FFCP PHASE1:Hg19::chr7:24324936..24324947,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4852 | |EntrezGene=4852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7955 | |HGNC=7955 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_AB590306,DQ893335,DQ896651_5end | |association_with_transcript=76bp_to_AB590306,DQ893335,DQ896651_5end | ||
|cluster_id=chr7:24324936..24324947,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_NPY_5end | |description=CAGE_peak_3_at_NPY_5end | ||
|id=chr7:24324936..24324947,+ | |id=chr7:24324936..24324947,+ | ||
|ontology_enrichment_celltype=CL:0000047!9.31e-11!8 | |ontology_enrichment_celltype=CL:0000047!9.31e-11!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.54e-29;2!CL:0000540;1.65e-10;6!CL:0000404;1.65e-10;6!CL:0002319;1.05e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.49e-28,8;CL:0000540,1.81e-10,6;CL:0000031,1.81e-10,6;CL:0000404,1.81e-10,6;CL:0002319,1.10e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.92e-15;1!CL:0000031;1.65e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.21e-47!34;UBERON:0003528!3.21e-47!34;UBERON:0001869!2.56e-46!32;UBERON:0002791!9.07e-45!33;UBERON:0001893!2.62e-43!34;UBERON:0002780!3.82e-42!41;UBERON:0001890!3.82e-42!41;UBERON:0006240!3.82e-42!41;UBERON:0003080!5.28e-41!42;UBERON:0001017!4.97e-39!82;UBERON:0005743!7.85e-37!86;UBERON:0002619!7.97e-37!22;UBERON:0001049!1.35e-36!57;UBERON:0005068!1.35e-36!57;UBERON:0006241!1.35e-36!57;UBERON:0007135!1.35e-36!57;UBERON:0001950!4.78e-36!20;UBERON:0000956!5.80e-36!25;UBERON:0000203!5.80e-36!25;UBERON:0000073!1.50e-32!94;UBERON:0001016!1.50e-32!94;UBERON:0002616!2.62e-32!59;UBERON:0003056!1.32e-28!61;UBERON:0000955!1.73e-28!69;UBERON:0006238!1.73e-28!69;UBERON:0002346!4.96e-28!90;UBERON:0003075!1.19e-25!86;UBERON:0007284!1.19e-25!86;UBERON:0007023!1.18e-21!115;UBERON:0001871!7.25e-20!7;UBERON:0000924!2.12e-18!173;UBERON:0006601!2.12e-18!173;UBERON:0002420!2.31e-17!9;UBERON:0007245!2.31e-17!9;UBERON:0010009!2.31e-17!9;UBERON:0010011!2.31e-17!9;UBERON:0000454!2.31e-17!9;UBERON:0000153!8.54e-17!129;UBERON:0007811!8.54e-17!129;UBERON:0004121!1.21e-16!169;UBERON:0000033!2.01e-15!123;UBERON:0000369!2.38e-13!4;UBERON:0002435!2.38e-13!4;UBERON:0000204!2.38e-13!4;UBERON:0010082!2.38e-13!4;UBERON:0002308!1.66e-12!9;UBERON:0000125!1.66e-12!9;UBERON:0009663!1.07e-11!7;UBERON:0005383!6.55e-11!3;UBERON:0005382!6.55e-11!3;UBERON:0002021!1.21e-10!5;UBERON:0000349!1.91e-10!5;UBERON:0002771!1.92e-10!3;UBERON:0000200!7.62e-09!6;UBERON:0001876!7.82e-08!2;UBERON:0001873!9.24e-08!2;UBERON:0010122!9.24e-08!2;UBERON:0000025!2.15e-07!194;UBERON:0003127!3.72e-07!2;UBERON:0000064!6.47e-07!219 | |ontology_enrichment_uberon=UBERON:0002020!3.21e-47!34;UBERON:0003528!3.21e-47!34;UBERON:0001869!2.56e-46!32;UBERON:0002791!9.07e-45!33;UBERON:0001893!2.62e-43!34;UBERON:0002780!3.82e-42!41;UBERON:0001890!3.82e-42!41;UBERON:0006240!3.82e-42!41;UBERON:0003080!5.28e-41!42;UBERON:0001017!4.97e-39!82;UBERON:0005743!7.85e-37!86;UBERON:0002619!7.97e-37!22;UBERON:0001049!1.35e-36!57;UBERON:0005068!1.35e-36!57;UBERON:0006241!1.35e-36!57;UBERON:0007135!1.35e-36!57;UBERON:0001950!4.78e-36!20;UBERON:0000956!5.80e-36!25;UBERON:0000203!5.80e-36!25;UBERON:0000073!1.50e-32!94;UBERON:0001016!1.50e-32!94;UBERON:0002616!2.62e-32!59;UBERON:0003056!1.32e-28!61;UBERON:0000955!1.73e-28!69;UBERON:0006238!1.73e-28!69;UBERON:0002346!4.96e-28!90;UBERON:0003075!1.19e-25!86;UBERON:0007284!1.19e-25!86;UBERON:0007023!1.18e-21!115;UBERON:0001871!7.25e-20!7;UBERON:0000924!2.12e-18!173;UBERON:0006601!2.12e-18!173;UBERON:0002420!2.31e-17!9;UBERON:0007245!2.31e-17!9;UBERON:0010009!2.31e-17!9;UBERON:0010011!2.31e-17!9;UBERON:0000454!2.31e-17!9;UBERON:0000153!8.54e-17!129;UBERON:0007811!8.54e-17!129;UBERON:0004121!1.21e-16!169;UBERON:0000033!2.01e-15!123;UBERON:0000369!2.38e-13!4;UBERON:0002435!2.38e-13!4;UBERON:0000204!2.38e-13!4;UBERON:0010082!2.38e-13!4;UBERON:0002308!1.66e-12!9;UBERON:0000125!1.66e-12!9;UBERON:0009663!1.07e-11!7;UBERON:0005383!6.55e-