FFCP PHASE1:Hg19::chr6:56485129..56485140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56485129..56485140,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56485129..56485140,- | |description=CAGE_peak_at_chr6:56485129..56485140,- | ||
|id=chr6:56485129..56485140,- | |id=chr6:56485129..56485140,- | ||
|ontology_enrichment_celltype=CL:0002076!3.74e-14!43;CL:0000066!7.58e-14!254;CL:0000223!1.56e-13!59;CL:0002251!1.54e-10!21;CL:0000076!5.55e-08!62 | |ontology_enrichment_celltype=CL:0002076!3.74e-14!43;CL:0000066!7.58e-14!254;CL:0000223!1.56e-13!59;CL:0002251!1.54e-10!21;CL:0000076!5.55e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.25e-27;42!CL:0002251;1.02e-19;20!CL:0002623;3.29e-16;3!CL:0002231;6.49e-16;3!CL:0002336;2.60e-12;1!CL:0002261;2.60e-12;1!CL:0002170;2.60e-12;1!CL:0002327;4.08e-12;4!CL:0000622;4.25e-10;5!CL:0000154;1.47e-08;6!CL:0002368;3.00e-08;13!CL:0000240;3.02e-08;6!CL:0000311;3.02e-08;6!CL:0000079;3.02e-08;6!CL:0000237;3.02e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.21e-30,42;CL:0000223,5.66e-26,58;CL:0002251,9.08e-20,20;CL:0002623,3.18e-16,3;CL:0002231,6.74e-16,3;CL:0002336,1.75e-12,1;CL:0002261,1.75e-12,1;CL:0002170,1.75e-12,1;CL:0002327,5.40e-12,4;CL:0000066,5.57e-12,253;CL:0000622,4.16e-10,5;CL:0000154,1.44e-08,6;CL:0002368,2.36e-08,13;CL:0000240,2.61e-08,6;CL:0000311,2.61e-08,6;CL:0000079,2.61e-08,6;CL:0000237,2.61e-08,6;CL:0000036,2.61e-08,6;CL:0000357,2.61e-08,6;CL:0000114,2.61e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000223;3.69e-12;58!CL:0000357;3.02e-08;6!CL:0000114;3.02e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!3.55e-15!14;DOID:0050687!1.34e-09!143;DOID:305!3.32e-09!106;DOID:162!1.06e-07!235;DOID:14566!3.10e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!9.35e-09!5;UBERON:0000161!9.39e-09!35;UBERON:0001004!1.27e-08!72;UBERON:0003343!3.19e-07!4;UBERON:0004785!3.19e-07!4;UBERON:0005153!4.87e-07!37;UBERON:0003937!9.84e-07!12;UBERON:0005399!9.84e-07!12 | |ontology_enrichment_uberon=UBERON:0003729!9.35e-09!5;UBERON:0000161!9.39e-09!35;UBERON:0001004!1.27e-08!72;UBERON:0003343!3.19e-07!4;UBERON:0004785!3.19e-07!4;UBERON:0005153!4.87e-07!37;UBERON:0003937!9.84e-07!12;UBERON:0005399!9.84e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;4.08e-12;4!UBERON:0000165;6.12e-10;28!UBERON:0000161;9.59e-10;19!UBERON:0000166;9.59e-10;19!UBERON:0002365;5.83e-09;31!UBERON:0002330;5.83e-09;31!UBERON:0001044;1.47e-08;6!UBERON:0003293;1.47e-08;6!UBERON:0003294;1.47e-08;6!UBERON:0010047;1.47e-08;6!UBERON:0003408;1.47e-08;6!UBERON:0000167;1.47e-08;6!UBERON:0003729;3.00e-08;13!UBERON:0006562;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,5.95e-13,8;UBERON:0001911,5.40e-12,4;UBERON:0005333,5.40e-12,4;UBERON:0008425,5.40e-12,4;UBERON:0005311,5.40e-12,4;UBERON:0000161,6.49e-11,36;UBERON:0004119,7.99e-10,160;UBERON:0000925,7.99e-10,160;UBERON:0006595,7.99e-10,160;UBERON:0000165,1.17e-09,29;UBERON:0000930,1.17e-09,29;UBERON:0002365,6.49e-09,31;UBERON:0002330,6.49e-09,31;UBERON:0002530,1.28e-08,59;UBERON:0001044,1.44e-08,6;UBERON:0003293,1.44e-08,6;UBERON:0003294,1.44e-08,6;UBERON:0010047,1.44e-08,6;UBERON:0000167,1.44e-08,6;UBERON:0000166,1.77e-08,22;UBERON:0003729,2.49e-08,13;UBERON:0001444,7.26e-08,49;UBERON:0000033,7.91e-07,56;UBERON:0001004,8.18e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0.548751427043128,0,1.20634766893957,1.38882667737794,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.503946384596579,0.425325291727159,2.05984602216551,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,1.20303882181971,3.13075362382048,0,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,1.65284915360978,1.72971060628596,0.638063562472921,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0.614321404198464,0,0.281338832821026,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0.341380344856499,0.254253650292766,0,0,0,0.520874984799877,0,0.241192877250816,0,0.110579259931225,0,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0.0870592065804026,0,0.343972064943233,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0.248505071130865,0.707082103850386,