FFCP PHASE1:Hg19::chr5:127874263..127874282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2201 | |EntrezGene=2201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3604 | |HGNC=3604 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHW4 | |UniProt=E9PHW4 | ||
|association_with_transcript=-347bp_to_ENST00000502468,ENST00000514742,uc003kuw.3,uc003kux.1_5end | |association_with_transcript=-347bp_to_ENST00000502468,ENST00000514742,uc003kuw.3,uc003kux.1_5end | ||
|cluster_id=chr5:127874263..127874282,- | |||
|description=CAGE_peak_5_at_FBN2_5end | |description=CAGE_peak_5_at_FBN2_5end | ||
|id=chr5:127874263..127874282,- | |id=chr5:127874263..127874282,- | ||
|ontology_enrichment_celltype=CL:0000055!2.50e-12!180;CL:0000057!3.46e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.50e-12!180;CL:0000057!3.46e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.40e-12;2!CL:0002586;2.12e-08;3!CL:0000064;2.68e-08;3!CL:0000067;2.68e-08;3!CL:0005012;2.68e-08;3!CL:0002304;2.68e-08;3!CL:0000222;3.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.12e-08,3;CL:0000067,2.12e-08,3;CL:0005012,2.12e-08,3;CL:0002304,2.12e-08,3;CL:0002586,2.55e-08,3;CL:0002550,6.60e-07,1;CL:0000228,9.79e-07,1;CL:0002372,9.79e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.82e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.95e-07;1!DOID:4549;2.95e-07;1!DOID:5861;2.95e-07;1!DOID:6496;2.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.95e-07,1;DOID:4549,2.95e-07,1;DOID:5861,2.95e-07,1;DOID:6496,2.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!5.32e-07!11 | |ontology_enrichment_uberon=UBERON:0007625!5.32e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.19e-17;11!UBERON:0001456;7.72e-12;21!UBERON:0000019;7.89e-10;19!UBERON:0000047;7.89e-10;19!UBERON:0004088;7.89e-10;19!UBERON:0010230;7.89e-10;19!UBERON:0000970;2.62e-09;20!UBERON:0002104;7.74e-09;21!UBERON:0001781;2.12e-08;3!UBERON:0001782;2.12e-08;3!UBERON:0001778;2.68e-08;3!UBERON:0001775;2.68e-08;3!UBERON:0000020;5.10e-08;23!UBERON:0010371;8.21e-08;31!UBERON:0001032;1.17e-07;24!UBERON:0004456;1.17e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.44e-17,11;UBERON:0001456,3.01e-11,22;UBERON:0000019,2.77e-09,20;UBERON:0000047,2.77e-09,20;UBERON:0010312,2.77e-09,20;UBERON:0004088,2.77e-09,20;UBERON:0010230,2.77e-09,20;UBERON:0003072,2.77e-09,20;UBERON:0004128,2.77e-09,20;UBERON:0003071,2.77e-09,20;UBERON:0000970,8.16e-09,21;UBERON:0002104,8.16e-09,21;UBERON:0001778,2.12e-08,3;UBERON:0001775,2.12e-08,3;UBERON:0001782,2.55e-08,3;UBERON:0005424,2.55e-08,3;UBERON:0005085,1.13e-07,31;UBERON:0000020,1.22e-07,24;UBERON:0001032,1.22e-07,24;UBERON:0004456,1.22e-07,24 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,2.18441372130172,0.791300934685361,0,0,0,0.602694528023977,0.730310090387373,0,0.861847406537515,0.204000691244253,0,0.572471974262113,1.36874425072884,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,1.60709189178915,2.21729397462564,0.87834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.446498641420399,0,0.337834441449967,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0.942974704487816,0.490385709340376,1.81628913173918,0,1.87457145467037,0,0,0,0.587172493218824,0.809364721840658,0.702254033511242,0.204154171254893,0.245668634623536,0.929932030581889,0,0.494533858557114,0,0,0.168336113954066,0.500474079487857,0.554128230968366,0.438977620880838,0,0.300476117813194,0.226864366320042,1.4351170855109,0.213557388818567,0,0,0.309157587715317,0,0,0.675105328965065,0.292311015483596,0.757301322732344,0.184099797284599,0.161646056818812,2.13005755509969,0.302256294682921,0.169560592310488,0,0,0.286804595389004,0,0.662648841607426,0.232387885739037,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.833296006426766,0.325808305310325,0,0,0.811512834825538,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.2933531432838,0.775630294546667,0,0.845302752556,0.26593811658487,0,0.771