FFCP PHASE1:Hg19::chr5:58571807..58571821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=123bp_to_ENST00000503258,NM_001197220,uc003jrv.2_5end | |association_with_transcript=123bp_to_ENST00000503258,NM_001197220,uc003jrv.2_5end | ||
|cluster_id=chr5:58571807..58571821,- | |||
|coexpression_cluster_id=C2825 | |||
|description=CAGE_peak_24_at_PDE4D_5end | |description=CAGE_peak_24_at_PDE4D_5end | ||
|id=chr5:58571807..58571821,- | |id=chr5:58571807..58571821,- | ||
|ontology_enrichment_celltype=CL:0002150!2.62e-07!3;CL:0000861!2.62e-07!3 | |ontology_enrichment_celltype=CL:0002150!2.62e-07!3;CL:0000861!2.62e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.77e-43;29!UBERON:0006595;8.58e-08;86!UBERON:0000358;3.51e-07;1!UBERON:0005754;3.51e-07;1!UBERON:0006242;6.01e-07;1 | |||
|ontology_enrichment_disease=DOID:305!9.18e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.47e-13,106;DOID:0050687,1.29e-08,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;3.58e-52;9!UBERON:0001557;3.58e-52;9!UBERON:0000065;6.81e-24;44!UBERON:0000072;2.33e-21;37!UBERON:0001004;9.52e-11;65!UBERON:0002110;5.97e-09;3!UBERON:0002294;2.33e-08;7!UBERON:0001173;2.33e-08;7!UBERON:0000998;3.51e-07;1!UBERON:0002135;3.51e-07;1!UBERON:0002171;3.51e-07;1!UBERON:0006868;3.51e-07;1!UBERON:0006518;3.51e-07;1!UBERON:0008949;3.51e-07;1!UBERON:0000101;3.51e-07;1!UBERON:0002167;3.51e-07;1 | |||
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| ||
|short_description=p24@PDE4D | |short_description=p24@PDE4D | ||
}} | }} |
Latest revision as of 07:34, 18 September 2015
Short description: | p24@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PDE4D_5end |
Coexpression cluster: | C2825_cervical_gall_bile_rectal_epitheloid_large_umbilical |
Association with transcript: | 123bp_to_ENST00000503258, NM_001197220, uc003jrv.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 3.69e-52 | 9 |
respiratory primordium | 5.56e-32 | 38 |
endoderm of foregut | 5.56e-32 | 38 |
upper respiratory tract | 5.87e-24 | 19 |
respiratory tract | 1.39e-21 | 54 |
segment of respiratory tract | 1.01e-18 | 47 |
respiratory system | 6.55e-15 | 74 |
foregut | 3.88e-14 | 87 |
digestive system | 1.42e-13 | 145 |
digestive tract | 1.42e-13 | 145 |
primitive gut | 1.42e-13 | 145 |
subdivision of digestive tract | 2.31e-12 | 118 |
primordium | 5.58e-12 | 160 |
endoderm-derived structure | 6.71e-12 | 160 |
endoderm | 6.71e-12 | 160 |
presumptive endoderm | 6.71e-12 | 160 |
gallbladder | 5.19e-09 | 3 |
gall bladder primordium | 5.19e-09 | 3 |
lower lobe of right lung | 2.84e-07 | 1 |
right lung lobe | 2.84e-07 | 1 |
lower lobe of lung | 2.84e-07 | 1 |
lobe of lung | 2.84e-07 | 1 |
right lung | 2.84e-07 | 1 |
mitral valve | 3.02e-07 | 1 |
seminal vesicle | 4.60e-07 | 1 |
seminal fluid secreting gland | 4.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.47e-13 | 106 |
cell type cancer | 1.29e-08 | 143 |