FFCP PHASE1:Hg19::chr4:120549851..120549880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt=O76074 | |UniProt=O76074 | ||
|association_with_transcript=100bp_to_NM_001083,uc003idh.2_5end | |association_with_transcript=100bp_to_NM_001083,uc003idh.2_5end | ||
|cluster_id=chr4:120549851..120549880,- | |||
|coexpression_cluster_id=C1933 | |||
|description=CAGE_peak_1_at_PDE5A_5end | |description=CAGE_peak_1_at_PDE5A_5end | ||
|id=chr4:120549851..120549880,- | |id=chr4:120549851..120549880,- | ||
|ontology_enrichment_celltype=CL:0000055!6.46e-15!180;CL:0000057!2.93e-10!75;CL:0000393!7.36e-07!60;CL:0000211!7.36e-07!60 | |ontology_enrichment_celltype=CL:0000055!6.46e-15!180;CL:0000057!2.93e-10!75;CL:0000393!7.36e-07!60;CL:0000211!7.36e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.08e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!9.93e-11!347;UBERON:0001007!7.95e-10!155;UBERON:0001555!7.95e-10!155;UBERON:0007026!7.95e-10!155;UBERON:0004119!4.47e-09!169;UBERON:0000925!4.47e-09!169;UBERON:0006595!4.47e-09!169;UBERON:0000468!1.06e-07!659;UBERON:0003104!4.31e-07!238;UBERON:0009142!4.31e-07!238;UBERON:0000475!5.84e-07!365;UBERON:0000914!7.21e-07!83;UBERON:0002329!7.21e-07!83;UBERON:0003077!7.21e-07!83;UBERON:0003059!7.21e-07!83;UBERON:0007282!7.21e-07!83;UBERON:0009618!7.21e-07!83;UBERON:0007285!7.21e-07!83;UBERON:0002385!7.55e-07!63;UBERON:0001015!7.55e-07!63;UBERON:0000383!7.55e-07!63 | |ontology_enrichment_uberon=UBERON:0000481!9.93e-11!347;UBERON:0001007!7.95e-10!155;UBERON:0001555!7.95e-10!155;UBERON:0007026!7.95e-10!155;UBERON:0004119!4.47e-09!169;UBERON:0000925!4.47e-09!169;UBERON:0006595!4.47e-09!169;UBERON:0000468!1.06e-07!659;UBERON:0003104!4.31e-07!238;UBERON:0009142!4.31e-07!238;UBERON:0000475!5.84e-07!365;UBERON:0000914!7.21e-07!83;UBERON:0002329!7.21e-07!83;UBERON:0003077!7.21e-07!83;UBERON:0003059!7.21e-07!83;UBERON:0007282!7.21e-07!83;UBERON:0009618!7.21e-07!83;UBERON:0007285!7.21e-07!83;UBERON:0002385!7.55e-07!63;UBERON:0001015!7.55e-07!63;UBERON:0000383!7.55e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.51e-10;22!UBERON:0000160;4.00e-10;17!UBERON:0004921;3.87e-09;33!UBERON:0000059;1.61e-07;11!UBERON:0000075;6.52e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.29e-10,145;UBERON:0001555,2.29e-10,145;UBERON:0007026,2.29e-10,145;UBERON:0000160,3.70e-10,17;UBERON:0004119,1.39e-08,160;UBERON:0000925,1.39e-08,160;UBERON:0006595,1.39e-08,160;UBERON:0005409,2.23e-08,25;UBERON:0004921,1.29e-07,118;UBERON:0000059,1.41e-07,11;UBERON:0000075,6.30e-07,16;UBERON:0003104,6.58e-07,160;UBERON:0009142,6.58e-07,160 | |||
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| ||
|short_description=p1@PDE5A | |short_description=p1@PDE5A | ||
}} | }} |
Latest revision as of 23:01, 24 September 2015
Short description: | p1@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE5A_5end |
Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
Association with transcript: | 100bp_to_NM_001083, uc003idh.2_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.08e-10 | 76 |
Ontology term | p-value | n |
---|---|---|
digestive system | 2.29e-10 | 145 |
digestive tract | 2.29e-10 | 145 |
primitive gut | 2.29e-10 | 145 |
intestine | 3.70e-10 | 17 |
endoderm-derived structure | 1.39e-08 | 160 |
endoderm | 1.39e-08 | 160 |
presumptive endoderm | 1.39e-08 | 160 |
gastrointestinal system | 2.23e-08 | 25 |
subdivision of digestive tract | 1.29e-07 | 118 |
large intestine | 1.41e-07 | 11 |
subdivision of skeletal system | 6.30e-07 | 16 |
mesenchyme | 6.58e-07 | 160 |
entire embryonic mesenchyme | 6.58e-07 | 160 |