622122786426,1.41849132023278,0,0.285955987316295,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.599837947092342,0,0,0,0.958499421966331,1.14861935834114,1.42636905040718,0.434343920002738,0,0.179060963239896,0,0,0,0,2.7950408664471,3.90419561572865,0,0.335032530668698,0.637938751653163,0,0,0,0.736148950314839,0.500170521059677,0,0.415941723061614,0.178428988797162,0.473107245101804,0,0.601892199455438,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0.61384789315225,0.841980283299221,0.768834895534206,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0.601519410909855,0.276242966807689,0.114814448164607,0.364182336013434,0.524497659837696,0,0.15403067420883,0,0,0.73886140225013,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,1.31205858279882,3.25378394664303,0.824328093181778,0.54941678891006,0.495056999523528,1.14853107599234,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0.322260734604821,1.16013355131383,0.170453254832202,0.356128142586949,0.495854746082934,0,0.893288987462089,0.6069466851333,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,1.71175595213568,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.573645408816206,0.785992328104969,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.564862804660675,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0.626719583092093,0,0,0,0.403599414382095,0.425846237690326,0.343505344755765,0,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.36408156524854,0,0,0,0,0.307160702099232,0,0.140669416410513,0.779160935160341,0,0.422250816255987,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,2.43074992906609,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,1.55532287095871,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,5.11885534810702,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2764859772478,0.360299883542404,0,0,0,0,0,0,0,0,0.803765742325096,0.962776056180637,0.83088067605837,0,0,0,0,0,1.36381929150995,0.422401346077626,0,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.679872549120754,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,3.78554694685953,0,0.857766365499703,0.521988583930423,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0.3454303417311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| ||
|short_description=p5@FBN2 | |short_description=p5@FBN2 | ||
}} | }} |
Latest revision as of 03:01, 20 September 2015
Short description: | p5@FBN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FBN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -347bp_to_ENST00000502468, ENST00000514742, uc003kuw.3, uc003kux.1_5end |
EntrezGene: | FBN2 |
HGNC: | 3604 |
UniProt: | E9PHW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.12e-08 | 3 |
ciliated epithelial cell | 2.12e-08 | 3 |
multi-ciliated epithelial cell | 2.12e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.12e-08 | 3 |
retinal pigment epithelial cell | 2.55e-08 | 3 |
fibroblast of the conjuctiva | 6.60e-07 | 1 |
multinucleate cell | 9.79e-07 | 1 |
myotube | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.44e-17 | 11 |
face | 3.01e-11 | 22 |
camera-type eye | 2.77e-09 | 20 |
simple eye | 2.77e-09 | 20 |
immature eye | 2.77e-09 | 20 |
ocular region | 2.77e-09 | 20 |
eyeball of camera-type eye | 2.77e-09 | 20 |
optic cup | 2.77e-09 | 20 |
optic vesicle | 2.77e-09 | 20 |
eye primordium | 2.77e-09 | 20 |
eye | 8.16e-09 | 21 |
visual system | 8.16e-09 | 21 |
ciliary epithelium | 2.12e-08 | 3 |
ciliary body | 2.12e-08 | 3 |
pigmented layer of retina | 2.55e-08 | 3 |
presumptive retinal pigmented epithelium | 2.55e-08 | 3 |
ectodermal placode | 1.13e-07 | 31 |
sense organ | 1.22e-07 | 24 |
sensory system | 1.22e-07 | 24 |
entire sense organ system | 1.22e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.95e-07 | 1 |
extraosseous chondrosarcoma | 2.95e-07 | 1 |
myxoid chondrosarcoma | 2.95e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.95e-07 | 1 |