FFCP PHASE1:Hg19::chr4:190478670..190478674,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:190478670..190478674,+ | |||
|description=CAGE_peak_at_chr4:190478670..190478674,+ | |description=CAGE_peak_at_chr4:190478670..190478674,+ | ||
|id=chr4:190478670..190478674,+ | |id=chr4:190478670..190478674,+ | ||
|ontology_enrichment_celltype=CL:0000214!2.60e-08!3 | |ontology_enrichment_celltype=CL:0000214!2.60e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;7.98e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.98e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.73e-17!8;DOID:162!8.45e-11!235;DOID:14566!1.84e-10!239;DOID:2531!2.11e-09!51;DOID:0060083!2.11e-09!51;DOID:0050686!3.44e-08!137;DOID:1240!3.63e-08!39;DOID:8692!3.64e-08!31;DOID:0050619!3.78e-07!1;DOID:1357!3.78e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.03e-17;1!DOID:1357;1.03e-17;1!DOID:1036;2.95e-09;8!DOID:8692;8.30e-09;31!DOID:1240;1.82e-07;39!DOID:2531;3.37e-07;51!DOID:0060083;3.37e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.44e-17,1;DOID:1357,1.44e-17,1;DOID:1036,2.77e-09,8;DOID:8692,6.60e-09,31;DOID:2531,3.34e-08,51;DOID:0060083,3.34e-08,51;DOID:162,1.43e-07,235;DOID:14566,2.15e-07,239;DOID:1240,3.95e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0006915!2.60e-08!3;UBERON:0002018!2.60e-08!3;UBERON:0002217!2.60e-08!3;UBERON:0007616!2.60e-08!3;UBERON:0006331!4.20e-08!3;UBERON:0001282!3.36e-07!1;UBERON:0009842!3.36e-07!1;UBERON:0003704!3.36e-07!1;UBERON:0001171!3.36e-07!1;UBERON:0001172!3.36e-07!1;UBERON:0001764!3.78e-07!1;UBERON:0001825!3.78e-07!1;UBERON:0002146!7.57e-07!1;UBERON:0005623!7.57e-07!1;UBERON:0000473!9.84e-07!8 | |ontology_enrichment_uberon=UBERON:0006915!2.60e-08!3;UBERON:0002018!2.60e-08!3;UBERON:0002217!2.60e-08!3;UBERON:0007616!2.60e-08!3;UBERON:0006331!4.20e-08!3;UBERON:0001282!3.36e-07!1;UBERON:0009842!3.36e-07!1;UBERON:0003704!3.36e-07!1;UBERON:0001171!3.36e-07!1;UBERON:0001172!3.36e-07!1;UBERON:0001764!3.78e-07!1;UBERON:0001825!3.78e-07!1;UBERON:0002146!7.57e-07!1;UBERON:0005623!7.57e-07!1;UBERON:0000473!9.84e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.03e-17;1!UBERON:0001764;1.03e-17;1!UBERON:0009842;1.03e-17;1!UBERON:0003704;1.03e-17;1!UBERON:0001825;1.03e-17;1!UBERON:0001171;1.03e-17;1!UBERON:0001172;1.03e-17;1!UBERON:0002294;1.68e-10;7!UBERON:0001173;1.68e-10;7!UBERON:0002110;5.80e-07;3!UBERON:0002106;6.69e-07;3!UBERON:0001280;9.11e-07;3!UBERON:0004647;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.03e-17,1;UBERON:0009842,1.03e-17,1;UBERON:0003704,1.03e-17,1;UBERON:0001171,1.03e-17,1;UBERON:0001172,1.03e-17,1;UBERON:0001764,1.44e-17,1;UBERON:0001825,1.44e-17,1;UBERON:0002294,2.29e-08,9;UBERON:0001173,2.29e-08,9;UBERON:0004912,2.29e-08,9;UBERON:0002110,5.80e-07,3;UBERON:0006242,5.80e-07,3;UBERON:0002106,7.28e-07,3;UBERON:0004854,7.28e-07,3;UBERON:0009034,7.28e-07,3;UBERON:0002095,7.28e-07,3;UBERON:0004782,7.28e-07,3;UBERON:0003281,7.28e-07,3;UBERON:0009664,7.28e-07,3;UBERON:0002296,7.28e-07,3;UBERON:0005602,7.28e-07,3;UBERON:0001179,7.28e-07,3;UBERON:0006293,7.28e-07,3;UBERON:0001280,9.12e-07,3;UBERON:0004647,9.12e-07,3;UBERON:0005171,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40453741329035,0,0,0,1.75849285861836,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,1.25660702173681,0,0,0,0,0,0,0,0.676786981851542,1.76456280885966,2.3495022176618,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52698809106748,0,0.39961921916426,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29864658627337,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,2.41167717140561,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40453741329035,0,0,0,1.75849285861836,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,1.25660702173681,0,0,0,0,0,0,0,0.676786981851542,1.76456280885966,2.3495022176618,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52698809106748,0,0.39961921916426,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29864658627337,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,2.41167717140561,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:190478670..190478674,+ | |short_description=p@chr4:190478670..190478674,+ | ||
}} | }} |
Latest revision as of 04:13, 30 July 2015
Short description: | p@chr4:190478670..190478674, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:190478670..190478674, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.98e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.03e-17 | 1 |
acinus | 1.03e-17 | 1 |
intrahepatic bile duct | 1.03e-17 | 1 |
portal lobule | 1.03e-17 | 1 |
hepatic acinus | 1.03e-17 | 1 |
maxillary sinus | 1.44e-17 | 1 |
paranasal sinus | 1.44e-17 | 1 |
biliary system | 2.29e-08 | 9 |
biliary tree | 2.29e-08 | 9 |
biliary bud | 2.29e-08 | 9 |
gallbladder | 5.80e-07 | 3 |
gall bladder primordium | 5.80e-07 | 3 |
spleen | 7.28e-07 | 3 |
gastrointestinal system mesentery | 7.28e-07 | 3 |
stomach region | 7.28e-07 | 3 |
mesentery | 7.28e-07 | 3 |
gastrointestinal system serosa | 7.28e-07 | 3 |
mesentery of stomach | 7.28e-07 | 3 |
gut mesentery | 7.28e-07 | 3 |
dorsal mesentery | 7.28e-07 | 3 |
dorsal mesogastrium | 7.28e-07 | 3 |
peritoneal cavity | 7.28e-07 | 3 |
spleen primordium | 7.28e-07 | 3 |
liver parenchyma | 9.12e-07 | 3 |
liver lobule | 9.12e-07 | 3 |
hepatic duct | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.44e-17 | 1 |
maxillary sinus cancer | 1.44e-17 | 1 |
chronic leukemia | 2.77e-09 | 8 |
myeloid leukemia | 6.60e-09 | 31 |
hematologic cancer | 3.34e-08 | 51 |
immune system cancer | 3.34e-08 | 51 |
cancer | 1.43e-07 | 235 |
disease of cellular proliferation | 2.15e-07 | 239 |
leukemia | 3.95e-07 | 39 |