FFCP PHASE1:Hg19::chr15:52821282..52821295,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:52821282..52821295,-
|short_description=p4@MYO5A
|description=CAGE_peak_4_at_MYO5A_5end
|association_with_transcript=-35bp_to_ENST00000356338,ENST00000399...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4644 | |EntrezGene=4644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7602 | |HGNC=7602 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4I1,F8WE88,F5H363,Q9UES4,A8CDT9 | |UniProt=Q9Y4I1,F8WE88,F5H363,Q9UES4,A8CDT9 | ||
|association_with_transcript=-35bp_to_ENST00000356338,ENST00000399231,ENST00000399233,ENST00000546028,NM_000259,NM_001142495,uc002abx.3,uc002aby.2,uc010uge.1_5end | |||
|cluster_id=chr15:52821282..52821295,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_MYO5A_5end | |||
|id=chr15:52821282..52821295,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.77e-18;10!CL:0000147;1.34e-12;14!CL:0002567;6.39e-12;3!CL:0000710;1.63e-08;20!CL:0000075;7.48e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.67e-18,10;CL:0000541,4.67e-18,10;CL:0000147,1.32e-12,14;CL:0002567,6.66e-12,3;CL:0000710,1.61e-08,20;CL:0000075,7.09e-08,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-27!82;UBERON:0001049!2.74e-26!57;UBERON:0005068!2.74e-26!57;UBERON:0006241!2.74e-26!57;UBERON:0007135!2.74e-26!57;UBERON:0005743!5.31e-26!86;UBERON:0000073!2.82e-25!94;UBERON:0001016!2.82e-25!94;UBERON:0001893!2.11e-24!34;UBERON:0002020!1.08e-23!34;UBERON:0003528!1.08e-23!34;UBERON:0002791!1.52e-23!33;UBERON:0002780!1.89e-23!41;UBERON:0001890!1.89e-23!41;UBERON:0006240!1.89e-23!41;UBERON:0001869!1.92e-23!32;UBERON:0000955!5.99e-23!69;UBERON:0006238!5.99e-23!69;UBERON:0003080!1.91e-22!42;UBERON:0002616!6.05e-22!59;UBERON:0003075!9.49e-19!86;UBERON:0007284!9.49e-19!86;UBERON:0000956!4.36e-18!25;UBERON:0000203!4.36e-18!25;UBERON:0002346!1.97e-17!90;UBERON:0002619!3.16e-17!22;UBERON:0003056!2.52e-16!61;UBERON:0001950!7.01e-16!20;UBERON:0004121!1.01e-15!169;UBERON:0000924!5.06e-15!173;UBERON:0006601!5.06e-15!173;UBERON:0000033!8.08e-15!123;UBERON:0000153!1.53e-14!129;UBERON:0007811!1.53e-14!129;UBERON:0007023!1.19e-13!115;UBERON:0002420!8.23e-08!9;UBERON:0007245!8.23e-08!9;UBERON:0010009!8.23e-08!9;UBERON:0010011!8.23e-08!9;UBERON:0000454!8.23e-08!9;UBERON:0002308!4.77e-07!9;UBERON:0000125!4.77e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.03e-68;20!UBERON:0002619;4.73e-68;22!UBERON:0001869;5.09e-64;32!UBERON:0000956;1.43e-59;25!UBERON:0000203;1.43e-59;25!UBERON:0002791;1.94e-59;32!UBERON:0001893;3.97e-58;34!UBERON:0003528;1.93e-54;34!UBERON:0002020;1.93e-54;34!UBERON:0002780;1.33e-42;41!UBERON:0001890;1.33e-42;41!UBERON:0000073;7.98e-35;53!UBERON:0002616;7.98e-35;53!UBERON:0000955;4.76e-29;68!UBERON:0001017;1.12e-25;75!UBERON:0000200;1.42e-22;6!UBERON:0001016;1.72e-20;83!UBERON:0001872;2.13e-19;5!UBERON:0002021;3.77e-19;5!UBERON:0001871;9.71e-19;6!UBERON:0002420;4.19e-15;9!UBERON:0007245;4.19e-15;9!UBERON:0010009;4.19e-15;9!UBERON:0010011;4.19e-15;9!UBERON:0000454;4.19e-15;9!UBERON:0000349;2.44e-12;5!UBERON:0001870;3.23e-12;3!UBERON:0000369;5.77e-10;4!UBERON:0002435;5.77e-10;4!UBERON:0000204;5.77e-10;4!UBERON:0007023;2.31e-09;114!UBERON:0009663;2.44e-09;7!UBERON:0002771;2.11e-08;2!UBERON:0001876;2.11e-08;2!UBERON:0002702;2.11e-08;2!UBERON:0011216;5.46e-08;132!UBERON:0000125;2.93e-07;9!UBERON:0002308;2.93e-07;9!UBERON:0004732;4.20e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.65e-73,32;UBERON:0001950,1.24e-68,20;UBERON:0002619,1.54e-68,22;UBERON:0001893,2.38e-68,34;UBERON:0002791,6.45e-67,32;UBERON:0003528,1.01e-62,34;UBERON:0002020,1.01e-62,34;UBERON:0001049,3.64e-61,56;UBERON:0005068,3.64e-61,56;UBERON:0006241,3.64e-61,56;UBERON:0007135,3.64e-61,56;UBERON:0000073,6.22e-61,53;UBERON:0002616,6.22e-61,53;UBERON:0002780,2.70e-60,41;UBERON:0001890,2.70e-60,41;UBERON:0003080,2.70e-60,41;UBERON:0006240,2.70e-60,41;UBERON:0000956,5.32e-60,25;UBERON:0000203,5.32e-60,25;UBERON:0000955,1.96e-55,68;UBERON:0006238,1.96e-55,68;UBERON:0001017,1.45e-54,81;UBERON:0001016,2.28e-51,89;UBERON:0003075,2.65e-45,82;UBERON:0007284,2.65e-45,82;UBERON:0003056,3.41e-45,61;UBERON:0002346,7.80e-43,86;UBERON:0010371,2.81e-36,104;UBERON:0010314,6.33e-27,132;UBERON:0007023,7.30e-27,114;UBERON:0004121