FFCP PHASE1:Hg19::chr7:100425082..100425085,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2050 | |EntrezGene=2050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3395 | |HGNC=3395 | ||
|TSSclassifier=strong | |||
|UniProt=P54760 | |UniProt=P54760 | ||
|association_with_transcript=35bp_to_ENST00000358173_5end | |association_with_transcript=35bp_to_ENST00000358173_5end | ||
|cluster_id=chr7:100425082..100425085,- | |||
|description=CAGE_peak_6_at_EPHB4_5end | |description=CAGE_peak_6_at_EPHB4_5end | ||
|id=chr7:100425082..100425085,- | |id=chr7:100425082..100425085,- | ||
|ontology_enrichment_celltype=CL:0000213!8.51e-11!57;CL:0000215!8.51e-11!57;CL:0000115!1.42e-10!35;CL:0002139!2.49e-10!24;CL:0000071!1.98e-09!18;CL:0002546!1.98e-09!18;CL:0000066!5.46e-09!254;CL:0002078!6.72e-09!44;CL:0000220!6.79e-09!246;CL:0002321!8.46e-09!248;CL:0000222!7.51e-08!119;CL:0000076!5.13e-07!62 | |ontology_enrichment_celltype=CL:0000213!8.51e-11!57;CL:0000215!8.51e-11!57;CL:0000115!1.42e-10!35;CL:0002139!2.49e-10!24;CL:0000071!1.98e-09!18;CL:0002546!1.98e-09!18;CL:0000066!5.46e-09!254;CL:0002078!6.72e-09!44;CL:0000220!6.79e-09!246;CL:0002321!8.46e-09!248;CL:0000222!7.51e-08!119;CL:0000076!5.13e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002144;2.64e-19;3!CL:0002367;1.84e-13;2!CL:0000115;2.15e-13;36!CL:0000071;5.85e-12;18!CL:0002078;4.87e-11;45!CL:0000346;2.86e-09;3!CL:1000428;2.86e-09;3!CL:0002139;7.76e-09;24!CL:0000213;6.23e-07;58!CL:0000215;6.23e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.21e-19,3;CL:0000115,3.24e-19,36;CL:0002078,5.72e-15,45;CL:0002367,4.47e-13,2;CL:0000071,3.49e-12,18;CL:0002546,3.49e-12,18;CL:0000213,3.66e-11,58;CL:0000215,3.66e-11,58;CL:0000346,1.59e-09,3;CL:1000428,1.59e-09,3;CL:0002139,5.33e-09,24 | |||
|ontology_enrichment_development_v019=CL:0002546;5.85e-12;18!UBERON:0005754;1.43e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.98e-09!18;UBERON:0004638!1.98e-09!18;UBERON:0004852!1.98e-09!18;UBERON:0000481!2.09e-09!347;UBERON:0003104!4.73e-09!238;UBERON:0009142!4.73e-09!238;UBERON:0002100!7.46e-09!216;UBERON:0003914!1.56e-08!118;UBERON:0000487!1.84e-08!22;UBERON:0004119!4.89e-08!169;UBERON:0000925!4.89e-08!169;UBERON:0006595!4.89e-08!169;UBERON:0006914!6.09e-08!25;UBERON:0001007!6.59e-08!155;UBERON:0001555!6.59e-08!155;UBERON:0007026!6.59e-08!155;UBERON:0004872!6.77e-08!84;UBERON:0000477!8.09e-08!286;UBERON:0004111!2.09e-07!241;UBERON:0000119!2.51e-07!312;UBERON:0002049!3.03e-07!79;UBERON:0007798!3.03e-07!79;UBERON:0000055!3.75e-07!69;UBERON:0000490!4.73e-07!138;UBERON:0001981!4.96e-07!60;UBERON:0007500!4.96e-07!60;UBERON:0004537!4.96e-07!60;UBERON:0006965!4.96e-07!60;UBERON:0009569!8.18e-07!113;UBERON:0000483!8.47e-07!309;UBERON:0001048!9.92e-07!168 | |ontology_enrichment_uberon=UBERON:0001986!1.98e-09!18;UBERON:0004638!1.98e-09!18;UBERON:0004852!1.98e-09!18;UBERON:0000481!2.09e-09!347;UBERON:0003104!4.73e-09!238;UBERON:0009142!4.73e-09!238;UBERON:0002100!7.46e-09!216;UBERON:0003914!1.56e-08!118;UBERON:0000487!1.84e-08!22;UBERON:0004119!4.89e-08!169;UBERON:0000925!4.89e-08!169;UBERON:0006595!4.89e-08!169;UBERON:0006914!6.09e-08!25;UBERON:0001007!6.59e-08!155;UBERON:0001555!6.59e-08!155;UBERON:0007026!6.59e-08!155;UBERON:0004872!6.77e-08!84;UBERON:0000477!8.09e-08!286;UBERON:0004111!2.09e-07!241;UBERON:0000119!2.51e-07!312;UBERON:0002049!3.03e-07!79;UBERON:0007798!3.03e-07!79;UBERON:0000055!3.75e-07!69;UBERON:0000490!4.73e-07!138;UBERON:0001981!4.96e-07!60;UBERON:0007500!4.96e-07!60;UBERON:0004537!4.96e-07!60;UBERON:0006965!4.96e-07!60;UBERON:0009569!8.18e-07!113;UBERON:0000483!8.47e-07!309;UBERON:0001048!9.92e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.64e-19;3!UBERON:0001915;2.64e-19;3!UBERON:0001982;2.64e-19;3!UBERON:0005969;1.84e-13;2!UBERON:0003956;1.84e-13;2!UBERON:0004638;5.85e-12;18!UBERON:0001986;5.85e-12;18!UBERON:0004852;5.85e-12;18!UBERON:0000487;1.09e-09;22!UBERON:0000412;2.86e-09;3!UBERON:0001992;2.86e-09;3!UBERON:0006914;1.84e-08;25!UBERON:0000490;5.95e-08;33!UBERON:0000970;1.30e-07;20!UBERON:0006834;1.43e-07;1!UBERON:0000998;1.43e-07;1!UBERON:0002135;1.43e-07;1!UBERON:0006868;1.43e-07;1!UBERON:0001801;2.69e-07;14!UBERON:0002104;3.07e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.21e-19,3;UBERON:0001915,1.21e-19,3;UBERON:0001982,1.21e-19,3;UBERON:0005969,4.47e-13,2;UBERON:0003956,4.47e-13,2;UBERON:0004638,3.49e-12,18;UBERON:0001986,3.49e-12,18;UBERON:0004852,3.49e-12,18;UBERON:0000487,7.21e-10,22;UBERON:0000412,1.59e-09,3;UBERON:0001992,1.59e-09,3;UBERON:0006914,1.29e-08,25;UBERON:0006834,1.22e-07,1;UBERON:0000998,1.48e-07,1;UBERON:0006868,1.48e-07,1;UBERON:0002135,2.17e-07,1;UBERON:0001801,4.47e-07,14;UBERON:0000970,5.00e-07,21;UBERON:0002104,5.00e-07,21;UBERON:0000080,6.18e-07,9;UBERON:0002120,6.18e-07,9;UBERON:0004875,6.18e-07,9;UBERON:0005721,6.18e-07,9;UBERON:0005754,6.18e-07,9;UBERON:0007297,6.18e-07,9 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0.263766978228454,0.37129905888014,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0.838998872419812,1.10047216776027,0.417989933073621,0.258416759169329,0.35576626268671,0,1.20848795132744,1.52054421143703,1.46437234528902,0.735326160691737,1.62028389576352,0.714397826272638,0.898117490504679,0.450445921933289,1.53316637465883,0,0.916008719652036,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0.323745888736263,0.280901613404497,0,0.245668634623536,0.206651562351531,2.37600571456411,0.247266929278557,0,0,0,0,0.554128230968366,1.31693286264251,0.30648779579902,0.150238058906597,0.226864366320042,0,0,0,0.900273288253207,0.103052529238439,0.772921620136887,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0,0,0,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,2.95262181849859,0,0.4115740113314,1.47008711385542,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0.301586917234893,0,0.651616610620649,1.03993478527958,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.447792613514241,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0.672786506072164,0.43596006883328,0.1466765716419,0.258543431515556,3.57656445851882,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,4.5481500811197,3.10419213877515,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0.909382714338778,0,0.907170879989041,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.120859449591622,0.40101294060657,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,1.46139224653261