FFCP PHASE1:Hg19::chr16:15932105..15932131,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:15932105..15932131,-
|short_description=p3@AB384538
|description=CAGE_peak_3_at_AB384538_5end
|association_with_transcript=0bp_to_AB384538_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB384538_5end | |||
|cluster_id=chr16:15932105..15932131,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_3_at_AB384538_5end | |||
|id=chr16:15932105..15932131,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.42e-18;2!UBERON:0006965;1.88e-17;2!UBERON:0006603;1.31e-10;65!UBERON:0009143;4.46e-10;1!UBERON:0004874;4.86e-10;1!UBERON:0005754;5.54e-10;1!UBERON:0006242;8.90e-10;1!UBERON:0001045;2.08e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-50!115;UBERON:0006947!1.64e-11!3;UBERON:0004054!1.64e-11!3;UBERON:0003135!5.99e-11!11;UBERON:0005904!1.01e-08!4;UBERON:0001007!5.64e-08!155;UBERON:0001555!5.64e-08!155;UBERON:0007026!5.64e-08!155;UBERON:0004921!6.04e-08!129;UBERON:0004185!6.04e-08!129;UBERON:0000059!7.44e-08!11;UBERON:0005409!1.44e-07!35;UBERON:0002950!2.31e-07!2;UBERON:0001891!2.31e-07!2;UBERON:0009616!2.31e-07!2;UBERON:0003127!2.46e-07!2;UBERON:0000481!2.69e-07!347;UBERON:0002360!3.75e-07!2;UBERON:0000094!3.75e-07!2;UBERON:0007645!3.75e-07!2;UBERON:0003101!6.97e-07!22;UBERON:0000079!6.97e-07!22;UBERON:0004119!7.76e-07!169;UBERON:0000925!7.76e-07!169;UBERON:0006595!7.76e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.41e-26;3!UBERON:0004054;7.41e-26;3!UBERON:0005904;1.47e-19;4!UBERON:0000059;1.34e-18;11!UBERON:0005409;8.05e-17;22!UBERON:0000160;3.98e-16;17!UBERON:0001155;5.85e-15;9!UBERON:0004175;6.83e-14;21!UBERON:0004921;1.25e-13;33!UBERON:0003135;1.43e-12;11!UBERON:0000989;4.86e-10;1!UBERON:0008811;4.86e-10;1!UBERON:0000998;5.54e-10;1!UBERON:0006868;5.54e-10;1!UBERON:0001000;8.90e-10;1!UBERON:0000996;8.90e-10;1!UBERON:0005352;8.90e-10;1!UBERON:0006834;1.31e-09;1!UBERON:0002146;1.31e-09;1!UBERON:0001301;1.31e-09;1!UBERON:0005623;1.31e-09;1!UBERON:0003101;1.61e-09;22!UBERON:0000079;1.61e-09;22!UBERON:0001154;2.08e-09;1!UBERON:0001153;2.08e-09;1!UBERON:0009854;2.08e-09;1!UBERON:0000058;3.82e-08;10!UBERON:0003133;1.76e-07;44!UBERON:0004907;2.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.78e-26,3;UBERON:0004054,8.78e-26,3;UBERON:0007023,3.00e-23,114;UBERON:0005904,1.67e-19,4;UBERON:0000059,1.13e-18,11;UBERON:0000160,3.58e-16,17;UBERON:0001155,5.34e-15,9;UBERON:0005409,7.62e-15,25;UBERON:0003135,1.52e-12,11;UBERON:0004175,1.35e-11,25;UBERON:0001046,6.99e-11,19;UBERON:0003064,1.61e-10,28;UBERON:0005156,3.57e-10,59;UBERON:0000990,3.57e-10,59;UBERON:0003133,4.30e-10,48;UBERON:0000989,4.87e-10,1;UBERON:0008811,4.87e-10,1;UBERON:0006258,4.87e-10,1;UBERON:0005876,4.87e-10,1;UBERON:0004874,4.87e-10,1;UBERON:0000998,5.31e-10,1;UBERON:0006868,5.31e-10,1;UBERON:0000996,8.91e-10,1;UBERON:0001000,1.06e-09,1;UBERON:0005352,1.06e-09,1;UBERON:0006834,1.25e-09,1;UBERON:0001301,1.36e-09,1;UBERON:0002146,1.48e-09,1;UBERON:0005623,1.48e-09,1;UBERON:0003101,1.65e-09,22;UBERON:0000079,1.65e-09,22;UBERON:0001154,2.46e-09,1;UBERON:0001153,2.46e-09,1;UBERON:0001045,2.46e-09,1;UBERON:0004876,1.64e-07,11;UBERON:0004907,2.23e-07,5 | |||
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| ||
|short_description=p3@AB384538 | |||
}} | }} |
Latest revision as of 06:39, 25 July 2015
Short description: | p3@AB384538 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB384538_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_AB384538_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.78e-26 | 3 |
internal male genitalia | 8.78e-26 | 3 |
adult organism | 3.00e-23 | 114 |
duct of male reproductive system | 1.67e-19 | 4 |
large intestine | 1.13e-18 | 11 |
intestine | 3.58e-16 | 17 |
colon | 5.34e-15 | 9 |
gastrointestinal system | 7.62e-15 | 25 |
male reproductive organ | 1.52e-12 | 11 |
internal genitalia | 1.35e-11 | 25 |
hindgut | 6.99e-11 | 19 |
intermediate mesoderm | 1.61e-10 | 28 |
reproductive structure | 3.57e-10 | 59 |
reproductive system | 3.57e-10 | 59 |
reproductive organ | 4.30e-10 | 48 |
penis | 4.87e-10 | 1 |
intromittent organ | 4.87e-10 | 1 |
lateral plate mesenchyme | 4.87e-10 | 1 |
undifferentiated genital tubercle | 4.87e-10 | 1 |
somatopleure | 4.87e-10 | 1 |
seminal vesicle | 5.31e-10 | 1 |
seminal fluid secreting gland | 5.31e-10 | 1 |
vagina | 8.91e-10 | 1 |
vas deferens | 1.06e-09 | 1 |
spermatic cord | 1.06e-09 | 1 |
uterus or analog | 1.25e-09 | 1 |
epididymis | 1.36e-09 | 1 |
pulmonary valve | 1.48e-09 | 1 |
semi-lunar valve | 1.48e-09 | 1 |
male organism | 1.65e-09 | 22 |
male reproductive system | 1.65e-09 | 22 |
vermiform appendix | 2.46e-09 | 1 |
caecum | 2.46e-09 | 1 |
midgut | 2.46e-09 | 1 |
urogenital ridge | 1.64e-07 | 11 |
lower digestive tract | 2.23e-07 | 5 |