,5.58e-26,171;UBERON:0000924,5.58e-26,171;UBERON:0006601,5.58e-26,171;UBERON:0000200,7.82e-23,6;UBERON:0001872,2.91e-19,5;UBERON:0002021,3.51e-19,5;UBERON:0001871,3.69e-19,6;UBERON:0011216,1.02e-17,223;UBERON:0002420,3.81e-15,9;UBERON:0007245,3.81e-15,9;UBERON:0010009,3.81e-15,9;UBERON:0010011,3.81e-15,9;UBERON:0000454,3.81e-15,9;UBERON:0000025,1.44e-13,192;UBERON:0000349,1.71e-12,5;UBERON:0001870,2.68e-12,3;UBERON:0000369,6.41e-10,4;UBERON:0002435,6.41e-10,4;UBERON:0000204,6.41e-10,4;UBERON:0010082,6.41e-10,4;UBERON:0004111,2.45e-09,240;UBERON:0009663,3.06e-09,7;UBERON:0001876,1.22e-08,2;UBERON:0002771,1.54e-08,2;UBERON:0002702,1.66e-08,2;UBERON:0000483,1.19e-07,306;UBERON:0000119,1.68e-07,309;UBERON:0000125,3.48e-07,9;UBERON:0002308,3.48e-07,9;UBERON:0004732,4.23e-07,13 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.502170558379211,0,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0.739508020333575,0.232401601740905,0.142169232487422,0,0,0,0,0.447830948479849,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0.443067789167242,0,0.384273959177026,0.260118695119756,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0.649094787309367,0,0,0.476981248610684,0,0,0,0.860234595106124,0.347140501607594,1.69592382577203,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0.71153252537342,0,0,0,0,0.367663080345869,0,0.535798369704479,0.44905874525234,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0.23486899728753,0.323745888736263,0.98315564691574,0.408308342509787,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0.161646056818812,0,0,0.169560592310488,0,0.818238361772504,0,0.365921118388786,0.530119073285941,0.116193942869518,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0.201057944823262,0,0,0,2.88662684050547,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0.288239906833923,0.12624243342638,2.92090313743978,2.67391897890794,2.34434894420094,1.71072446022705,2.57068731758309,2.40274446275134,4.57322292208925,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.358121926479791,0.112085143993527,0.394061520403854,0.862510299438069,0.256686072559497,0.76228387266739,0,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0.574265537996172,0,0,0.290012154876366,0,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0.354761064070598,0,0.329294892959902,0,0,0.192444225451024,1.34060455107157,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0.28853842595289,0.284567373393656,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0.307160702099232,2.98244294329889,1.82870241333667,0.333926115068718,0,0,0,0,0.251932747854276,0.920418142519393,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,2.41197055220813,1.99613798001194,0.520855522170466,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,4.5826646677655,3.05163472634166,0.774054819518572,1.77328571372128,2.19385397153973,0,0.278847488557207,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,0.876214728748802,0,1.63985112007737,0,0.19566461893209,0,0,0,1.83643656978294,0.442306057399416,0.300646838828985,0.207376382794494,0,0,0.313932918407225,1.19472429772959,0,0.554698692052555,0,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0.137041924646751,0,4.24182332904387,0,0.240476460754601,0,0.19980960958213,0,0,0,0,0.248505071130865,0.235694034616795,0,0.209205692624666,0,0,1.20084057741958,0.684526894459965,1.27746588066972,0,0,0,0.229160424011684,0,0.399358000997982,0,0,0.134366944973453,0,0,0,0,0.0674035438541849,0.0984274815147488,0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| ||
|short_description=p4@MYO5A | |||
}} | }} |
Latest revision as of 02:48, 18 September 2015
Short description: | p4@MYO5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYO5A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -35bp_to_ENST00000356338, ENST00000399231, ENST00000399233, ENST00000546028, NM_000259, NM_001142495, uc002abx.3, uc002aby.2, uc010uge.1_5end |
EntrezGene: | MYO5A |
HGNC: | 7602 |
UniProt: | Q9Y4I1F8WE88F5H363Q9UES4A8CDT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.67e-18 | 10 |
melanoblast | 4.67e-18 | 10 |
pigment cell | 1.32e-12 | 14 |
light melanocyte | 6.66e-12 | 3 |
neurecto-epithelial cell | 1.61e-08 | 20 |
columnar/cuboidal epithelial cell | 7.09e-08 | 27 |