FFCP PHASE1:Hg19::chr9:139890151..139890199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9022 | |EntrezGene=9022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2064 | |HGNC=2064 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480181_5end | |association_with_transcript=0bp_to_ENST00000480181_5end | ||
|cluster_id=chr9:139890151..139890199,- | |||
|description=CAGE_peak_2_at_CLIC3_5end | |description=CAGE_peak_2_at_CLIC3_5end | ||
|id=chr9:139890151..139890199,- | |id=chr9:139890151..139890199,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.60e-14;19!CL:0000153;2.82e-10;9!CL:0000447;2.82e-10;9!CL:0000138;3.72e-08;6!CL:0002334;7.91e-08;12!CL:0002580;2.50e-07;3!CL:0002577;4.16e-07;3!CL:0000327;4.66e-07;15!CL:0002579;6.31e-07;3!CL:0002615;6.94e-07;3!CL:0000136;8.24e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.94e-14,19;CL:0000153,2.62e-10,9;CL:0000447,2.62e-10,9;CL:0000136,1.90e-09,15;CL:0000058,3.44e-08,6;CL:0000138,3.44e-08,6;CL:0002334,7.76e-08,12;CL:0000057,1.45e-07,76;CL:0002580,2.51e-07,3;CL:0002577,4.02e-07,3;CL:0000327,4.11e-07,15;CL:0002579,6.04e-07,3;CL:0002615,6.65e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.35e-11!14;UBERON:0000158!1.35e-11!14;UBERON:0007023!5.72e-09!115;UBERON:0004923!6.31e-09!57;UBERON:0000478!1.10e-07!24;UBERON:0003124!4.78e-07!7;UBERON:0000475!4.96e-07!365;UBERON:0004871!9.24e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!1.35e-11!14;UBERON:0000158!1.35e-11!14;UBERON:0007023!5.72e-09!115;UBERON:0004923!6.31e-09!57;UBERON:0000478!1.10e-07!24;UBERON:0003124!4.78e-07!7;UBERON:0000475!4.96e-07!365;UBERON:0004871!9.24e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.94e-14;10!UBERON:0000158;4.94e-14;10!UBERON:0004457;6.61e-14;9!UBERON:0000042;6.61e-14;9!UBERON:0000478;3.30e-12;24!UBERON:0003688;3.63e-12;6!UBERON:0002358;3.63e-12;6!UBERON:0003684;3.63e-12;6!UBERON:0001178;3.63e-12;6!UBERON:0000310;9.20e-12;10!UBERON:0001443;1.58e-10;11!UBERON:0000305;2.68e-09;7!UBERON:0001987;3.02e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.41e-20,14;UBERON:0000158,1.41e-20,14;UBERON:0003124,2.95e-13,7;UBERON:0000478,3.07e-12,24;UBERON:0003688,3.33e-12,6;UBERON:0002358,3.33e-12,6;UBERON:0003684,3.33e-12,6;UBERON:0001178,3.33e-12,6;UBERON:0004923,4.59e-12,66;UBERON:0000310,7.48e-12,10;UBERON:0001443,1.32e-10,11;UBERON:0004871,1.88e-10,8;UBERON:0004457,5.62e-10,12;UBERON:0000042,5.62e-10,12;UBERON:0000305,3.50e-09,7;UBERON:0001987,2.10e-08,4;UBERON:0004340,2.10e-08,4 | |||
|phase1_expression=13.4442000660212,7.06531728840244,12.4039875604455,24.0175916047513,4.91657203870017,12.2127393374052,7.59899634504932,0,0,0.737201809504527,13.2582221914761,7.20856528029568,6.33040747748289,0.247532705920093,0.994192127183747,0,0,0,0,0.984968464614303,1.42800483870977,0,0,0,0.251085279189606,0,0,0,0,0.383829398097213,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0,0.127986611154418,0,0,0,0,0.267440195783507,0,4.87613732627923,0,0.12786256184353,18.7948359239974,4.51204119572301,20.1336661355545,3.9764297352555,3.89307896242109,0,0.443458794925128,0.175669571386252,0.72038491523742,0,0.741568885568859,0,0.174129737299267,0,2.8618874916641,0.571994910780128,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0.993943903390637,0.506522046658319,0,2.0078563452417,1.41867352879343,1.68203280042692,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.30648779579902,0.751190294532984,0.113432183160021,4.48474089222155,0.213557388818567,0.423863802319124,4.50136644126603,0.412210116953756,3.60696756063881,0.744467425326359,5.56961896396179,7.69752340773469,5.04867548488229,0.552299391853796,3.39456719319505,1.77504796258307,2.11579406278045,2.03472710772585,0.57978255948989,0.545492241181669,0,0,0,0,0.10366105501537,0,0,0,0,0,0.928735856063958,2.16563844500876,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0.245976877086227,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0,0,0,0,0,5.53143078571493,1.71697