FFCP PHASE1:Hg19::chr3:39851170..39851195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25924 | |EntrezGene=25924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19156 | |HGNC=19156 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAI8 | |UniProt=G3XAI8 | ||
|association_with_transcript=-1bp_to_ENST00000425621_5end | |association_with_transcript=-1bp_to_ENST00000425621_5end | ||
|cluster_id=chr3:39851170..39851195,+ | |||
|coexpression_cluster_id=C2739 | |||
|description=CAGE_peak_3_at_MYRIP_5end | |description=CAGE_peak_3_at_MYRIP_5end | ||
|id=chr3:39851170..39851195,+ | |id=chr3:39851170..39851195,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.10e-14!24;CL:0000115!6.51e-12!35;CL:0000071!2.50e-10!18;CL:0002546!2.50e-10!18;CL:0002078!5.87e-08!44 | |ontology_enrichment_celltype=CL:0002139!2.10e-14!24;CL:0000115!6.51e-12!35;CL:0000071!2.50e-10!18;CL:0002546!2.50e-10!18;CL:0002078!5.87e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.41e-09;24!CL:0000071;3.84e-07;18!CL:0002618;7.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.11e-09,24;CL:0000071,3.46e-07,18;CL:0002546,3.46e-07,18;CL:0002618,5.92e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.31e-16;82!UBERON:0006215;6.89e-08;3!CL:0002546;3.84e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.59e-64!115;UBERON:0001049!1.24e-37!57;UBERON:0005068!1.24e-37!57;UBERON:0006241!1.24e-37!57;UBERON:0007135!1.24e-37!57;UBERON:0002616!9.13e-31!59;UBERON:0001017!5.63e-30!82;UBERON:0002780!8.40e-30!41;UBERON:0001890!8.40e-30!41;UBERON:0006240!8.40e-30!41;UBERON:0000073!9.53e-30!94;UBERON:0001016!9.53e-30!94;UBERON:0005743!3.53e-29!86;UBERON:0003080!9.14e-29!42;UBERON:0001893!1.20e-27!34;UBERON:0002020!1.36e-27!34;UBERON:0003528!1.36e-27!34;UBERON:0000955!2.08e-27!69;UBERON:0006238!2.08e-27!69;UBERON:0002791!1.49e-26!33;UBERON:0003075!1.79e-26!86;UBERON:0007284!1.79e-26!86;UBERON:0001869!9.01e-26!32;UBERON:0002346!2.07e-24!90;UBERON:0004111!4.63e-24!241;UBERON:0002619!1.38e-23!22;UBERON:0000025!4.61e-22!194;UBERON:0000477!4.88e-22!286;UBERON:0001950!1.28e-21!20;UBERON:0000956!8.17e-20!25;UBERON:0000203!8.17e-20!25;UBERON:0003056!6.48e-19!61;UBERON:0000153!5.16e-16!129;UBERON:0007811!5.16e-16!129;UBERON:0000033!7.04e-15!123;UBERON:0004121!8.85e-15!169;UBERON:0000924!6.15e-14!173;UBERON:0006601!6.15e-14!173;UBERON:0000483!1.00e-12!309;UBERON:0000119!2.56e-12!312;UBERON:0001986!2.50e-10!18;UBERON:0004638!2.50e-10!18;UBERON:0004852!2.50e-10!18;UBERON:0000467!4.66e-10!625;UBERON:0000480!5.77e-10!626;UBERON:0003076!7.40e-10!15;UBERON:0003057!7.40e-10!15;UBERON:0002308!3.05e-09!9;UBERON:0000125!3.05e-09!9;UBERON:0000468!3.31e-09!659;UBERON:0002420!4.52e-09!9;UBERON:0007245!4.52e-09!9;UBERON:0010009!4.52e-09!9;UBERON:0010011!4.52e-09!9;UBERON:0000454!4.52e-09!9;UBERON:0000922!1.09e-08!612;UBERON:0001871!1.15e-08!7;UBERON:0004732!1.37e-08!13;UBERON:0002050!3.34e-08!605;UBERON:0005423!3.34e-08!605;UBERON:0000200!6.53e-08!6;UBERON:0000923!6.85e-08!604;UBERON:0005291!6.85e-08!604;UBERON:0006598!6.85e-08!604;UBERON:0002532!6.85e-08!604;UBERON:0004733!1.17e-07!12;UBERON:0002028!1.17e-07!12;UBERON:0007277!1.17e-07!12;UBERON:0000487!1.23e-07!22;UBERON:0002298!2.13e-07!8;UBERON:0009663!2.67e-07!7;UBERON:0000481!8.63e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.16e-33;22!UBERON:0002780;5.04e-32;41!UBERON:0001890;5.04e-32;41!UBERON:0000073;3.12e-31;53!UBERON:0002616;3.12e-31;53!UBERON:0003528;1.01e-30;34!UBERON:0002020;1.01e-30;34!UBERON:0001869;1.74e-30;32!UBERON:0001893;2.18e-30;34!UBERON:0002791;9.67e-30;32!UBERON:0001950;2.71e-29;20!UBERON:0000956;2.56e-28;25!UBERON:0000203;2.56e-28;25!UBERON:0001017;3.00e-18;75!UBERON:0001016;3.06e-18;83!UBERON:0000955;2.54e-17;68!UBERON:0004732;1.87e-15;13!UBERON:0007023;1.80e-14;114!UBERON:0004733;8.77e-14;12!UBERON:0002028;8.77e-14;12!UBERON:0002298;6.81e-13;6!UBERON:0000200;7.48e-13;6!UBERON:0002021;6.38e-11;5!UBERON:0000125;3.93e-10;9!UBERON:0002308;3.93e-10;9!UBERON:0011216;5.39e-09;132!