FFCP PHASE1:Hg19::chr14:95081268..95081276,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:95081268..95081276,+
|short_description=p20@SERPINA3
|description=CAGE_peak_20_at_SERPINA3_5end
|association_with_transcript=426bp_to_J05176_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=426bp_to_J05176_5end | |||
|cluster_id=chr14:95081268..95081276,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_20_at_SERPINA3_5end | |||
|id=chr14:95081268..95081276,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.98e-12!12;CL:0000417!3.98e-12!12;CL:0000668!3.98e-12!12;CL:0000414!3.98e-12!12;CL:0000412!3.98e-12!12;CL:0000182!3.98e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.00e-19;12!CL:0000746;1.74e-09;3!CL:0000737;1.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-19,12;CL:0000746,1.81e-09,3;CL:0000513,1.81e-09,3;CL:0000737,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.17e-10;11!CL:0000513;1.74e-09;3!UBERON:0009497;1.29e-08;13 | |||
|ontology_enrichment_disease=DOID:114!3.38e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.77e-13!19;UBERON:0006925!3.77e-13!19;UBERON:0008836!3.77e-13!19;UBERON:0007023!6.47e-13!115;UBERON:0008835!3.60e-11!22;UBERON:0003894!3.60e-11!22;UBERON:0000949!6.66e-11!45;UBERON:0009854!1.26e-10!23;UBERON:0007499!1.15e-09!25;UBERON:0009497!1.15e-09!25;UBERON:0000015!1.15e-09!25;UBERON:0002423!1.15e-09!25;UBERON:0006235!1.15e-09!25;UBERON:0004161!1.15e-09!25;UBERON:0005057!3.05e-09!26;UBERON:0009856!3.05e-09!26;UBERON:0005174!3.95e-08!5;UBERON:0001137!3.95e-08!5;UBERON:0002368!4.04e-08!35;UBERON:0002365!1.55e-07!31;UBERON:0002330!1.55e-07!31;UBERON:0005177!2.33e-07!107;UBERON:0003929!4.29e-07!54;UBERON:0000475!6.13e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.84e-33;19!UBERON:0006925;6.84e-33;19!UBERON:0002423;4.18e-25;25!UBERON:0002365;2.88e-20;31!UBERON:0002330;2.88e-20;31!UBERON:0002368;1.56e-17;33!UBERON:0000949;1.04e-16;43!UBERON:0005172;3.28e-09;52!UBERON:0005173;3.28e-09;52!UBERON:0002417;3.73e-07;58!UBERON:0000916;3.73e-07;58!UBERON:0002530;9.31e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0000949,5.65e-20,45;UBERON:0002368,4.75e-18,35;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0005177,5.79e-09,101;UBERON:0005911,7.71e-08,82;UBERON:0003914,9.83e-08,117;UBERON:0005256,2.04e-07,122;UBERON:0001041,2.13e-07,87 | |||
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| ||
|short_description=p20@SERPINA3 | |||
}} | }} |
Latest revision as of 18:54, 16 September 2015
Short description: | p20@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 426bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-19 | 12 |
cardiac muscle cell | 1.81e-09 | 3 |
cardiac muscle myoblast | 1.81e-09 | 3 |
striated muscle cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine system | 5.65e-20 | 45 |
endocrine gland | 4.75e-18 | 35 |
gut epithelium | 8.40e-12 | 54 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
trunk region element | 5.79e-09 | 101 |
endo-epithelium | 7.71e-08 | 82 |
epithelial tube | 9.83e-08 | 117 |
trunk mesenchyme | 2.04e-07 | 122 |
foregut | 2.13e-07 | 87 |