FFCP PHASE1:Hg19::chr3:133748943..133748955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6578 | |EntrezGene=6578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10955 | |HGNC=10955 | ||
|TSSclassifier=strong | |||
|UniProt=Q92959 | |UniProt=Q92959 | ||
|association_with_transcript=-23bp_to_ENST00000310926,NM_005630,uc003eqa.3,uc003eqb.3,uc010htw.1,uc011blv.1_5end | |association_with_transcript=-23bp_to_ENST00000310926,NM_005630,uc003eqa.3,uc003eqb.3,uc010htw.1,uc011blv.1_5end | ||
|cluster_id=chr3:133748943..133748955,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_3_at_SLCO2A1_5end | |description=CAGE_peak_3_at_SLCO2A1_5end | ||
|id=chr3:133748943..133748955,- | |id=chr3:133748943..133748955,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002188;5.51e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.31e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.92e-09;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-26!115;UBERON:0000468!2.03e-10!659;UBERON:0000477!2.45e-10!286;UBERON:0003103!1.26e-09!69;UBERON:0000481!2.11e-09!347;UBERON:0000153!3.33e-09!129;UBERON:0007811!3.33e-09!129;UBERON:0000467!4.27e-09!625;UBERON:0000480!5.28e-09!626;UBERON:0004111!3.40e-08!241;UBERON:0000033!3.63e-08!123;UBERON:0000062!1.14e-07!511;UBERON:0000475!1.19e-07!365;UBERON:0000064!3.36e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;5.58e-09;2!UBERON:0002133;5.58e-09;2!UBERON:0006947;9.38e-07;3!UBERON:0004054;9.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-12,114;UBERON:0003887,4.74e-12,12;UBERON:0002133,3.62e-09,2;UBERON:0004876,3.87e-09,11;UBERON:0002081,4.60e-09,2;UBERON:0010227,4.60e-09,2;UBERON:0000080,1.51e-07,9;UBERON:0002120,1.51e-07,9;UBERON:0004875,1.51e-07,9;UBERON:0005721,1.51e-07,9;UBERON:0005754,1.51e-07,9;UBERON:0007297,1.51e-07,9;UBERON:0000058,3.18e-07,19;UBERON:0005172,7.91e-07,54;UBERON:0005173,7.91e-07,54;UBERON:0006947,9.43e-07,3;UBERON:0004054,9.43e-07,3 | |||
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| ||
|short_description=p3@SLCO2A1 | |short_description=p3@SLCO2A1 | ||
}} | }} |
Latest revision as of 22:11, 24 September 2015
Short description: | p3@SLCO2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLCO2A1_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -23bp_to_ENST00000310926, NM_005630, uc003eqa.3, uc003eqb.3, uc010htw.1, uc011blv.1_5end |
EntrezGene: | SLCO2A1 |
HGNC: | 10955 |
UniProt: | Q92959 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.31e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.70e-12 | 114 |
intraembryonic coelom | 4.74e-12 | 12 |
atrioventricular valve | 3.62e-09 | 2 |
urogenital ridge | 3.87e-09 | 11 |
cardiac atrium | 4.60e-09 | 2 |
future cardiac atrium | 4.60e-09 | 2 |
mesonephros | 1.51e-07 | 9 |
pronephros | 1.51e-07 | 9 |
nephrogenic cord | 1.51e-07 | 9 |
pronephric mesoderm | 1.51e-07 | 9 |
rostral part of nephrogenic cord | 1.51e-07 | 9 |
presumptive pronephric mesoderm | 1.51e-07 | 9 |
duct | 3.18e-07 | 19 |
abdomen element | 7.91e-07 | 54 |
abdominal segment element | 7.91e-07 | 54 |
male genital duct | 9.43e-07 | 3 |
internal male genitalia | 9.43e-07 | 3 |