FFCP PHASE1:Hg19::chr6:168479856..168479904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79981 | |EntrezGene=79981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21240 | |HGNC=21240 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000358587_5end | |association_with_transcript=0bp_to_ENST00000358587_5end | ||
|cluster_id=chr6:168479856..168479904,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_1_at_FRMD1_5end | |description=CAGE_peak_1_at_FRMD1_5end | ||
|id=chr6:168479856..168479904,- | |id=chr6:168479856..168479904,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.16e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.61e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.29e-10;1!UBERON:0008801;3.29e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.59e-35!115;UBERON:0005409!4.23e-12!35;UBERON:0000160!6.24e-12!27;UBERON:0000059!1.91e-10!11;UBERON:0002240!3.95e-10!3;UBERON:0002298!1.24e-09!8;UBERON:0001896!1.39e-09!3;UBERON:0005290!1.39e-09!3;UBERON:0010096!1.39e-09!3;UBERON:0004921!1.69e-08!129;UBERON:0004185!1.69e-08!129;UBERON:0002950!9.59e-08!2;UBERON:0001891!9.59e-08!2;UBERON:0009616!9.59e-08!2;UBERON:0001007!1.51e-07!155;UBERON:0001555!1.51e-07!155;UBERON:0007026!1.51e-07!155;UBERON:0001630!1.95e-07!2;UBERON:0005090!1.95e-07!2;UBERON:0004119!4.31e-07!169;UBERON:0000925!4.31e-07!169;UBERON:0006595!4.31e-07!169;UBERON:0003076!8.66e-07!15;UBERON:0003057!8.66e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!9.59e-35!115;UBERON:0005409!4.23e-12!35;UBERON:0000160!6.24e-12!27;UBERON:0000059!1.91e-10!11;UBERON:0002240!3.95e-10!3;UBERON:0002298!1.24e-09!8;UBERON:0001896!1.39e-09!3;UBERON:0005290!1.39e-09!3;UBERON:0010096!1.39e-09!3;UBERON:0004921!1.69e-08!129;UBERON:0004185!1.69e-08!129;UBERON:0002950!9.59e-08!2;UBERON:0001891!9.59e-08!2;UBERON:0009616!9.59e-08!2;UBERON:0001007!1.51e-07!155;UBERON:0001555!1.51e-07!155;UBERON:0007026!1.51e-07!155;UBERON:0001630!1.95e-07!2;UBERON:0005090!1.95e-07!2;UBERON:0004119!4.31e-07!169;UBERON:0000925!4.31e-07!169;UBERON:0006595!4.31e-07!169;UBERON:0003076!8.66e-07!15;UBERON:0003057!8.66e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.18e-31;17!UBERON:0005409;3.77e-24;22!UBERON:0000059;1.18e-20;11!UBERON:0004921;7.17e-19;33!UBERON:0001155;1.64e-16;9!UBERON:0001154;3.29e-10;1!UBERON:0001831;3.29e-10;1!UBERON:0002146;3.29e-10;1!UBERON:0001153;3.29e-10;1!UBERON:0009854;3.29e-10;1!UBERON:0005623;3.29e-10;1!UBERON:0001567;3.29e-10;1!UBERON:0002108;4.07e-08;4!UBERON:0004907;4.07e-08;5!UBERON:0001555;1.42e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.11e-31,17;UBERON:0005409,3.37e-21,25;UBERON:0000059,1.18e-20,11;UBERON:0001155,1.71e-16,9;UBERON:0001831,2.74e-10,1;UBERON:0001567,2.74e-10,1;UBERON:0008801,2.74e-10,1;UBERON:0001154,3.61e-10,1;UBERON:0001153,3.61e-10,1;UBERON:0001045,3.61e-10,1;UBERON:0002146,3.96e-10,1;UBERON:0005623,3.96e-10,1;UBERON:0004907,4.07e-08,5;UBERON:0002108,4.22e-08,4 | |||
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| ||
|short_description=p1@FRMD1 | |short_description=p1@FRMD1 | ||
}} | }} |
Latest revision as of 22:17, 16 September 2015
Short description: | p1@FRMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FRMD1_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000358587_5end |
EntrezGene: | FRMD1 |
HGNC: | 21240 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.61e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.11e-31 | 17 |
gastrointestinal system | 3.37e-21 | 25 |
large intestine | 1.18e-20 | 11 |
colon | 1.71e-16 | 9 |
parotid gland | 2.74e-10 | 1 |
cheek | 2.74e-10 | 1 |
parotid gland primordium | 2.74e-10 | 1 |
vermiform appendix | 3.61e-10 | 1 |
caecum | 3.61e-10 | 1 |
midgut | 3.61e-10 | 1 |
pulmonary valve | 3.96e-10 | 1 |
semi-lunar valve | 3.96e-10 | 1 |
lower digestive tract | 4.07e-08 | 5 |
small intestine | 4.22e-08 | 4 |