FFCP PHASE1:Hg19::chr9:131872789..131872800,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1384 | |EntrezGene=1384 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2342 | |HGNC=2342 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZBP5 | |UniProt=B7ZBP5 | ||
|association_with_transcript=167bp_to_ENST00000455830_5end | |association_with_transcript=167bp_to_ENST00000455830_5end | ||
|cluster_id=chr9:131872789..131872800,- | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_5_at_CRAT_5end | |description=CAGE_peak_5_at_CRAT_5end | ||
|id=chr9:131872789..131872800,- | |id=chr9:131872789..131872800,- | ||
|ontology_enrichment_celltype=CL:0000181!2.46e-18!12;CL:0000417!2.46e-18!12;CL:0000668!2.46e-18!12;CL:0000414!2.46e-18!12;CL:0000412!2.46e-18!12;CL:0000182!2.46e-18!12 | |ontology_enrichment_celltype=CL:0000181!2.46e-18!12;CL:0000417!2.46e-18!12;CL:0000668!2.46e-18!12;CL:0000414!2.46e-18!12;CL:0000412!2.46e-18!12;CL:0000182!2.46e-18!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.24e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.24e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.16e-14!19;UBERON:0006925!4.16e-14!19;UBERON:0008836!4.16e-14!19;UBERON:0008835!6.13e-12!22;UBERON:0003894!6.13e-12!22;UBERON:0002365!9.30e-12!31;UBERON:0002330!9.30e-12!31;UBERON:0009854!2.42e-11!23;UBERON:0007499!2.71e-10!25;UBERON:0009497!2.71e-10!25;UBERON:0000015!2.71e-10!25;UBERON:0002423!2.71e-10!25;UBERON:0006235!2.71e-10!25;UBERON:0004161!2.71e-10!25;UBERON:0005057!7.88e-10!26;UBERON:0009856!7.88e-10!26;UBERON:0002368!1.94e-08!35;UBERON:0004921!1.07e-07!129;UBERON:0004185!1.07e-07!129;UBERON:0002360!1.37e-07!2;UBERON:0000094!1.37e-07!2;UBERON:0007645!1.37e-07!2;UBERON:0000949!2.22e-07!45;UBERON:0002530!2.92e-07!59;UBERON:0001007!4.58e-07!155;UBERON:0001555!4.58e-07!155;UBERON:0007026!4.58e-07!155;UBERON:0005172!5.33e-07!55;UBERON:0005173!5.33e-07!55;UBERON:0003929!5.45e-07!54 | |ontology_enrichment_uberon=UBERON:0002107!4.16e-14!19;UBERON:0006925!4.16e-14!19;UBERON:0008836!4.16e-14!19;UBERON:0008835!6.13e-12!22;UBERON:0003894!6.13e-12!22;UBERON:0002365!9.30e-12!31;UBERON:0002330!9.30e-12!31;UBERON:0009854!2.42e-11!23;UBERON:0007499!2.71e-10!25;UBERON:0009497!2.71e-10!25;UBERON:0000015!2.71e-10!25;UBERON:0002423!2.71e-10!25;UBERON:0006235!2.71e-10!25;UBERON:0004161!2.71e-10!25;UBERON:0005057!7.88e-10!26;UBERON:0009856!7.88e-10!26;UBERON:0002368!1.94e-08!35;UBERON:0004921!1.07e-07!129;UBERON:0004185!1.07e-07!129;UBERON:0002360!1.37e-07!2;UBERON:0000094!1.37e-07!2;UBERON:0007645!1.37e-07!2;UBERON:0000949!2.22e-07!45;UBERON:0002530!2.92e-07!59;UBERON:0001007!4.58e-07!155;UBERON:0001555!4.58e-07!155;UBERON:0007026!4.58e-07!155;UBERON:0005172!5.33e-07!55;UBERON:0005173!5.33e-07!55;UBERON:0003929!5.45e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.66e-36;4!UBERON:0000160;5.92e-18;17!UBERON:0005409;3.81e-14;22!UBERON:0002107;3.57e-10;19!UBERON:0006925;3.57e-10;19!UBERON:0004921;2.58e-08;33!UBERON:0002114;7.02e-08;2!UBERON:0002423;7.14e-08;25!UBERON:0001007;1.22e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.92e-36,4;UBERON:0000160,6.91e-18,17;UBERON:0005409,1.63e-12,25;UBERON:0002107,3.57e-10,19;UBERON:0006925,3.57e-10,19;UBERON:0008836,3.57e-10,19;UBERON:0008835,7.21e-09,22;UBERON:0003894,7.21e-09,22;UBERON:0009854,1.65e-08,23;UBERON:0004921,6.16e-08,118;UBERON:0007499,7.14e-08,25;UBERON:0009497,7.14e-08,25;UBERON:0000015,7.14e-08,25;UBERON:0002423,7.14e-08,25;UBERON:0006235,7.14e-08,25;UBERON:0004161,7.14e-08,25;UBERON:0002114,8.29e-08,2;UBERON:0009856,1.36e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,2.53510069643662,0.982827216677626,2.36315962672562,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.539228350833479,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,1.20645552710496,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,4.39656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0.109940516745429,0,3.70435958918134,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,2.53510069643662,0.982827216677626,2.36315962672562,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.539228350833479,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,1.20645552710496,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,4.39656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0.109940516745429,0,3.70435958918134,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p5@CRAT | |short_description=p5@CRAT | ||
}} | }} |
Latest revision as of 21:48, 15 September 2015
Short description: | p5@CRAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CRAT_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 167bp_to_ENST00000455830_5end |
EntrezGene: | CRAT |
HGNC: | 2342 |
UniProt: | B7ZBP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.92e-36 | 4 |
intestine | 6.91e-18 | 17 |
gastrointestinal system | 1.63e-12 | 25 |
liver | 3.57e-10 | 19 |
digestive gland | 3.57e-10 | 19 |
liver bud | 3.57e-10 | 19 |
hepatic diverticulum | 7.21e-09 | 22 |
liver primordium | 7.21e-09 | 22 |
digestive tract diverticulum | 1.65e-08 | 23 |
subdivision of digestive tract | 6.16e-08 | 118 |
epithelial sac | 7.14e-08 | 25 |
epithelium of foregut-midgut junction | 7.14e-08 | 25 |
anatomical boundary | 7.14e-08 | 25 |
hepatobiliary system | 7.14e-08 | 25 |
foregut-midgut junction | 7.14e-08 | 25 |
septum transversum | 7.14e-08 | 25 |
duodenum | 8.29e-08 | 2 |
sac | 1.36e-07 | 26 |