FFCP PHASE1:Hg19::chr8:145149957..145150006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1537 | |EntrezGene=1537 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2579 | |HGNC=2579 | ||
|TSSclassifier=strong | |||
|UniProt=P08574 | |UniProt=P08574 | ||
|association_with_transcript=0bp_to_NM_001916,uc003zaz.3_5end | |association_with_transcript=0bp_to_NM_001916,uc003zaz.3_5end | ||
|cluster_id=chr8:145149957..145150006,+ | |||
|coexpression_cluster_id=C2145 | |||
|description=CAGE_peak_1_at_CYC1_5end | |description=CAGE_peak_1_at_CYC1_5end | ||
|id=chr8:145149957..145150006,+ | |id=chr8:145149957..145150006,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.70e-18!254;CL:0002321!2.44e-11!248;CL:0000220!4.23e-11!246;CL:0000548!1.87e-07!679;CL:0000004!1.87e-07!679;CL:0000255!1.87e-07!679;CL:0000012!3.62e-07!682 | |ontology_enrichment_celltype=CL:0000066!9.70e-18!254;CL:0002321!2.44e-11!248;CL:0000220!4.23e-11!246;CL:0000548!1.87e-07!679;CL:0000004!1.87e-07!679;CL:0000255!1.87e-07!679;CL:0000012!3.62e-07!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.11e-18,253;CL:0002321,2.69e-11,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.16e-16!239;DOID:162!1.43e-16!235;DOID:0050687!2.97e-12!143;DOID:305!7.89e-12!106;DOID:0050686!4.73e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.16e-16,239;DOID:162,1.43e-16,235;DOID:0050687,2.97e-12,143;DOID:305,7.89e-12,106;DOID:0050686,4.73e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.61e-15!238;UBERON:0009142!2.61e-15!238;UBERON:0000072!1.07e-10!46;UBERON:0001041!3.92e-10!98;UBERON:0002100!9.64e-10!216;UBERON:0000481!2.77e-09!347;UBERON:0008947!2.80e-09!38;UBERON:0003258!2.80e-09!38;UBERON:0003914!1.16e-08!118;UBERON:0000065!3.58e-08!53;UBERON:0004921!5.39e-08!129;UBERON:0004185!5.39e-08!129;UBERON:0001048!6.66e-08!168;UBERON:0000077!1.28e-07!130;UBERON:0005177!1.64e-07!107;UBERON:0004119!1.91e-07!169;UBERON:0000925!1.91e-07!169;UBERON:0006595!1.91e-07!169;UBERON:0000490!2.49e-07!138;UBERON:0004290!2.55e-07!70;UBERON:0000486!3.27e-07!82;UBERON:0005181!5.61e-07!35;UBERON:0005256!7.92e-07!143;UBERON:0001737!8.65e-07!9 | |ontology_enrichment_uberon=UBERON:0003104!2.61e-15!238;UBERON:0009142!2.61e-15!238;UBERON:0000072!1.07e-10!46;UBERON:0001041!3.92e-10!98;UBERON:0002100!9.64e-10!216;UBERON:0000481!2.77e-09!347;UBERON:0008947!2.80e-09!38;UBERON:0003258!2.80e-09!38;UBERON:0003914!1.16e-08!118;UBERON:0000065!3.58e-08!53;UBERON:0004921!5.39e-08!129;UBERON:0004185!5.39e-08!129;UBERON:0001048!6.66e-08!168;UBERON:0000077!1.28e-07!130;UBERON:0005177!1.64e-07!107;UBERON:0004119!1.91e-07!169;UBERON:0000925!1.91e-07!169;UBERON:0006595!1.91e-07!169;UBERON:0000490!2.49e-07!138;UBERON:0004290!2.55e-07!70;UBERON:0000486!3.27e-07!82;UBERON:0005181!5.61e-07!35;UBERON:0005256!7.92e-07!143;UBERON:0001737!8.65e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;4.97e-10;37!UBERON:0001737;8.55e-07;9!UBERON:0001557;8.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.72e-11,199;UBERON:0000072,2.83e-10,47;UBERON:0008947,2.80e-09,38;UBERON:0003258,2.80e-09,38;UBERON:0001041,3.93e-09,87;UBERON:0003914,7.40e-09,117;UBERON:0007503,1.17e-08,78;UBERON:0000490,1.44e-08,148;UBERON:0005177,1.75e-08,101;UBERON:0000065,7.28e-08,54;UBERON:0003104,1.51e-07,160;UBERON:0009142,1.51e-07,160;UBERON:0002329,4.38e-07,71;UBERON:0003059,4.38e-07,71;UBERON:0007282,4.38e-07,71;UBERON:0004290,4.38e-07,71;UBERON:0009618,4.38e-07,71;UBERON:0004921,4.92e-07,118;UBERON:0000486,5.30e-07,83;UBERON:0005256,5.90e-07,122;UBERON:0003077,6.16e-07,72;UBERON:0007285,6.16e-07,72;UBERON:0003103,7.68e-07,68;UBERON:0007524,8.63e-07,73;UBERON:0001737,8.65e-07,9;UBERON:0001048,9.11e-07,160 | |||
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| ||
|short_description=p1@CYC1 | |short_description=p1@CYC1 | ||
}} | }} |
Latest revision as of 00:48, 17 September 2015
Short description: | p1@CYC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYC1_5end |
Coexpression cluster: | C2145_Mesenchymal_Alveolar_Renal_Placental_nonsmall_Bronchial_left |
Association with transcript: | 0bp_to_NM_001916, uc003zaz.3_5end |
EntrezGene: | CYC1 |
HGNC: | 2579 |
UniProt: | P08574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.11e-18 | 253 |
embryonic cell | 2.69e-11 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.72e-11 | 199 |
segment of respiratory tract | 2.83e-10 | 47 |
respiratory primordium | 2.80e-09 | 38 |
endoderm of foregut | 2.80e-09 | 38 |
foregut | 3.93e-09 | 87 |
epithelial tube | 7.40e-09 | 117 |
epithelial vesicle | 1.17e-08 | 78 |
unilaminar epithelium | 1.44e-08 | 148 |
trunk region element | 1.75e-08 | 101 |
respiratory tract | 7.28e-08 | 54 |
mesenchyme | 1.51e-07 | 160 |
entire embryonic mesenchyme | 1.51e-07 | 160 |
somite | 4.38e-07 | 71 |
presomitic mesoderm | 4.38e-07 | 71 |
presumptive segmental plate | 4.38e-07 | 71 |
dermomyotome | 4.38e-07 | 71 |
trunk paraxial mesoderm | 4.38e-07 | 71 |
subdivision of digestive tract | 4.92e-07 | 118 |
multilaminar epithelium | 5.30e-07 | 83 |
trunk mesenchyme | 5.90e-07 | 122 |
paraxial mesoderm | 6.16e-07 | 72 |
presumptive paraxial mesoderm | 6.16e-07 | 72 |
compound organ | 7.68e-07 | 68 |
dense mesenchyme tissue | 8.63e-07 | 73 |
larynx | 8.65e-07 | 9 |
primordium | 9.11e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.16e-16 | 239 |
cancer | 1.43e-16 | 235 |
cell type cancer | 2.97e-12 | 143 |
carcinoma | 7.89e-12 | 106 |
organ system cancer | 4.73e-08 | 137 |