FFCP PHASE1:Hg19::chr4:10030724..10030740,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56606 | |EntrezGene=56606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13446 | |HGNC=13446 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=183bp_to_ENST00000509214_5end | |association_with_transcript=183bp_to_ENST00000509214_5end | ||
|cluster_id=chr4:10030724..10030740,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_9_at_SLC2A9_5end | |description=CAGE_peak_9_at_SLC2A9_5end | ||
|id=chr4:10030724..10030740,- | |id=chr4:10030724..10030740,- | ||
|ontology_enrichment_celltype=CL:0000746!2.15e-09!3;CL:0000513!2.15e-09!3;CL:0000737!3.02e-07!4 | |ontology_enrichment_celltype=CL:0000746!2.15e-09!3;CL:0000513!2.15e-09!3;CL:0000737!3.02e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.04e-08;3!CL:0002615;1.35e-08;3!CL:0000737;7.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.04e-08,3;CL:0000513,1.04e-08,3;CL:0002615,1.51e-08,3;CL:0000737,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.34e-23;1!UBERON:0005754;1.67e-23;1!UBERON:0006298;2.62e-23;1!UBERON:0007297;1.85e-12;2!CL:0000513;1.04e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@SLC2A9 | |short_description=p9@SLC2A9 | ||
}} | }} |
Latest revision as of 01:24, 20 September 2015
Short description: | p9@SLC2A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC2A9_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 183bp_to_ENST00000509214_5end |
EntrezGene: | SLC2A9 |
HGNC: | 13446 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.04e-08 | 3 |
cardiac muscle myoblast | 1.04e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
striated muscle cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.00e-45 | 2 |
saliva-secreting gland | 6.72e-34 | 6 |
gland of oral region | 6.72e-34 | 6 |
gland of foregut | 6.72e-34 | 6 |
oral gland | 6.72e-34 | 6 |
oral cavity | 6.72e-34 | 6 |
parotid gland | 1.34e-23 | 1 |
cheek | 1.34e-23 | 1 |
parotid gland primordium | 1.34e-23 | 1 |
seminal vesicle | 1.67e-23 | 1 |
seminal fluid secreting gland | 1.67e-23 | 1 |
submandibular gland | 2.62e-23 | 1 |
submandibular gland primordium | 2.62e-23 | 1 |
gland of gut | 1.12e-20 | 10 |
gland | 1.62e-13 | 59 |
midface | 1.65e-12 | 2 |
pineal body | 2.90e-12 | 2 |
regional part of epithalamus | 2.90e-12 | 2 |
secretory circumventricular organ | 2.90e-12 | 2 |
circumventricular organ | 2.90e-12 | 2 |
epithalamus | 2.90e-12 | 2 |
exocrine gland | 7.36e-12 | 31 |
exocrine system | 7.36e-12 | 31 |
oral opening | 8.86e-10 | 22 |
anatomical cavity | 2.98e-09 | 61 |
male genital duct | 9.66e-09 | 3 |
internal male genitalia | 9.66e-09 | 3 |
mouth | 1.46e-07 | 29 |
stomodeum | 1.46e-07 | 29 |
duct of male reproductive system | 7.27e-07 | 4 |
gland of diencephalon | 9.11e-07 | 4 |
neuroendocrine gland | 9.11e-07 | 4 |
regional part of diencephalon | 9.11e-07 | 4 |