FFCP PHASE1:Hg19::chr4:189081235..189081246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000502419_5end | |association_with_transcript=16bp_to_ENST00000502419_5end | ||
|cluster_id=chr4:189081235..189081246,+ | |||
|description=CAGE_peak_2_at_ENST00000502419_5end | |description=CAGE_peak_2_at_ENST00000502419_5end | ||
|id=chr4:189081235..189081246,+ | |id=chr4:189081235..189081246,+ | ||
|ontology_enrichment_celltype=CL:0002150!7.42e-16!3;CL:0000861!7.42e-16!3;CL:0002097!1.54e-11!2;CL:0002541!4.40e-08!3;CL:0000174!5.64e-08!3 | |ontology_enrichment_celltype=CL:0002150!7.42e-16!3;CL:0000861!7.42e-16!3;CL:0002097!1.54e-11!2;CL:0002541!4.40e-08!3;CL:0000174!5.64e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000054;9.27e-07;2!CL:0002097;9.27e-07;2!CL:0000137;9.27e-07;2!CL:0000092;9.27e-07;2!CL:1000415;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.20e-07,2;CL:0000137,7.20e-07,2;CL:0000092,7.20e-07,2;CL:0002097,8.06e-07,2;CL:1000415,8.52e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.95e-10;5!UBERON:0008814;6.07e-07;2!UBERON:0010056;6.07e-07;2 | |||
|ontology_enrichment_disease=DOID:0050687!7.29e-18!143;DOID:162!3.21e-14!235;DOID:14566!8.54e-14!239;DOID:305!2.13e-12!106;DOID:1749!8.81e-10!14;DOID:170!1.54e-08!6;DOID:6193!5.13e-07!1;DOID:0060085!6.43e-07!1;DOID:3165!6.43e-07!1;DOID:0060121!6.43e-07!1;DOID:2438!6.43e-07!1;DOID:4418!6.43e-07!1 | |ontology_enrichment_disease=DOID:0050687!7.29e-18!143;DOID:162!3.21e-14!235;DOID:14566!8.54e-14!239;DOID:305!2.13e-12!106;DOID:1749!8.81e-10!14;DOID:170!1.54e-08!6;DOID:6193!5.13e-07!1;DOID:0060085!6.43e-07!1;DOID:3165!6.43e-07!1;DOID:0060121!6.43e-07!1;DOID:2438!6.43e-07!1;DOID:4418!6.43e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.79e-13;14!DOID:6193;1.25e-12;1!DOID:0060085;2.91e-12;1!DOID:3165;2.91e-12;1!DOID:0060121;2.91e-12;1!DOID:2438;2.91e-12;1!DOID:4418;2.91e-12;1!DOID:3112;2.91e-12;1!DOID:170;3.25e-08;6!DOID:3350;6.07e-07;2!DOID:4074;9.27e-07;2!DOID:4905;9.27e-07;2!DOID:200;9.27e-07;2!DOID:4305;9.27e-07;2!DOID:3910;9.27e-07;2!DOID:4468;9.27e-07;2!DOID:3498;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.79e-13,106;DOID:1749,3.85e-13,14;DOID:6193,1.11e-12,1;DOID:0060085,1.75e-12,1;DOID:3165,1.75e-12,1;DOID:0060121,1.75e-12,1;DOID:2438,1.75e-12,1;DOID:4418,1.75e-12,1;DOID:3112,4.31e-12,1;DOID:0050687,3.31e-11,143;DOID:162,7.44e-10,235;DOID:14566,1.33e-09,239;DOID:170,3.25e-08,6;DOID:3350,5.73e-07,2;DOID:200,7.20e-07,2;DOID:4305,7.20e-07,2;DOID:4468,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!3.27e-10!5;UBERON:0004117!3.27e-10!5;UBERON:0007689!3.27e-10!5;UBERON:0007123!3.27e-10!5;UBERON:0003091!3.27e-10!5;UBERON:0000476!4.40e-08!3;UBERON:0000920!4.40e-08!3;UBERON:0002369!5.64e-08!3;UBERON:0001235!5.64e-08!3;UBERON:0006858!5.64e-08!3;UBERON:0000997!4.33e-07!1;UBERON:0005056!4.33e-07!1;UBERON:0001282!6.08e-07!1;UBERON:0009842!6.08e-07!1;UBERON:0003704!6.08e-07!1;UBERON:0001171!6.08e-07!1;UBERON:0001172!6.08e-07!1 | |ontology_enrichment_uberon=UBERON:0002046!3.27e-10!5;UBERON:0004117!3.27e-10!5;UBERON:0007689!3.27e-10!5;UBERON:0007123!3.27e-10!5;UBERON:0003091!3.27e-10!5;UBERON:0000476!4.40e-08!3;UBERON:0000920!4.40e-08!3;UBERON:0002369!5.64e-08!3;UBERON:0001235!5.64e-08!3;UBERON:0006858!5.64e-08!3;UBERON:0000997!4.33e-07!1;UBERON:0005056!4.33e-07!1;UBERON:0001282!6.08e-07!1;UBERON:0009842!6.08e-07!1;UBERON:0003704!6.08e-07!1;UBERON:0001171!6.08e-07!1;UBERON:0001172!6.08e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;7.44e-13;1!UBERON:0005056;7.44e-13;1!UBERON:0004176;7.44e-13;1!UBERON:0001282;1.25e-12;1!UBERON:0009842;1.25e-12;1!UBERON:0003704;1.25e-12;1!UBERON:0001171;1.25e-12;1!UBERON:0001172;1.25e-12;1!UBERON:0002046;6.95e-10;5!UBERON:0002294;2.91e-07;7!UBERON:0001173;2.91e-07;7!UBERON:0004903;9.27e-07;2!UBERON:0002173;9.27e-07;2!UBERON:0002186;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,7.89e-13,1;UBERON:0005056,7.89e-13,1;UBERON:0001282,1.57e-12,1;UBERON:0009842,1.57e-12,1;UBERON:0003704,1.57e-12,1;UBERON:0001171,1.57e-12,1;UBERON:0001172,1.57e-12,1;UBERON:0002046,8.13e-10,5;UBERON:0004117,8.13e-10,5;UBERON:0007689,8.13e-10,5;UBERON:0007123,8.13e-10,5;UBERON:0003091,8.13e-10,5 | |||
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|short_description=p2@ENST00000502419 | |short_description=p2@ENST00000502419 | ||
}} | }} |
Latest revision as of 04:12, 30 July 2015
Short description: | p2@ENST00000502419 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000502419_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000502419_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.20e-07 | 2 |
osteocyte | 7.20e-07 | 2 |
osteoclast | 7.20e-07 | 2 |
cortical cell of adrenal gland | 8.06e-07 | 2 |
epithelial cell of gall bladder | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 7.89e-13 | 1 |
external female genitalia | 7.89e-13 | 1 |
intralobular bile duct | 1.57e-12 | 1 |
acinus | 1.57e-12 | 1 |
intrahepatic bile duct | 1.57e-12 | 1 |
portal lobule | 1.57e-12 | 1 |
hepatic acinus | 1.57e-12 | 1 |
thyroid gland | 8.13e-10 | 5 |
pharyngeal pouch | 8.13e-10 | 5 |
thyroid diverticulum | 8.13e-10 | 5 |
pharyngeal pouch 2 | 8.13e-10 | 5 |
thyroid primordium | 8.13e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.79e-13 | 106 |
squamous cell carcinoma | 3.85e-13 | 14 |
epithelioid sarcoma | 1.11e-12 | 1 |
organ system benign neoplasm | 1.75e-12 | 1 |
skin benign neoplasm | 1.75e-12 | 1 |
integumentary system benign neoplasm | 1.75e-12 | 1 |
dermis tumor | 1.75e-12 | 1 |
cutaneous fibrous histiocytoma | 1.75e-12 | 1 |
papillary adenocarcinoma | 4.31e-12 | 1 |
cell type cancer | 3.31e-11 | 143 |
cancer | 7.44e-10 | 235 |
disease of cellular proliferation | 1.33e-09 | 239 |
endocrine gland cancer | 3.25e-08 | 6 |
mesenchymal cell neoplasm | 5.73e-07 | 2 |
giant cell tumor | 7.20e-07 | 2 |
bone giant cell tumor | 7.20e-07 | 2 |
clear cell adenocarcinoma | 9.54e-07 | 2 |