FFCP PHASE1:Hg19::chr5:75379186..75379220,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22987 | |EntrezGene=22987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |HGNC=30670 | ||
|TSSclassifier=strong | |||
|UniProt=Q496J9 | |UniProt=Q496J9 | ||
|association_with_transcript=-18bp_to_ENST00000322285_5end | |association_with_transcript=-18bp_to_ENST00000322285_5end | ||
|cluster_id=chr5:75379186..75379220,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_SV2C_5end | |description=CAGE_peak_1_at_SV2C_5end | ||
|id=chr5:75379186..75379220,+ | |id=chr5:75379186..75379220,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.32e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.12e-19;82!UBERON:0006241;2.02e-07;3!UBERON:0003057;2.02e-07;3!UBERON:0006215;6.81e-07;3!UBERON:0002532;9.72e-07;206!UBERON:0010316;9.72e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;3.70e-09;6!DOID:171;2.14e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.49e-09,6;DOID:171,2.06e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.55e-51!57;UBERON:0005068!5.55e-51!57;UBERON:0006241!5.55e-51!57;UBERON:0007135!5.55e-51!57;UBERON:0007023!2.15e-50!115;UBERON:0000073!2.00e-49!94;UBERON:0001016!2.00e-49!94;UBERON:0001017!1.33e-46!82;UBERON:0005743!3.53e-45!86;UBERON:0002616!8.61e-42!59;UBERON:0002780!1.45e-39!41;UBERON:0001890!1.45e-39!41;UBERON:0006240!1.45e-39!41;UBERON:0000955!2.00e-39!69;UBERON:0006238!2.00e-39!69;UBERON:0003080!2.74e-38!42;UBERON:0002346!7.36e-38!90;UBERON:0003075!2.15e-37!86;UBERON:0007284!2.15e-37!86;UBERON:0002020!3.74e-35!34;UBERON:0003528!3.74e-35!34;UBERON:0001893!8.20e-35!34;UBERON:0002791!1.63e-33!33;UBERON:0001869!6.10e-33!32;UBERON:0002619!4.27e-26!22;UBERON:0003056!7.60e-25!61;UBERON:0001950!3.09e-24!20;UBERON:0000956!6.59e-24!25;UBERON:0000203!6.59e-24!25;UBERON:0000924!8.52e-24!173;UBERON:0006601!8.52e-24!173;UBERON:0004121!4.67e-23!169;UBERON:0000033!7.14e-17!123;UBERON:0000153!1.12e-16!129;UBERON:0007811!1.12e-16!129;UBERON:0003076!2.17e-13!15;UBERON:0003057!2.17e-13!15;UBERON:0002308!7.84e-13!9;UBERON:0000125!7.84e-13!9;UBERON:0002420!3.18e-12!9;UBERON:0007245!3.18e-12!9;UBERON:0010009!3.18e-12!9;UBERON:0010011!3.18e-12!9;UBERON:0000454!3.18e-12!9;UBERON:0000025!2.72e-11!194;UBERON:0004732!5.39e-11!13;UBERON:0009663!2.86e-10!7;UBERON:0004733!4.90e-10!12;UBERON:0002028!4.90e-10!12;UBERON:0007277!4.90e-10!12;UBERON:0001871!1.19e-09!7;UBERON:0000200!1.11e-08!6;UBERON:0002298!2.39e-08!8;UBERON:0004111!2.64e-08!241;UBERON:0000922!4.04e-08!612;UBERON:0001872!1.25e-07!5;UBERON:0000013!2.38e-07!5;UBERON:0002410!2.38e-07!5;UBERON:0000064!5.31e-07!219;UBERON:0000369!5.68e-07!4;UBERON:0002435!5.68e-07!4;UBERON:0000204!5.68e-07!4;UBERON:0010082!5.68e-07!4;UBERON:0002050!7.86e-07!605;UBERON:0005423!7.86e-07!605;UBERON:0002021!8.57e-07!5;UBERON:0003135!8.68e-07!11;UBERON:0000349!9.93e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!5.55e-51!57;UBERON:0005068!5.55e-51!57;UBERON:0006241!5.55e-51!57;UBERON:0007135!5.55e-51!57;UBERON:0007023!2.15e-50!115;UBERON:0000073!2.00e-49!94;UBERON:0001016!2.00e-49!94;UBERON:0001017!1.33e-46!82;UBERON:0005743!3.53e-45!86;UBERON:0002616!8.61e-42!59;UBERON:0002780!1.45e-39!41;UBERON:0001890!1.45e-39!41;UBERON:0006240!1.45e-39!41;UBERON:0000955!2.00e-39!69;UBERON:0006238!2.00e-39!69;UBERON:0003080!2.74e-38!42;UBERON:0002346!7.36e-38!90;UBERON:0003075!2.15e-37!86;UBERON:0007284!2.15e-37!86;UBERON:0002020!3.74e-35!34;UBERON:0003528!3.74e-35!34;UBERON:0001893!8.20e-35!34;UBERON:0002791!1.63e-33!33;UBERON:0001869!6.10e-33!32;UBERON:0002619!4.27e-26!22;UBERON:0003056!7.60e-25!61;UBERON:0001950!3.09e-24!20;UBERON:0000956!6.59e-24!25;UBERON:0000203!6.59e-24!25;UBERON:0000924!8.52e-24!173;UBERON:0006601!8.52e-24!173;UBERON:0004121!4.67e-23!169;UBERON:0000033!7.14e-17!123;UBERON:0000153!1.12e-16!129;UBERON:0007811!1.12e-16!129;UBERON:0003076!2.17e-13!15;UBERON:0003057!2.17e-13!15;UBERON:0002308!7.84e-13!9;UBERON:0000125!7.84e-13!9;UBERON:0002420!3.18e-12!9;UBERON:0007245!3.18e-12!9;UBERON:0010009!3.18e-12!9;UBERON:0010011!3.18e-12!9;UBERON:0000454!3.18e-12!9;UBERON:0000025!2.72e-11!194;UBERON:0004732!5.39e-11!13;UBERON:0009663!2.86e-10!7;UBERON:0004733!4.90e-10!12;UBERON:0002028!4.90e-10!12;UBERON:0007277!4.90e-10!12;UBERON:0001871!1.19e-09!7;UBERON:0000200!1.11e-08!6;UBERON:0002298!2.39e-08!8;UBERON:0004111!2.64e-08!241;UBERON:0000922!4.04e-08!612;UBERON:0001872!1.25e-07!5;UBERON:0000013!2.38e-07!5;UBERON:0002410!2.38e-07!5;UBERON:0000064!5.31e-07!219;UBERON:0000369!5.68e-07!4;UBERON:0002435!5.68e-07!4;UBERON:0000204!5.68e-07!4;UBERON:0010082!5.68e-07!4;UBERON:0002050!7.86e-07!605;UBERON:0005423!7.86e-07!605;UBERON:0002021!8.57e-07!5;UBERON:0003135!8.68e-07!11;UBERON:0000349!9.93e-07!5 | ||
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|short_description=p1@SV2C | |short_description=p1@SV2C | ||
}} | }} |
Latest revision as of 17:48, 18 September 2015
Short description: | p1@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SV2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -18bp_to_ENST00000322285_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | Q496J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.49e-09 | 6 |
neuroectodermal tumor | 2.06e-07 | 10 |