FFCP PHASE1:Hg19::chr15:39889397..39889411,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:39889397..39889411,+
|short_description=p4@BC015134
|description=CAGE_peak_4_at_BC015134_5end
|association_with_transcript=-368bp_to_BC015134_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-368bp_to_BC015134_5end | |||
|cluster_id=chr15:39889397..39889411,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_4_at_BC015134_5end | |||
|id=chr15:39889397..39889411,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.02e-11!180;CL:0000057!2.38e-11!75;CL:0002139!5.78e-11!24;CL:0000115!7.31e-09!35;CL:0000071!1.18e-08!18;CL:0002546!1.18e-08!18;CL:0000222!1.71e-08!119;CL:0002078!2.53e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.82e-14;24!CL:0000071;9.05e-12;18!CL:0000115;3.74e-09;36!CL:1000413;1.42e-08;9!CL:0002620;1.72e-08;23!CL:0002544;5.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.72e-15,24;CL:0000057,3.31e-13,76;CL:0000071,5.82e-12,18;CL:0002546,5.82e-12,18;CL:0000115,8.37e-11,36;CL:0002078,5.30e-09,45;CL:1000413,8.65e-09,9;CL:0002620,1.28e-08,23;CL:0000136,1.97e-07,15;CL:0002544,2.93e-07,6;CL:0000222,5.43e-07,121;CL:0000359,7.79e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;9.05e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.01e-15!69;UBERON:0004872!4.28e-15!84;UBERON:0002049!1.03e-14!79;UBERON:0007798!1.03e-14!79;UBERON:0001981!4.67e-14!60;UBERON:0007500!4.67e-14!60;UBERON:0004537!4.67e-14!60;UBERON:0006965!4.67e-14!60;UBERON:0000468!1.62e-11!659;UBERON:0003914!2.66e-11!118;UBERON:0001637!5.51e-11!42;UBERON:0003509!5.51e-11!42;UBERON:0004572!5.51e-11!42;UBERON:0000480!7.13e-11!626;UBERON:0001009!1.08e-10!113;UBERON:0000467!1.22e-10!625;UBERON:0004535!1.50e-10!110;UBERON:0004573!6.07e-09!33;UBERON:0004571!6.07e-09!33;UBERON:0001986!1.18e-08!18;UBERON:0004638!1.18e-08!18;UBERON:0004852!1.18e-08!18;UBERON:0000947!1.37e-07!21;UBERON:0010191!1.37e-07!21;UBERON:0000490!1.90e-07!138;UBERON:0002100!5.16e-07!216;UBERON:0000487!5.78e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.02e-13;42!UBERON:0003509;5.02e-13;42!UBERON:0004572;5.02e-13;42!UBERON:0004638;9.05e-12;18!UBERON:0001986;9.05e-12;18!UBERON:0004852;9.05e-12;18!UBERON:0004573;1.21e-11;33!UBERON:0004571;1.21e-11;33!UBERON:0000947;5.87e-10;21!UBERON:0010191;5.87e-10;21!UBERON:0007500;7.29e-10;56!UBERON:0001981;7.29e-10;56!UBERON:0004537;7.29e-10;56!UBERON:0000055;4.23e-09;65!UBERON:0000487;8.88e-09;22!UBERON:0003915;1.42e-08;9!UBERON:0004700;1.42e-08;9!UBERON:0001917;1.42e-08;9!UBERON:0003688;3.45e-08;6!UBERON:0002358;3.45e-08;6!UBERON:0003684;3.45e-08;6!UBERON:0001178;3.45e-08;6!UBERON:0006914;3.38e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.41e-19,68;UBERON:0007500,2.48e-18,59;UBERON:0001981,2.48e-18,59;UBERON:0004537,2.48e-18,59;UBERON:0006965,2.48e-18,59;UBERON:0004872,4.07e-16,83;UBERON:0002049,4.49e-16,78;UBERON:0007798,4.49e-16,78;UBERON:0001637,1.98e-15,42;UBERON:0003509,1.98e-15,42;UBERON:0004572,1.98e-15,42;UBERON:0004573,8.86e-13,33;UBERON:0004571,8.86e-13,33;UBERON:0004638,5.82e-12,18;UBERON:0001986,5.82e-12,18;UBERON:0004852,5.82e-12,18;UBERON:0003914,9.91e-12,117;UBERON:0001009,1.48e-11,112;UBERON:0004535,1.49e-11,109;UBERON:0000947,2.86e-10,21;UBERON:0010191,2.86e-10,21;UBERON:0000487,6.31e-09,22;UBERON:0003915,8.65e-09,9;UBERON:0004700,8.65e-09,9;UBERON:0001917,8.65e-09,9;UBERON:0003081,3.20e-08,203;UBERON:0003688,3.77e-08,6;UBERON:0002358,3.77e-08,6;UBERON:0003684,3.77e-08,6;UBERON:0001178,3.77e-08,6;UBERON:0006914,2.53e-07,25;UBERON:0002199,2.97e-07,46;UBERON:0002416,2.97e-07,46;UBERON:0002097,3.74e-07,41 | |||
