FFCP PHASE1:Hg19::chr8:57354324..57354335,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57354324..57354335,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354324..57354335,- | |description=CAGE_peak_at_chr8:57354324..57354335,- | ||
|id=chr8:57354324..57354335,- | |id=chr8:57354324..57354335,- | ||
|ontology_enrichment_celltype=CL:0000135!2.65e-14!3;CL:0000386!2.65e-14!3;CL:0000388!2.65e-14!3;CL:0002552!4.22e-14!5;CL:0000153!2.21e-12!9;CL:0000447!2.21e-12!9;CL:0000667!2.65e-12!6;CL:0000058!2.65e-12!6;CL:0000138!2.65e-12!6;CL:0000499!1.93e-09!27;CL:0000327!7.66e-08!14;CL:0002556!1.76e-07!6 | |ontology_enrichment_celltype=CL:0000135!2.65e-14!3;CL:0000386!2.65e-14!3;CL:0000388!2.65e-14!3;CL:0002552!4.22e-14!5;CL:0000153!2.21e-12!9;CL:0000447!2.21e-12!9;CL:0000667!2.65e-12!6;CL:0000058!2.65e-12!6;CL:0000138!2.65e-12!6;CL:0000499!1.93e-09!27;CL:0000327!7.66e-08!14;CL:0002556!1.76e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002556;2.95e-18;6!CL:0000135;1.08e-16;3!CL:0000388;1.08e-16;3!CL:0000153;1.70e-12;9!CL:0000447;1.70e-12;9!CL:0000499;1.60e-10;28!CL:0002552;2.58e-10;5!CL:0000138;5.35e-09;6!CL:0000327;1.04e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,3.13e-18,6;CL:0000135,1.00e-16,3;CL:0000388,1.00e-16,3;CL:0000153,1.98e-12,9;CL:0000447,1.98e-12,9;CL:0000499,1.70e-10,28;CL:0002552,2.84e-10,5;CL:0000058,5.35e-09,6;CL:0000138,5.35e-09,6;CL:0000327,1.14e-07,15;CL:0000057,6.05e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.82e-13;1!UBERON:0003852;1.82e-13;1!UBERON:0010122;4.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr8:57354324..57354335,- | |short_description=p@chr8:57354324..57354335,- | ||
}} | }} |
Latest revision as of 19:03, 31 July 2015
Short description: | p@chr8:57354324..57354335, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354324..57354335, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 3.13e-18 | 6 |
fibrocyte | 1.00e-16 | 3 |
tendon cell | 1.00e-16 | 3 |
GAG secreting cell | 1.98e-12 | 9 |
carbohydrate secreting cell | 1.98e-12 | 9 |
stromal cell | 1.70e-10 | 28 |
fibroblast of gingiva | 2.84e-10 | 5 |
chondroblast | 5.35e-09 | 6 |
chondrocyte | 5.35e-09 | 6 |
extracellular matrix secreting cell | 1.14e-07 | 15 |
fibroblast | 6.05e-07 | 76 |