FFCP PHASE1:Hg19::chr6:51952418..51952428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5314 | |EntrezGene=5314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9016 | |HGNC=9016 | ||
|TSSclassifier=strong | |||
|UniProt=P08F94,A8MVM9 | |UniProt=P08F94,A8MVM9 | ||
|association_with_transcript=0bp_to_ENST00000371117,ENST00000393616,NM_138694,NM_170724,uc003pah.1,uc003pai.2_5end | |association_with_transcript=0bp_to_ENST00000371117,ENST00000393616,NM_138694,NM_170724,uc003pah.1,uc003pai.2_5end | ||
|cluster_id=chr6:51952418..51952428,- | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_4_at_PKHD1_5end | |description=CAGE_peak_4_at_PKHD1_5end | ||
|id=chr6:51952418..51952428,- | |id=chr6:51952418..51952428,- | ||
|ontology_enrichment_celltype=CL:1000497!1.38e-08!18;CL:0002518!1.38e-08!18;CL:0000313!5.58e-08!1;CL:0002563!3.49e-07!4 | |ontology_enrichment_celltype=CL:1000497!1.38e-08!18;CL:0002518!1.38e-08!18;CL:0000313!5.58e-08!1;CL:0002563!3.49e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000313;4.10e-23;1!CL:0000159;2.90e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.62e-23,1;CL:0000159,2.32e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.28e-20;10!UBERON:0007687;1.28e-20;10!UBERON:0003104;2.60e-07;31 | |||
|ontology_enrichment_disease=DOID:2152!5.58e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;4.10e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.62e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!4.86e-14!27;UBERON:0003918!4.86e-14!27;UBERON:0005095!4.86e-14!27;UBERON:0007687!4.86e-14!27;UBERON:0005172!5.95e-12!55;UBERON:0005173!5.95e-12!55;UBERON:0000489!1.16e-11!32;UBERON:0002417!1.41e-10!61;UBERON:0000916!1.41e-10!61;UBERON:0006554!3.07e-10!44;UBERON:0001008!5.58e-10!45;UBERON:0006947!1.53e-09!3;UBERON:0004054!1.53e-09!3;UBERON:0005177!8.73e-09!107;UBERON:0000058!3.84e-08!26;UBERON:0004911!5.58e-08!1;UBERON:0001000!8.28e-08!1;UBERON:0005352!8.28e-08!1;UBERON:0001301!9.44e-08!1;UBERON:0005904!2.32e-07!4;UBERON:0006834!2.63e-07!1;UBERON:0001242!3.49e-07!4;UBERON:0001262!3.49e-07!4;UBERON:0004786!3.49e-07!4;UBERON:0004808!3.49e-07!4;UBERON:0001277!3.49e-07!4;UBERON:0009569!6.73e-07!113 | |ontology_enrichment_uberon=UBERON:0002113!4.86e-14!27;UBERON:0003918!4.86e-14!27;UBERON:0005095!4.86e-14!27;UBERON:0007687!4.86e-14!27;UBERON:0005172!5.95e-12!55;UBERON:0005173!5.95e-12!55;UBERON:0000489!1.16e-11!32;UBERON:0002417!1.41e-10!61;UBERON:0000916!1.41e-10!61;UBERON:0006554!3.07e-10!44;UBERON:0001008!5.58e-10!45;UBERON:0006947!1.53e-09!3;UBERON:0004054!1.53e-09!3;UBERON:0005177!8.73e-09!107;UBERON:0000058!3.84e-08!26;UBERON:0004911!5.58e-08!1;UBERON:0001000!8.28e-08!1;UBERON:0005352!8.28e-08!1;UBERON:0001301!9.44e-08!1;UBERON:0005904!2.32e-07!4;UBERON:0006834!2.63e-07!1;UBERON:0001242!3.49e-07!4;UBERON:0001262!3.49e-07!4;UBERON:0004786!3.49e-07!4;UBERON:0004808!3.49e-07!4;UBERON:0001277!3.49e-07!4;UBERON:0009569!6.73e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;4.10e-23;1!UBERON:0004909;2.90e-12;2!UBERON:0002113;5.42e-09;24!UBERON:0011143;5.42e-09;24!UBERON:0002114;1.30e-08;2!UBERON:0000489;1.52e-07;29!UBERON:0006554;2.60e-07;30!UBERON:0001008;2.60e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.62e-23,1;UBERON:0004909,2.32e-12,2;UBERON:0002114,1.30e-08,2;UBERON:0002113,2.46e-08,26;UBERON:0003918,2.46e-08,26;UBERON:0011143,2.46e-08,26;UBERON:0005095,2.46e-08,26;UBERON:0007687,2.46e-08,26;UBERON:0000489,4.39e-07,31;UBERON:0005172,6.51e-07,54;UBERON:0005173,6.51e-07,54 | |||
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|short_description=p4@PKHD1 | |short_description=p4@PKHD1 | ||
}} | }} |
Latest revision as of 05:44, 19 September 2015
Short description: | p4@PKHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PKHD1_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 0bp_to_ENST00000371117, ENST00000393616, NM_138694, NM_170724, uc003pah.1, uc003pai.2_5end |
EntrezGene: | PKHD1 |
HGNC: | 9016 |
UniProt: | P08F94A8MVM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.62e-23 | 1 |
seromucus secreting cell | 2.32e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.62e-23 | 1 |
epithelium of gonad | 2.32e-12 | 2 |
duodenum | 1.30e-08 | 2 |
kidney | 2.46e-08 | 26 |
kidney mesenchyme | 2.46e-08 | 26 |
upper urinary tract | 2.46e-08 | 26 |
kidney rudiment | 2.46e-08 | 26 |
kidney field | 2.46e-08 | 26 |
cavitated compound organ | 4.39e-07 | 31 |
abdomen element | 6.51e-07 | 54 |
abdominal segment element | 6.51e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.62e-23 | 1 |