232418975,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,1.04007436911366,1.02882949704857,0,1.3321108950805,0.714889968290738,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0.579125226670317,0.821905290201534,0.537182889719687,0,0.394061520403854,0.215627574859517,1.02674429023799,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0.601892199455438,0,1.03473071292505,0.664225598535437,0.553107505625109,0,0.391602314925481,0.686286847621712,0.206768026122887,0.431428401637234,0.533637789017222,13.9438682865279,16.6435439510497,13.6075631998356,22.8259183193275,24.55391572609,30.3112901987719,12.8139149255701,22.515118958935,5.95159508231348,31.1677939534481,0,0.177561725313127,0,0,0,0,2.80709058424599,0.0920809889358963,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,1.62567862526312,0.501689773854853,0,0,0,0,0,1.02580050046556,1.31205858279882,0.325378394664303,1.23649213977267,0.366277859273374,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.340906509664404,0.178064071293475,0.330569830721956,0,0,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.6196469961995,0,0,0.196498082026242,0,0,30.6106071181613,15.1475650761555,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,1.60044461320525,0,0,0.443430153536676,0,0,0,1.13929437434833,0.238231775457789,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,8.31501106331388,3.99308912729002,0,0.140669416410513,0,0,0,1.39473591775749,0.828851746593443,0.251932747854276,0,0,0.311039587661807,0.179736702294654,0,0,0.295930216910801,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0,4.54791999980218,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0.295547618953547,0.87754158861589,0,0,0.692552326534174,1.59518878185802,0.922255617552241,1.16684937732704,1.95565269459615,6.69902435437031,2.28993983504656,12.7928346244472,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,1.83309043480088,0,0,0,0.269604531922708,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,1.21491816834592,0.391969589657511,0,1.22308667769421,0,0.290268993867255,0.292357268344742,0.246346371159628,3.39461557709468,0,2.71176888936639,0,0,0.316553979779393,0.586654148204409,0.320635281006135,0.640358984218058,3.59657297247834,0,0,0,0,0,0,0.407712618220842,1.04602846312333,0,0,0,0,0,0,0,3.90995361781156,0.916641696046735,0.717873024576814,1.39775300349294,0,0.446342914883745,1.00775208730089,0,0,0,0,0.0674035438541849,0,0,0,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0.653174720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| ||
|short_description=p2@CLIC3 | |short_description=p2@CLIC3 | ||
}} | }} |
Latest revision as of 14:52, 16 September 2015
Short description: | p2@CLIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLIC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000480181_5end |
EntrezGene: | CLIC3 |
HGNC: | 2064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.94e-14 | 19 |
GAG secreting cell | 2.62e-10 | 9 |
carbohydrate secreting cell | 2.62e-10 | 9 |
fat cell | 1.90e-09 | 15 |
chondroblast | 3.44e-08 | 6 |
chondrocyte | 3.44e-08 | 6 |
preadipocyte | 7.76e-08 | 12 |
fibroblast | 1.45e-07 | 76 |
preadipocyte of the breast | 2.51e-07 | 3 |
placental epithelial cell | 4.02e-07 | 3 |
extracellular matrix secreting cell | 4.11e-07 | 15 |
omentum preadipocyte | 6.04e-07 | 3 |
adipocyte of omentum tissue | 6.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.41e-20 | 14 |
membranous layer | 1.41e-20 | 14 |
chorion | 2.95e-13 | 7 |
extraembryonic structure | 3.07e-12 | 24 |
omentum | 3.33e-12 | 6 |
peritoneum | 3.33e-12 | 6 |
abdominal cavity | 3.33e-12 | 6 |
visceral peritoneum | 3.33e-12 | 6 |
organ component layer | 4.59e-12 | 66 |
breast | 7.48e-12 | 10 |
chest | 1.32e-10 | 11 |
somatic layer of lateral plate mesoderm | 1.88e-10 | 8 |
cavity lining | 5.62e-10 | 12 |
serous membrane | 5.62e-10 | 12 |
amnion | 3.50e-09 | 7 |
placenta | 2.10e-08 | 4 |
allantois | 2.10e-08 | 4 |