11!3;UBERON:0005382!6.55e-11!3;UBERON:0002021!1.21e-10!5;UBERON:0000349!1.91e-10!5;UBERON:0002771!1.92e-10!3;UBERON:0000200!7.62e-09!6;UBERON:0001876!7.82e-08!2;UBERON:0001873!9.24e-08!2;UBERON:0010122!9.24e-08!2;UBERON:0000025!2.15e-07!194;UBERON:0003127!3.72e-07!2;UBERON:0000064!6.47e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001874;1.92e-15;1!UBERON:0002791;2.83e-15;32!UBERON:0001869;2.18e-14;32!UBERON:0002021;2.99e-12;5!UBERON:0003528;8.43e-12;34!UBERON:0002020;8.43e-12;34!UBERON:0001893;1.01e-11;34!UBERON:0001950;3.89e-11;20!UBERON:0002780;6.36e-11;41!UBERON:0001890;6.36e-11;41!UBERON:0002619;3.43e-10;22!UBERON:0001871;3.65e-09;6!UBERON:0000956;4.81e-09;25!UBERON:0000203;4.81e-09;25!UBERON:0009663;5.15e-09;7!UBERON:0001017;1.70e-08;75!UBERON:0002771;2.23e-08;2!UBERON:0001875;2.23e-08;2!UBERON:0006514;2.23e-08;2!UBERON:0002420;3.34e-07;9!UBERON:0000125;3.34e-07;9!UBERON:0007245;3.34e-07;9!UBERON:0002308;3.34e-07;9!UBERON:0010009;3.34e-07;9!UBERON:0010011;3.34e-07;9!UBERON:0000454;3.34e-07;9!UBERON:0000955;5.45e-07;68!UBERON:0001016;8.13e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.83e-19,81;UBERON:0001016,1.88e-17,89;UBERON:0002780,5.26e-16,41;UBERON:0001890,5.26e-16,41;UBERON:0003080,5.26e-16,41;UBERON:0006240,5.26e-16,41;UBERON:0002791,3.19e-15,32;UBERON:0001869,3.19e-15,32;UBERON:0001874,3.66e-15,1;UBERON:0003528,2.43e-14,34;UBERON:0002020,2.43e-14,34;UBERON:0001893,2.43e-14,34;UBERON:0002021,2.12e-12,5;UBERON:0000073,2.40e-12,53;UBERON:0002616,2.40e-12,53;UBERON:0001049,1.14e-11,56;UBERON:0005068,1.14e-11,56;UBERON:0006241,1.14e-11,56;UBERON:0007135,1.14e-11,56;UBERON:0001950,3.19e-11,20;UBERON:0003056,1.09e-10,61;UBERON:0002619,2.86e-10,22;UBERON:0000955,2.08e-09,68;UBERON:0006238,2.08e-09,68;UBERON:0011216,3.03e-09,223;UBERON:0001871,3.44e-09,6;UBERON:0000956,4.11e-09,25;UBERON:0000203,4.11e-09,25;UBERON:0009663,6.56e-09,7;UBERON:0004121,1.15e-08,171;UBERON:0000924,1.15e-08,171;UBERON:0006601,1.15e-08,171;UBERON:0002771,2.00e-08,2;UBERON:0001875,2.48e-08,2;UBERON:0006514,2.48e-08,2;UBERON:0003075,7.55e-08,82;UBERON:0007284,7.55e-08,82;UBERON:0002346,1.84e-07,86;UBERON:0002420,4.03e-07,9;UBERON:0000125,4.03e-07,9;UBERON:0007245,4.03e-07,9;UBERON:0002308,4.03e-07,9;UBERON:0010009,4.03e-07,9;UBERON:0010011,4.03e-07,9;UBERON:0000454,4.03e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,1.17261385734044,7.65526501983796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1713222286267,0,0,0,0,0,11.0186194186976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58634144372552,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90402606084398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0.80057074828547,0,2.1437183414724,0.0642292250964595,0,0.159633859057151,1.8460472781668,1.76450187355203,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.328863867814245,0,0,0.235479278551542,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,1.17261385734044,7.65526501983796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1713222286267,0,0,0,0,0,11.0186194186976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58634144372552,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90402606084398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0.80057074828547,0,2.1437183414724,0.0642292250964595,0,0.159633859057151,1.8460472781668,1.76450187355203,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.328863867814245,0,0,0.235479278551542,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p3@NPY | |short_description=p3@NPY | ||
}} | }} |
Latest revision as of 21:23, 17 September 2015
Short description: | p3@NPY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NPY_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 76bp_to_AB590306, DQ893335, DQ896651_5end |
EntrezGene: | NPY |
HGNC: | 7955 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.49e-28 | 8 |
neuron | 1.81e-10 | 6 |
neuroblast | 1.81e-10 | 6 |
electrically signaling cell | 1.81e-10 | 6 |
neural cell | 1.10e-08 | 25 |