FFCP PHASE1:Hg19::chr15:58357932..58357943,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:58357932..58357943,-
|short_description=p2@ALDH1A2
|description=CAGE_peak_2_at_ALDH1A2_5end
|association_with_transcript=0bp_to_ENST00000347587_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8854 | |EntrezGene=8854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15472 | |HGNC=15472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000347587_5end | |||
|cluster_id=chr15:58357932..58357943,- | |||
|description=CAGE_peak_2_at_ALDH1A2_5end | |||
|id=chr15:58357932..58357943,- | |||
|ontology_enrichment_celltype=CL:1000507!1.27e-08!12;CL:1000494!1.27e-08!12;CL:1000449!7.45e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.61e-11;19!CL:1000507;2.42e-09;10!CL:1000494;2.42e-09;10!CL:0000239;6.37e-09;3!CL:1000615;6.37e-09;3!CL:0002306;6.37e-09;3!CL:0002618;6.37e-09;3!CL:0002543;1.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.92e-11,19;CL:0002618,2.76e-09,3;CL:1000507,3.02e-09,10;CL:1000494,3.02e-09,10;CL:0000239,7.77e-09,3;CL:1000615,7.77e-09,3;CL:0002306,7.77e-09,3;CL:0002543,1.29e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.05e-07;10!UBERON:0007687;7.05e-07;10!UBERON:0007297;8.24e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.76e-20!115;UBERON:0003103!4.34e-11!69;UBERON:0000489!1.06e-09!32;UBERON:0002113!4.72e-09!27;UBERON:0003918!4.72e-09!27;UBERON:0005095!4.72e-09!27;UBERON:0007687!4.72e-09!27;UBERON:0004876!6.77e-09!20;UBERON:0000080!1.12e-08!18;UBERON:0002120!1.12e-08!18;UBERON:0004875!1.12e-08!18;UBERON:0005721!1.12e-08!18;UBERON:0005754!1.12e-08!18;UBERON:0007297!1.12e-08!18;UBERON:0009773!1.27e-08!12;UBERON:0001231!1.27e-08!12;UBERON:0004810!1.27e-08!12;UBERON:0003064!5.39e-08!37;UBERON:0003887!5.78e-08!21;UBERON:0006555!9.67e-08!17;UBERON:0005103!9.67e-08!17;UBERON:0000083!9.67e-08!17;UBERON:0009201!9.67e-08!17;UBERON:0004819!9.67e-08!17;UBERON:0006553!9.67e-08!17;UBERON:0003074!9.67e-08!17;UBERON:0003060!9.67e-08!17;UBERON:0001008!3.33e-07!45;UBERON:0004211!7.45e-07!16;UBERON:0001285!7.45e-07!16;UBERON:0007684!7.45e-07!16;UBERON:0003220!7.45e-07!16;UBERON:0004208!7.45e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.34e-09;3!UBERON:0004054;1.34e-09;3!UBERON:0002113;1.44e-09;24!UBERON:0011143;1.44e-09;24!UBERON:0004211;2.42e-09;10!UBERON:0009773;2.42e-09;10!UBERON:0001231;2.42e-09;10!UBERON:0004810;2.42e-09;10!UBERON:0003135;4.77e-09;11!UBERON:0006853;6.37e-09;3!UBERON:0007685;6.37e-09;3!UBERON:0004134;6.37e-09;3!UBERON:0000489;1.40e-07;29!UBERON:0001638;2.44e-07;9!UBERON:0003920;2.44e-07;9!UBERON:0004582;2.44e-07;9!UBERON:0005904;2.78e-07;4!UBERON:0006554;2.91e-07;30!UBERON:0001008;2.91e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.06e-12,26;UBERON:0003918,1.06e-12,26;UBERON:0011143,1.06e-12,26;UBERON:0005095,1.06e-12,26;UBERON:0007687,1.06e-12,26;UBERON:0000489,3.19e-10,31;UBERON:0006947,1.27e-09,3;UBERON:0004054,1.27e-09,3;UBERON:0005172,1.87e-09,54;UBERON:0005173,1.87e-09,54;UBERON:0004810,3.02e-09,10;UBERON:0003135,3.37e-09,11;UBERON:0006853,7.77e-09,3;UBERON:0007685,7.77e-09,3;UBERON:0004134,7.77e-09,3;UBERON:0007023,1.25e-08,114;UBERON:0006554,3.02e-08,47;UBERON:0002417,3.87e-08,60;UBERON:0000916,3.87e-08,60;UBERON:0001008,5.19e-08,48;UBERON:0006555,1.84e-07,16;UBERON:0004819,1.84e-07,16;UBERON:0001638,2.03e-07,9;UBERON:0003920,2.03e-07,9;UBERON:0004582,2.03e-07,9;UBERON:0005904,2.68e-07,4;UBERON:0003133,3.01e-07,48 | |||
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| ||
|short_description=p2@ALDH1A2 | |||
}} | }} |
Latest revision as of 06:43, 18 September 2015
Short description: | p2@ALDH1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALDH1A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347587_5end |
EntrezGene: | ALDH1A2 |
HGNC: | 15472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.92e-11 | 19 |
endothelial cell of umbilical vein | 2.76e-09 | 3 |
kidney tubule cell | 3.02e-09 | 10 |
nephron tubule epithelial cell | 3.02e-09 | 10 |
brush border epithelial cell | 7.77e-09 | 3 |
kidney cortex tubule cell | 7.77e-09 | 3 |
epithelial cell of proximal tubule | 7.77e-09 | 3 |
vein endothelial cell | 1.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.06e-12 | 26 |
kidney mesenchyme | 1.06e-12 | 26 |
upper urinary tract | 1.06e-12 | 26 |
kidney rudiment | 1.06e-12 | 26 |
kidney field | 1.06e-12 | 26 |
cavitated compound organ | 3.19e-10 | 31 |
male genital duct | 1.27e-09 | 3 |
internal male genitalia | 1.27e-09 | 3 |
abdomen element | 1.87e-09 | 54 |
abdominal segment element | 1.87e-09 | 54 |
nephron tubule epithelium | 3.02e-09 | 10 |
male reproductive organ | 3.37e-09 | 11 |
renal cortex tubule | 7.77e-09 | 3 |
region of nephron tubule | 7.77e-09 | 3 |
proximal tubule | 7.77e-09 | 3 |
adult organism | 1.25e-08 | 114 |
urinary system structure | 3.02e-08 | 47 |
abdominal segment of trunk | 3.87e-08 | 60 |
abdomen | 3.87e-08 | 60 |
renal system | 5.19e-08 | 48 |
excretory tube | 1.84e-07 | 16 |
kidney epithelium | 1.84e-07 | 16 |
vein | 2.03e-07 | 9 |
venous blood vessel | 2.03e-07 | 9 |
venous system | 2.03e-07 | 9 |
duct of male reproductive system | 2.68e-07 | 4 |
reproductive organ | 3.01e-07 | 48 |