FFCP PHASE1:Hg19::chr6:64282377..64282392,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7803 | |EntrezGene=7803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9634 | |HGNC=9634 | ||
|TSSclassifier=strong | |||
|UniProt=Q93096 | |UniProt=Q93096 | ||
|association_with_transcript=-1bp_to_ENST00000370651_5end | |association_with_transcript=-1bp_to_ENST00000370651_5end | ||
|cluster_id=chr6:64282377..64282392,+ | |||
|coexpression_cluster_id=C4622 | |||
|description=CAGE_peak_2_at_PTP4A1_5end | |description=CAGE_peak_2_at_PTP4A1_5end | ||
|id=chr6:64282377..64282392,+ | |id=chr6:64282377..64282392,+ | ||
|ontology_enrichment_celltype=CL:0000223!2.18e-07!59 | |ontology_enrichment_celltype=CL:0000223!2.18e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.26e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.13e-14!169;UBERON:0000925!6.13e-14!169;UBERON:0006595!6.13e-14!169;UBERON:0000922!4.24e-13!612;UBERON:0002050!3.36e-12!605;UBERON:0005423!3.36e-12!605;UBERON:0000923!3.43e-12!604;UBERON:0005291!3.43e-12!604;UBERON:0006598!3.43e-12!604;UBERON:0002532!3.43e-12!604;UBERON:0001007!1.45e-11!155;UBERON:0001555!1.45e-11!155;UBERON:0007026!1.45e-11!155;UBERON:0004921!9.37e-11!129;UBERON:0004185!9.37e-11!129;UBERON:0003104!2.02e-10!238;UBERON:0009142!2.02e-10!238;UBERON:0000077!1.01e-09!130;UBERON:0000468!1.89e-09!659;UBERON:0001004!3.45e-09!72;UBERON:0000481!4.11e-09!347;UBERON:0000062!2.17e-08!511;UBERON:0008947!3.32e-08!38;UBERON:0003258!3.32e-08!38;UBERON:0002365!5.58e-08!31;UBERON:0002330!5.58e-08!31;UBERON:0001041!5.67e-08!98;UBERON:0000065!5.92e-08!53;UBERON:0002100!6.03e-08!216;UBERON:0001737!1.94e-07!9;UBERON:0000467!1.97e-07!625;UBERON:0000480!2.45e-07!626;UBERON:0002530!8.95e-07!59;UBERON:0000475!9.91e-07!365 | |ontology_enrichment_uberon=UBERON:0004119!6.13e-14!169;UBERON:0000925!6.13e-14!169;UBERON:0006595!6.13e-14!169;UBERON:0000922!4.24e-13!612;UBERON:0002050!3.36e-12!605;UBERON:0005423!3.36e-12!605;UBERON:0000923!3.43e-12!604;UBERON:0005291!3.43e-12!604;UBERON:0006598!3.43e-12!604;UBERON:0002532!3.43e-12!604;UBERON:0001007!1.45e-11!155;UBERON:0001555!1.45e-11!155;UBERON:0007026!1.45e-11!155;UBERON:0004921!9.37e-11!129;UBERON:0004185!9.37e-11!129;UBERON:0003104!2.02e-10!238;UBERON:0009142!2.02e-10!238;UBERON:0000077!1.01e-09!130;UBERON:0000468!1.89e-09!659;UBERON:0001004!3.45e-09!72;UBERON:0000481!4.11e-09!347;UBERON:0000062!2.17e-08!511;UBERON:0008947!3.32e-08!38;UBERON:0003258!3.32e-08!38;UBERON:0002365!5.58e-08!31;UBERON:0002330!5.58e-08!31;UBERON:0001041!5.67e-08!98;UBERON:0000065!5.92e-08!53;UBERON:0002100!6.03e-08!216;UBERON:0001737!1.94e-07!9;UBERON:0000467!1.97e-07!625;UBERON:0000480!2.45e-07!626;UBERON:0002530!8.95e-07!59;UBERON:0000475!9.91e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.43e-08;44!UBERON:0002365;1.14e-07;31!UBERON:0002330;1.14e-07;31!UBERON:0001737;1.93e-07;9!UBERON:0001557;1.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.38e-14,160;UBERON:0000925,1.38e-14,160;UBERON:0006595,1.38e-14,160;UBERON:0001007,6.47e-12,145;UBERON:0001555,6.47e-12,145;UBERON:0007026,6.47e-12,145;UBERON:0004921,2.28e-11,118;UBERON:0000922,3.93e-11,592;UBERON:0005423,1.01e-10,581;UBERON:0001004,3.18e-09,74;UBERON:0002050,4.01e-09,564;UBERON:0000923,7.53e-09,560;UBERON:0010316,7.53e-09,560;UBERON:0005291,7.53e-09,560;UBERON:0006598,7.53e-09,560;UBERON:0010317,7.53e-09,560;UBERON:0002532,7.53e-09,560;UBERON:0001041,1.35e-08,87;UBERON:0011216,2.29e-08,223;UBERON:0000065,3.28e-08,54;UBERON:0008947,3.32e-08,38;UBERON:0003258,3.32e-08,38;UBERON:0002365,5.58e-08,31;UBERON:0002330,5.58e-08,31;UBERON:0001737,1.94e-07,9;UBERON:0002100,3.37e-07,199;UBERON:0002530,8.95e-07,59 | |||
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36 | ||
|short_description=p2@PTP4A1 | |short_description=p2@PTP4A1 | ||
}} | }} |
Latest revision as of 12:23, 19 September 2015
Short description: | p2@PTP4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTP4A1_5end |
Coexpression cluster: | C4622_cervical_liver_glassy_Prostate_Hep2_Small_epitheloid |
Association with transcript: | -1bp_to_ENST00000370651_5end |
EntrezGene: | PTP4A1 |
HGNC: | 9634 |
UniProt: | Q93096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.26e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.38e-14 | 160 |
endoderm | 1.38e-14 | 160 |
presumptive endoderm | 1.38e-14 | 160 |
digestive system | 6.47e-12 | 145 |
digestive tract | 6.47e-12 | 145 |
primitive gut | 6.47e-12 | 145 |
subdivision of digestive tract | 2.28e-11 | 118 |
embryo | 3.93e-11 | 592 |
developing anatomical structure | 1.01e-10 | 581 |
respiratory system | 3.18e-09 | 74 |
embryonic structure | 4.01e-09 | 564 |
germ layer | 7.53e-09 | 560 |
germ layer / neural crest | 7.53e-09 | 560 |
embryonic tissue | 7.53e-09 | 560 |
presumptive structure | 7.53e-09 | 560 |
germ layer / neural crest derived structure | 7.53e-09 | 560 |
epiblast (generic) | 7.53e-09 | 560 |
foregut | 1.35e-08 | 87 |
organ system subdivision | 2.29e-08 | 223 |
respiratory tract | 3.28e-08 | 54 |
respiratory primordium | 3.32e-08 | 38 |
endoderm of foregut | 3.32e-08 | 38 |
exocrine gland | 5.58e-08 | 31 |
exocrine system | 5.58e-08 | 31 |
larynx | 1.94e-07 | 9 |
trunk | 3.37e-07 | 199 |
gland | 8.95e-07 | 59 |