002417,8.11e-21,60;UBERON:0000916,8.11e-21,60;UBERON:0005911,3.69e-15,82;UBERON:0001041,2.86e-14,87;UBERON:0005177,3.03e-12,101;UBERON:0009569,5.27e-11,112;UBERON:0003914,1.62e-10,117;UBERON:0004921,2.47e-10,118;UBERON:0005256,4.53e-10,122;UBERON:0001007,2.42e-08,145;UBERON:0001555,2.42e-08,145;UBERON:0007026,2.42e-08,145;UBERON:0000490,3.18e-08,148;UBERON:0001048,1.43e-07,160;UBERON:0003104,1.43e-07,160;UBERON:0009142,1.43e-07,160;UBERON:0004119,1.60e-07,160;UBERON:0000925,1.60e-07,160;UBERON:0006595,1.60e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,21.6221987669078,5.90789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,2.96697090172199,1.95470277177136,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2414323025206,10.6005511129777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,21.6221987669078,5.90789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,2.96697090172199,1.95470277177136,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2414323025206,10.6005511129777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p36@ALB | |short_description=p36@ALB | ||
}} | }} |
Latest revision as of 13:11, 18 September 2015
Short description: | p36@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -393bp_to_ENST00000486939_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.83e-59 | 12 |
endodermal cell | 3.09e-12 | 58 |