|phase1_expression=8.53888382571616,2.5692062866918,4.65149533516705,7.00513088471913,8.49226079411847,9.59572376510406,5.06599756336621,0,0,0.245733936501509,0.697801167972428,1.96597234917155,0.791300934685361,0.247532705920093,1.65698687863958,3.36162573225888,4.82155622419182,3.65155045193687,9.27072317701963,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,1.39334510984468,1.83884244895785,0.90361775633475,0.739508020333575,0,0,0,0,1.00272223735071,0,0,0,0.257575567634187,0.581592955118259,0,0,3.25400651667958,0,0,3.45230870786581,0.256160706529101,0,5.86067657252252,0,0,1.31769637679823,0,0.224723484445085,4.89734227793444,0.641858054152187,1.27867425159808,0.989553900560148,0.797854630486527,0,4.93355705668593,3.97169657283798,1.24564449799115,4.01997864410789,1.5644487552606,0.217188844705117,3.02699751316684,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,1.2786256184353,0.722878304769133,2.50668955317945,0.869079113764942,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0,0,0.741568885568859,0,0,0,0,0,0,1.59009925893364,1.72046919021225,6.94281003215189,7.34900324501212,1.67799774483962,1.37559020970034,1.04497483268405,1.55050055501597,1.06729878806013,0.33472061276467,1.61131726843659,3.04108842287405,2.19655851793353,4.41195696415042,7.29127753093584,1.3394959242612,2.2452937262617,2.25222960966644,0,0.949265659568129,2.74802615895611,0,0,0.872188104285069,28.3274012466332,1.64619665163954,3.17782033951725,1.43418310374407,0.709336764396714,1.12135520028461,1.06748995729705,3.7000132262574,0,0.269421344139376,0.980771418680752,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0,0,0.140450806702248,0.816616685019573,0,0.103325781175765,5.94001428641027,5.43987244412825,0,0,0,0.125118519871964,0.554128230968366,10.5354629011401,8.88814607817157,10.065949946742,1.02088964844019,5.91985797773244,3.63047560991565,2.33125091275518,2.70081986475962,1.75189299705346,2.57640540045629,4.09457083929498,3.71307930930786,1.46155507741798,2.52433774244115,3.68199594569197,1.2931684545505,3.19508633264953,1.5112814734146,3.05209066158878,1.35282597214308,2.45471508531751,1.14721838155602,0,0,0,0,0,0,4.69348596989448,3.21620469096443,0,1.85747171212792,0,0.236613600079688,0.674338760312407,0.482022059766964,0.441175890929576,0.653638332277218,0.949082476444386,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,1.20725313949488,1.1240175325762,0.603173834469785,0.370353780634118,0,1.03993478527958,0,0,0.587043471179108,1.73239737313289,6.01881166349594,3.80508304469197,0,0,0,0,0,0.93733833986777,2.35174979478403,1.41775097242386,1.34337784054272,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.16344544182,0,0,2.39344304926383,2.08014873822732,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0,0,2.15662369942424,0,1.42636905040718,0.868687840005475,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,1.50051156317903,0,18.0934649531802,26.4074903419799,19.5550994642079,30.8081921430836,2.10662269809403,6.82222512167955,0,0.664225598535437,0.553107505625109,1.12948698808508,0,0,0.206768026122887,0.215714200818617,0,0.606255142892519,1.66435439510497,0.907170879989041,2.23297027036899,15.6531212753824,3.36792113319