FFCP PHASE1:Hg19::chr6:25781321..25781354,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:25781321..25781354,+ | |||
|coexpression_cluster_id=C1603 | |||
|description=CAGE_peak_at_chr6:25781321..25781354,+ | |description=CAGE_peak_at_chr6:25781321..25781354,+ | ||
|id=chr6:25781321..25781354,+ | |id=chr6:25781321..25781354,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.20e-17!12;CL:0000417!1.20e-17!12;CL:0000668!1.20e-17!12;CL:0000414!1.20e-17!12;CL:0000412!1.20e-17!12;CL:0000182!1.20e-17!12 | |ontology_enrichment_celltype=CL:0000181!1.20e-17!12;CL:0000417!1.20e-17!12;CL:0000668!1.20e-17!12;CL:0000414!1.20e-17!12;CL:0000412!1.20e-17!12;CL:0000182!1.20e-17!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.44e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.63e-17,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.82e-18!27;UBERON:0009497!9.44e-16!25;UBERON:0000015!9.44e-16!25;UBERON:0002423!9.44e-16!25;UBERON:0006235!9.44e-16!25;UBERON:0004161!9.44e-16!25;UBERON:0002107!1.48e-15!19;UBERON:0006925!1.48e-15!19;UBERON:0008836!1.48e-15!19;UBERON:0002108!5.20e-14!14;UBERON:0005409!5.49e-14!35;UBERON:0008835!2.25e-13!22;UBERON:0003894!2.25e-13!22;UBERON:0009854!8.99e-13!23;UBERON:0007499!1.03e-11!25;UBERON:0005057!3.03e-11!26;UBERON:0009856!3.03e-11!26;UBERON:0004921!3.00e-10!129;UBERON:0004185!3.00e-10!129;UBERON:0001007!1.71e-09!155;UBERON:0001555!1.71e-09!155;UBERON:0007026!1.71e-09!155;UBERON:0002365!2.36e-09!31;UBERON:0002330!2.36e-09!31;UBERON:0001155!5.09e-09!9;UBERON:0005172!1.10e-08!55;UBERON:0005173!1.10e-08!55;UBERON:0004119!1.71e-08!169;UBERON:0000925!1.71e-08!169;UBERON:0006595!1.71e-08!169;UBERON:0000949!1.90e-08!45;UBERON:0002368!3.15e-08!35;UBERON:0002417!9.98e-08!61;UBERON:0000916!9.98e-08!61;UBERON:0000059!1.83e-07!11;UBERON:0003929!7.05e-07!54 | |ontology_enrichment_uberon=UBERON:0000160!2.82e-18!27;UBERON:0009497!9.44e-16!25;UBERON:0000015!9.44e-16!25;UBERON:0002423!9.44e-16!25;UBERON:0006235!9.44e-16!25;UBERON:0004161!9.44e-16!25;UBERON:0002107!1.48e-15!19;UBERON:0006925!1.48e-15!19;UBERON:0008836!1.48e-15!19;UBERON:0002108!5.20e-14!14;UBERON:0005409!5.49e-14!35;UBERON:0008835!2.25e-13!22;UBERON:0003894!2.25e-13!22;UBERON:0009854!8.99e-13!23;UBERON:0007499!1.03e-11!25;UBERON:0005057!3.03e-11!26;UBERON:0009856!3.03e-11!26;UBERON:0004921!3.00e-10!129;UBERON:0004185!3.00e-10!129;UBERON:0001007!1.71e-09!155;UBERON:0001555!1.71e-09!155;UBERON:0007026!1.71e-09!155;UBERON:0002365!2.36e-09!31;UBERON:0002330!2.36e-09!31;UBERON:0001155!5.09e-09!9;UBERON:0005172!1.10e-08!55;UBERON:0005173!1.10e-08!55;UBERON:0004119!1.71e-08!169;UBERON:0000925!1.71e-08!169;UBERON:0006595!1.71e-08!169;UBERON:0000949!1.90e-08!45;UBERON:0002368!3.15e-08!35;UBERON:0002417!9.98e-08!61;UBERON:0000916!9.98e-08!61;UBERON:0000059!1.83e-07!11;UBERON:0003929!7.05e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.29e-18;4!UBERON:0000160;9.94e-12;17!UBERON:0002107;4.07e-11;19!UBERON:0006925;4.07e-11;19!UBERON:0005409;2.55e-09;22!UBERON:0002114;1.21e-08;2!UBERON:0002423;1.34e-08;25!UBERON:0000949;2.48e-07;43!UBERON:0002365;2.90e-07;31!UBERON:0002330;2.90e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.35e-18,4;UBERON:0000160,9.94e-12,17;UBERON:0002107,4.22e-11,19;UBERON:0006925,4.22e-11,19;UBERON:0008836,4.22e-11,19;UBERON:0008835,1.12e-09,22;UBERON:0003894,1.12e-09,22;UBERON:0009854,2.78e-09,23;UBERON:0002114,1.21e-08,2;UBERON:0007499,1.37e-08,25;UBERON:0009497,1.37e-08,25;UBERON:0000015,1.37e-08,25;UBERON:0002423,1.37e-08,25;UBERON:0006235,1.37e-08,25;UBERON:0004161,1.37e-08,25;UBERON:0005409,2.59e-08,25;UBERON:0009856,2.79e-08,26;UBERON:0000949,3.30e-08,45;UBERON:0002365,4.87e-07,31;UBERON:0002330,4.87e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,5.49927130440263,0.296521128680622,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,5.24542945209498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,5.49927130440263,0.296521128680622,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,5.24542945209498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:25781321..25781354,+ | |short_description=p@chr6:25781321..25781354,+ | ||
}} | }} |
Latest revision as of 22:53, 30 July 2015
Short description: | p@chr6:25781321..25781354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:25781321..25781354, + |
Coexpression cluster: | C1603_Hepatocyte_colon_duodenum_small_gall_temporal_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.63e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.35e-18 | 4 |
intestine | 9.94e-12 | 17 |
liver | 4.22e-11 | 19 |
digestive gland | 4.22e-11 | 19 |
liver bud | 4.22e-11 | 19 |
hepatic diverticulum | 1.12e-09 | 22 |
liver primordium | 1.12e-09 | 22 |
digestive tract diverticulum | 2.78e-09 | 23 |
duodenum | 1.21e-08 | 2 |
epithelial sac | 1.37e-08 | 25 |
epithelium of foregut-midgut junction | 1.37e-08 | 25 |
anatomical boundary | 1.37e-08 | 25 |
hepatobiliary system | 1.37e-08 | 25 |
foregut-midgut junction | 1.37e-08 | 25 |
septum transversum | 1.37e-08 | 25 |
gastrointestinal system | 2.59e-08 | 25 |
sac | 2.79e-08 | 26 |
endocrine system | 3.30e-08 | 45 |
exocrine gland | 4.87e-07 | 31 |
exocrine system | 4.87e-07 | 31 |