FFCP PHASE1:Hg19::chr7:119914647..119914684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_AB384090_5end | |association_with_transcript=-1bp_to_AB384090_5end | ||
|cluster_id=chr7:119914647..119914684,+ | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_1_at_AB384090_5end | |description=CAGE_peak_1_at_AB384090_5end | ||
|id=chr7:119914647..119914684,+ | |id=chr7:119914647..119914684,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.47e-33!5;CL:0000242!7.88e-15!2;CL:0002553!3.55e-08!1;CL:0000167!1.11e-07!1;CL:0000164!1.11e-07!1;CL:0000502!1.11e-07!1;CL:0000172!1.11e-07!1;CL:0000173!1.11e-07!1;CL:0002351!1.11e-07!1 | |ontology_enrichment_celltype=CL:0002322!3.47e-33!5;CL:0000242!7.88e-15!2;CL:0002553!3.55e-08!1;CL:0000167!1.11e-07!1;CL:0000164!1.11e-07!1;CL:0000502!1.11e-07!1;CL:0000172!1.11e-07!1;CL:0000173!1.11e-07!1;CL:0002351!1.11e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.80e-42;5!CL:0000123;3.60e-28;2!CL:0000242;3.60e-28;2!CL:0002553;7.63e-15;1!CL:0002321;2.32e-14;15!CL:0000312;7.07e-12;5!CL:0000240;4.75e-10;6!CL:0000311;4.75e-10;6!CL:0000079;4.75e-10;6!CL:0000237;4.75e-10;6!CL:0000054;7.52e-08;2!CL:0000137;7.52e-08;2!CL:0000092;7.52e-08;2!CL:0000362;5.53e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.03e-42,5;CL:0000242,3.60e-28,2;CL:0002553,8.17e-15,1;CL:0000312,7.07e-12,5;CL:0000240,4.75e-10,6;CL:0000311,4.75e-10,6;CL:0000079,4.75e-10,6;CL:0000237,4.75e-10,6;CL:0000036,4.75e-10,6;CL:0000357,4.75e-10,6;CL:0000114,4.75e-10,6;CL:0000054,8.60e-08,2;CL:0000137,8.60e-08,2;CL:0000092,8.60e-08,2;CL:0000362,5.53e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;4.75e-10;6!CL:0000114;4.75e-10;6 | |||
|ontology_enrichment_disease=DOID:0060085!6.52e-08!1;DOID:3165!6.52e-08!1;DOID:0060121!6.52e-08!1;DOID:2438!6.52e-08!1;DOID:4418!6.52e-08!1;DOID:4430!1.11e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.11e-14;1!DOID:3165;2.11e-14;1!DOID:0060121;2.11e-14;1!DOID:2438;2.11e-14;1!DOID:4418;2.11e-14;1!DOID:200;7.52e-08;2!DOID:4305;7.52e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.75e-14,1;DOID:3165,2.75e-14,1;DOID:0060121,2.75e-14,1;DOID:2438,2.75e-14,1;DOID:4418,2.75e-14,1;DOID:200,8.60e-08,2;DOID:4305,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!5.33e-08!1;UBERON:0009842!5.33e-08!1;UBERON:0003704!5.33e-08!1;UBERON:0001171!5.33e-08!1;UBERON:0001172!5.33e-08!1;UBERON:0003112!1.35e-07!1;UBERON:0000032!1.35e-07!1;UBERON:0005253!1.35e-07!1;UBERON:0003128!1.35e-07!1;UBERON:0002241!1.35e-07!1;UBERON:0001703!1.35e-07!1;UBERON:0004761!1.35e-07!1;UBERON:0009617!1.35e-07!1;UBERON:0002902!1.87e-07!1;UBERON:0009899!1.87e-07!1;UBERON:0002336!1.99e-07!1;UBERON:0001018!1.99e-07!1;UBERON:0002473!1.99e-07!1;UBERON:0005340!1.99e-07!1;UBERON:0002316!1.99e-07!1;UBERON:0003544!1.99e-07!1;UBERON:0001020!1.99e-07!1;UBERON:0005970!1.99e-07!1;UBERON:0002437!1.99e-07!1;UBERON:0001049!2.24e-07!57;UBERON:0005068!2.24e-07!57;UBERON:0006241!2.24e-07!57;UBERON:0007135!2.24e-07!57;UBERON:0000955!3.23e-07!69;UBERON:0006238!3.23e-07!69;UBERON:0001017!3.85e-07!82;UBERON:0002616!4.37e-07!59;UBERON:0002680!6.69e-07!9;UBERON:0001895!6.69e-07!9;UBERON:0010092!6.69e-07!9;UBERON:0005743!9.88e-07!86 | |ontology_enrichment_uberon=UBERON:0001282!5.33e-08!1;UBERON:0009842!5.33e-08!1;UBERON:0003704!5.33e-08!1;UBERON:0001171!5.33e-08!1;UBERON:0001172!5.33e-08!1;UBERON:0003112!1.35e-07!1;UBERON:0000032!1.35e-07!1;UBERON:0005253!1.35e-07!1;UBERON:0003128!1.35e-07!1;UBERON:0002241!1.35e-07!1;UBERON:0001703!1.35e-07!1;UBERON:0004761!1.35e-07!1;UBERON:0009617!1.35e-07!1;UBERON:0002902!1.87e-07!1;UBERON:0009899!1.87e-07!1;UBERON:0002336!1.99e-07!1;UBERON:0001018!1.99e-07!1;UBERON:0002473!1.99e-07!1;UBERON:0005340!1.99e-07!1;UBERON:0002316!1.99e-07!1;UBERON:0003544!1.99e-07!1;UBERON:0001020!1.99e-07!1;UBERON:0005970!1.99e-07!1;UBERON:0002437!1.99e-07!1;UBERON:0001049!2.24e-07!57;UBERON:0005068!2.24e-07!57;UBERON:0006241!2.24e-07!57;UBERON:0007135!2.24e-07!57;UBERON:0000955!3.23e-07!69;UBERON:0006238!3.23e-07!69;UBERON:0001017!3.85e-07!82;UBERON:0002616!4.37e-07!59;UBERON:0002680!6.69e-07!9;UBERON:0001895!6.69e-07!9;UBERON:0010092!6.69e-07!9;UBERON:0005743!9.88e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.11e-14;1!UBERON:0009842;2.11e-14;1!UBERON:0003704;2.11e-14;1!UBERON:0001171;2.11e-14;1!UBERON:0001172;2.11e-14;1!UBERON:0000473;1.21e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.84e-14,1;UBERON:0009842,1.84e-14,1;UBERON:0003704,1.84e-14,1;UBERON:0001171,1.84e-14,1;UBERON:0001172,1.84e-14,1;UBERON:0000473,1.23e-07,8 | |||
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|short_description=p1@AB384090 | |short_description=p1@AB384090 | ||
}} | }} |
Latest revision as of 05:25, 31 July 2015
Short description: | p1@AB384090 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB384090_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -1bp_to_AB384090_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.03e-42 | 5 |
Merkel cell | 3.60e-28 | 2 |
lung fibroblast | 8.17e-15 | 1 |
keratinocyte | 7.07e-12 | 5 |
stratified squamous epithelial cell | 4.75e-10 | 6 |
keratin accumulating cell | 4.75e-10 | 6 |
stratified epithelial cell | 4.75e-10 | 6 |
keratinizing barrier epithelial cell | 4.75e-10 | 6 |
epithelial fate stem cell | 4.75e-10 | 6 |
stratified epithelial stem cell | 4.75e-10 | 6 |
surface ectodermal cell | 4.75e-10 | 6 |
bone matrix secreting cell | 8.60e-08 | 2 |
osteocyte | 8.60e-08 | 2 |
osteoclast | 8.60e-08 | 2 |
epidermal cell | 5.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.84e-14 | 1 |
acinus | 1.84e-14 | 1 |
intrahepatic bile duct | 1.84e-14 | 1 |
portal lobule | 1.84e-14 | 1 |
hepatic acinus | 1.84e-14 | 1 |
testis | 1.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.75e-14 | 1 |
skin benign neoplasm | 2.75e-14 | 1 |
integumentary system benign neoplasm | 2.75e-14 | 1 |
dermis tumor | 2.75e-14 | 1 |
cutaneous fibrous histiocytoma | 2.75e-14 | 1 |
giant cell tumor | 8.60e-08 | 2 |
bone giant cell tumor | 8.60e-08 | 2 |