FFCP PHASE1:Hg19::chr8:145640522..145640534,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55630 | |EntrezGene=55630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17129 | |HGNC=17129 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=223bp_to_uc003zco.2_5end | |association_with_transcript=223bp_to_uc003zco.2_5end | ||
|cluster_id=chr8:145640522..145640534,- | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_12_at_SLC39A4_5end | |description=CAGE_peak_12_at_SLC39A4_5end | ||
|id=chr8:145640522..145640534,- | |id=chr8:145640522..145640534,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002569;7.25e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.55e-11!20;UBERON:0002619!1.72e-10!22;UBERON:0002791!2.87e-09!33;UBERON:0000956!3.18e-09!25;UBERON:0000203!3.18e-09!25;UBERON:0000160!4.86e-09!27;UBERON:0001893!5.56e-09!34;UBERON:0001000!1.18e-08!1;UBERON:0005352!1.18e-08!1;UBERON:0002902!2.46e-08!1;UBERON:0009899!2.46e-08!1;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0007023!5.62e-08!115;UBERON:0001155!7.59e-08!9;UBERON:0002780!2.36e-07!41;UBERON:0001890!2.36e-07!41;UBERON:0006240!2.36e-07!41;UBERON:0003080!3.66e-07!42;UBERON:0001869!3.68e-07!32;UBERON:0005409!6.60e-07!35 | |ontology_enrichment_uberon=UBERON:0001950!1.55e-11!20;UBERON:0002619!1.72e-10!22;UBERON:0002791!2.87e-09!33;UBERON:0000956!3.18e-09!25;UBERON:0000203!3.18e-09!25;UBERON:0000160!4.86e-09!27;UBERON:0001893!5.56e-09!34;UBERON:0001000!1.18e-08!1;UBERON:0005352!1.18e-08!1;UBERON:0002902!2.46e-08!1;UBERON:0009899!2.46e-08!1;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0007023!5.62e-08!115;UBERON:0001155!7.59e-08!9;UBERON:0002780!2.36e-07!41;UBERON:0001890!2.36e-07!41;UBERON:0006240!2.36e-07!41;UBERON:0003080!3.66e-07!42;UBERON:0001869!3.68e-07!32;UBERON:0005409!6.60e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.52e-71;4!UBERON:0000160;1.37e-20;17!UBERON:0005409;2.57e-16;22!UBERON:0002114;1.71e-14;2!UBERON:0004921;1.67e-09;33!UBERON:0003422;7.25e-08;6!UBERON:0001871;5.38e-07;6!UBERON:0003104;6.39e-07;7!UBERON:0009142;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.52e-71,4;UBERON:0000160,1.37e-20,17;UBERON:0005409,1.55e-14,25;UBERON:0002114,1.83e-14,2;UBERON:0003422,7.25e-08,6;UBERON:0001871,5.38e-07,6 | |||
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|short_description=p12@SLC39A4 | |short_description=p12@SLC39A4 | ||
}} | }} |
Latest revision as of 01:51, 17 September 2015
Short description: | p12@SLC39A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC39A4_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | 223bp_to_uc003zco.2_5end |
EntrezGene: | SLC39A4 |
HGNC: | 17129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.52e-71 | 4 |
intestine | 1.37e-20 | 17 |
gastrointestinal system | 1.55e-14 | 25 |
duodenum | 1.83e-14 | 2 |
mesenchyme of umbilical cord | 7.25e-08 | 6 |
temporal lobe | 5.38e-07 | 6 |