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0002420;1.35e-07;9!UBERON:0007245;1.35e-07;9!UBERON:0010009;1.35e-07;9!UBERON:0010011;1.35e-07;9!UBERON:0000454;1.35e-07;9!UBERON:0001871;1.42e-07;6!UBERON:0001870;2.57e-07;3!UBERON:0000349;2.82e-07;5!UBERON:0000988;2.83e-07;3!UBERON:0001896;2.83e-07;3!UBERON:0005290;2.83e-07;3!UBERON:0001872;3.32e-07;5!UBERON:0004638;3.84e-07;18!UBERON:0001986;3.84e-07;18!UBERON:0004852;3.84e-07;18!UBERON:0009663;6.55e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.04e-57,56;UBERON:0005068,3.04e-57,56;UBERON:0006241,3.04e-57,56;UBERON:0007135,3.04e-57,56;UBERON:0000073,1.73e-55,53;UBERON:0002616,1.73e-55,53;UBERON:0007023,1.70e-49,114;UBERON:0001016,9.23e-48,89;UBERON:0001017,2.93e-45,81;UBERON:0000955,2.04e-44,68;UBERON:0006238,2.04e-44,68;UBERON:0002780,1.80e-42,41;UBERON:0001890,1.80e-42,41;UBERON:0003080,1.80e-42,41;UBERON:0006240,1.80e-42,41;UBERON:0003075,1.89e-39,82;UBERON:0007284,1.89e-39,82;UBERON:0001893,2.57e-37,34;UBERON:0003528,3.15e-37,34;UBERON:0002020,3.15e-37,34;UBERON:0002346,5.20e-37,86;UBERON:0001869,4.91e-34,32;UBERON:0002791,8.51e-34,32;UBERON:0002619,4.78e-33,22;UBERON:0003056,8.81e-30,61;UBERON:0001950,1.65e-29,20;UBERON:0011216,4.98e-29,223;UBERON:0000956,1.61e-28,25;UBERON:0000203,1.61e-28,25;UBERON:0010371,2.29e-28,104;UBERON:0004121,4.52e-24,171;UBERON:0000924,4.52e-24,171;UBERON:0006601,4.52e-24,171;UBERON:0010314,2.80e-23,132;UBERON:0000025,3.29e-23,192;UBERON:0004111,8.18e-22,240;UBERON:0004732,1.61e-15,13;UBERON:0003076,2.46e-15,15;UBERON:0003057,2.46e-15,15;UBERON:0004733,8.60e-14,12;UBERON:0002028,8.60e-14,12;UBERON:0007277,8.60e-14,12;UBERON:0000200,3.74e-13,6;UBERON:0002298,5.70e-13,6;UBERON:0002021,5.50e-11,5;UBERON:0000483,4.00e-10,306;UBERON:0000125,4.67e-10,9;UBERON:0002308,4.67e-10,9;UBERON:0000119,7.00e-10,309;UBERON:0002680,1.16e-08,9;UBERON:0001895,1.16e-08,9;UBERON:0010092,1.16e-08,9;UBERON:0000923,1.49e-07,560;UBERON:0010316,1.49e-07,560;UBERON:0005291,1.49e-07,560;UBERON:0006598,1.49e-07,560;UBERON:0010317,1.49e-07,560;UBERON:0002532,1.49e-07,560;UBERON:0001871,1.60e-07,6;UBERON:0002420,1.69e-07,9;UBERON:0007245,1.69e-07,9;UBERON:0010009,1.69e-07,9;UBERON:0010011,1.69e-07,9;UBERON:0000454,1.69e-07,9;UBERON:0001870,1.94e-07,3;UBERON:0002050,2.34e-07,564;UBERON:0000988,2.56e-07,3;UBERON:0001896,2.61e-07,3;UBERON:0005290,2.61e-07,3;UBERON:0010096,2.61e-07,3;UBERON:0001872,2.83e-07,5;UBERON:0000349,3.08e-07,5;UBERON:0004638,3.46e-07,18;UBERON:0001986,3.46e-07,18;UBERON:0004852,3.46e-07,18;UBERON:0009663,8.05e-07,7 | |||
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| ||
|short_description=p3@MYRIP | |short_description=p3@MYRIP | ||
}} | }} |
Latest revision as of 04:31, 18 September 2015
Short description: | p3@MYRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYRIP_5end |
Coexpression cluster: | C2739_retina_cerebellum_Hepatocyte_salivary_submaxillary_parotid_small |
Association with transcript: | -1bp_to_ENST00000425621_5end |
EntrezGene: | MYRIP |
HGNC: | 19156 |
UniProt: | G3XAI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.11e-09 | 24 |
blood vessel endothelial cell | 3.46e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.46e-07 | 18 |
endothelial cell of umbilical vein | 5.92e-07 | 3 |