,0,0,0.510281115829547,0.431831832204279,3.08454505380579,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.515205058238611,0.183138929636687,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0.426133137080504,0.267096106940212,0,0.384380134730212,0.127612712494584,0,0,0.62962469366128,0.6970372701606,0.924100740528266,0,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0.563391205064483,0,0,0,0,0.211107635297664,0,1.13841952129715,1.04980416073495,0.192444225451024,0,1.08890984861323,0.282431402330337,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.568272293612826,0.47748896947538,0,0.614321404198464,0,0.140669416410513,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0.358042349351218,0,0.295930216910801,0,0,0,0,0,1.04171104434093,0.174919999992391,0,0.341380344856499,0,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0.692552326534174,0.341826167541004,0.46112780877612,0.179515288819544,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0.451191321234361,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.353830258013357,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.391329237864179,0.242780379534093,0.394584402849391,1.20990716048664,0,0.252746318513952,0.150323419414493,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0,0.17472666824203,0,0.290268993867255,0.0730893170861856,0.0821154570532092,0.290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| ||
|short_description=p6@EPHB4 | |short_description=p6@EPHB4 | ||
}} | }} |
Latest revision as of 14:28, 24 September 2015
Short description: | p6@EPHB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EPHB4_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000358173_5end |
EntrezGene: | EPHB4 |
HGNC: | 3395 |
UniProt: | P54760 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.21e-19 | 3 |
endothelial cell | 3.24e-19 | 36 |
meso-epithelial cell | 5.72e-15 | 45 |
trabecular meshwork cell | 4.47e-13 | 2 |
blood vessel endothelial cell | 3.49e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.49e-12 | 18 |
lining cell | 3.66e-11 | 58 |
barrier cell | 3.66e-11 | 58 |
hair follicle dermal papilla cell | 1.59e-09 | 3 |
stem cell of epidermis | 1.59e-09 | 3 |
endothelial cell of vascular tree | 5.33e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.21e-19 | 3 |
endothelium of capillary | 1.21e-19 | 3 |
capillary | 1.21e-19 | 3 |
reticulum trabeculare | 4.47e-13 | 2 |
aqueous drainage system | 4.47e-13 | 2 |
blood vessel endothelium | 3.49e-12 | 18 |
endothelium | 3.49e-12 | 18 |
cardiovascular system endothelium | 3.49e-12 | 18 |
simple squamous epithelium | 7.21e-10 | 22 |
dermal papilla | 1.59e-09 | 3 |
papillary layer of dermis | 1.59e-09 | 3 |
squamous epithelium | 1.29e-08 | 25 |
uterus or analog | 1.22e-07 | 1 |
seminal vesicle | 1.48e-07 | 1 |
seminal fluid secreting gland | 1.48e-07 | 1 |
mitral valve | 2.17e-07 | 1 |
anterior segment of eyeball | 4.47e-07 | 14 |
eye | 5.00e-07 | 21 |
visual system | 5.00e-07 | 21 |
mesonephros | 6.18e-07 | 9 |
pronephros | 6.18e-07 | 9 |
nephrogenic cord | 6.18e-07 | 9 |
pronephric mesoderm | 6.18e-07 | 9 |
rostral part of nephrogenic cord | 6.18e-07 | 9 |
presumptive pronephric mesoderm | 6.18e-07 | 9 |