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0.276697269872462,0.249960815924213,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0,0,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.478901577171454,0,0,0,0.322951291263702,0,0.588886311006154,0.353909170043221,2.75142897782519,0.577628330751691,0,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,1.14986184875636,0.535701835878287,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0.354581522651905,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0.173858272302579,0,2.69381013411948,5.4629912670064,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.2498775702396,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0.548751427043128,0,1.20634766893957,1.38882667737794,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.503946384596579,0.425325291727159,2.05984602216551,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,1.20303882181971,3.13075362382048,0,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,1.65284915360978,1.72971060628596,0.638063562472921,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0.614321404198464,0,0.281338832821026,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0.341380344856499,0.254253650292766,0,0,0,0.520874984799877,0,0.241192877250816,0,0.110579259931225,0,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0.0870592065804026,0,0.343972064943233,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0.248505071130865,0.707082103850386,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0.276697269872462,0.249960815924213,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0,0,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.478901577171454,0,0,0,0.322951291263702,0,0.588886311006154,0.353909170043221,2.75142897782519,0.577628330751691,0,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,1.14986184875636,0.535701835878287,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0.354581522651905,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0.173858272302579,0,2.69381013411948,5.4629912670064,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.2498775702396,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:56485129..56485140,- | |short_description=p@chr6:56485129..56485140,- | ||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56485129..56485140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56485129..56485140, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.21e-30 | 42 |
endodermal cell | 5.66e-26 | 58 |
epithelial cell of alimentary canal | 9.08e-20 | 20 |
acinar cell of salivary gland | 3.18e-16 | 3 |
epithelial cell of prostate | 6.74e-16 | 3 |
buccal mucosa cell | 1.75e-12 | 1 |
endothelial cell of viscerocranial mucosa | 1.75e-12 | 1 |
keratinized cell of the oral mucosa | 1.75e-12 | 1 |
mammary gland epithelial cell | 5.40e-12 | 4 |
epithelial cell | 5.57e-12 | 253 |
acinar cell | 4.16e-10 | 5 |
protein secreting cell | 1.44e-08 | 6 |
respiratory epithelial cell | 2.36e-08 | 13 |
stratified squamous epithelial cell | 2.61e-08 | 6 |
keratin accumulating cell | 2.61e-08 | 6 |
stratified epithelial cell | 2.61e-08 | 6 |
keratinizing barrier epithelial cell | 2.61e-08 | 6 |
epithelial fate stem cell | 2.61e-08 | 6 |
stratified epithelial stem cell | 2.61e-08 | 6 |
surface ectodermal cell | 2.61e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 5.95e-13 | 8 |
mammary gland | 5.40e-12 | 4 |
mammary bud | 5.40e-12 | 4 |
mammary ridge | 5.40e-12 | 4 |
mammary placode | 5.40e-12 | 4 |
orifice | 6.49e-11 | 36 |
endoderm-derived structure | 7.99e-10 | 160 |
endoderm | 7.99e-10 | 160 |
presumptive endoderm | 7.99e-10 | 160 |
mouth | 1.17e-09 | 29 |
stomodeum | 1.17e-09 | 29 |
exocrine gland | 6.49e-09 | 31 |
exocrine system | 6.49e-09 | 31 |
gland | 1.28e-08 | 59 |
saliva-secreting gland | 1.44e-08 | 6 |
gland of oral region | 1.44e-08 | 6 |
gland of foregut | 1.44e-08 | 6 |
oral gland | 1.44e-08 | 6 |
oral cavity | 1.44e-08 | 6 |
oral opening | 1.77e-08 | 22 |
mouth mucosa | 2.49e-08 | 13 |
subdivision of head | 7.26e-08 | 49 |
head | 7.91e-07 | 56 |
respiratory system | 8.18e-07 | 74 |