688,3.58789617915963,5.11707249066703,17.211369562366,8.90508398669946,0.154209693802656,1.24293207719189,0.410635780069046,0.519254429183621,0.813472649219715,0,0.200506470303285,0.0920809889358963,0.34444334449382,0,0.262248829918848,0,0,0,0,0.211103257785751,1.13733384070897,0.850468526382578,9.71621622459627,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0,0.328014645699706,0.325378394664303,0.412164046590889,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.322260734604821,0,0.170453254832202,0.178064071293475,0.330569830721956,1.34533047155574,1.14851441245126,0,0,1.88887408098384,1.3940745403212,0,1.06461206063404,0,1.48259375283136,2.00374841438788,0,1.2655176988749,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.404364963146632,1.58510321173008,2.94880919367287,0,0,2.11300293513511,0.682499557039929,0.565621727814851,0,1.10273068709225,3.3171948762061,1.31535265576129,0.578775534266688,0,1.82619339266434,2.478587984798,1.12678241012897,0,0.589494246078727,0.7133421029625,0,0.633322905892992,0,0.379473173765715,0,0.48111056362756,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0.443430153536676,2.52695740227655,0,0,0,0,0,0,0,0,0,25.9869560921107,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,5.25237866422918,1.78178808499583,7.98617825458003,0,0,0.3339261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| ||
|short_description=p4@BC015134 | |||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p4@BC015134 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BC015134_5end |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | -368bp_to_BC015134_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.72e-15 | 24 |
fibroblast | 3.31e-13 | 76 |
blood vessel endothelial cell | 5.82e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.82e-12 | 18 |
endothelial cell | 8.37e-11 | 36 |
meso-epithelial cell | 5.30e-09 | 45 |
endothelial cell of artery | 8.65e-09 | 9 |
skin fibroblast | 1.28e-08 | 23 |
fat cell | 1.97e-07 | 15 |
aortic endothelial cell | 2.93e-07 | 6 |
mesodermal cell | 5.43e-07 | 121 |
vascular associated smooth muscle cell | 7.79e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.41e-19 | 68 |
epithelial tube open at both ends | 2.48e-18 | 59 |
blood vessel | 2.48e-18 | 59 |
blood vasculature | 2.48e-18 | 59 |
vascular cord | 2.48e-18 | 59 |
splanchnic layer of lateral plate mesoderm | 4.07e-16 | 83 |
vasculature | 4.49e-16 | 78 |
vascular system | 4.49e-16 | 78 |
artery | 1.98e-15 | 42 |
arterial blood vessel | 1.98e-15 | 42 |
arterial system | 1.98e-15 | 42 |
systemic artery | 8.86e-13 | 33 |
systemic arterial system | 8.86e-13 | 33 |
blood vessel endothelium | 5.82e-12 | 18 |
endothelium | 5.82e-12 | 18 |
cardiovascular system endothelium | 5.82e-12 | 18 |
epithelial tube | 9.91e-12 | 117 |
circulatory system | 1.48e-11 | 112 |
cardiovascular system | 1.49e-11 | 109 |
aorta | 2.86e-10 | 21 |
aortic system | 2.86e-10 | 21 |
simple squamous epithelium | 6.31e-09 | 22 |
endothelial tube | 8.65e-09 | 9 |
arterial system endothelium | 8.65e-09 | 9 |
endothelium of artery | 8.65e-09 | 9 |
lateral plate mesoderm | 3.20e-08 | 203 |
omentum | 3.77e-08 | 6 |
peritoneum | 3.77e-08 | 6 |
abdominal cavity | 3.77e-08 | 6 |
visceral peritoneum | 3.77e-08 | 6 |
squamous epithelium | 2.53e-07 | 25 |
integument | 2.97e-07 | 46 |
integumental system | 2.97e-07 | 46 |
skin of body | 3.74e-07 | 41 |