FFCP PHASE1:Hg19::chrX:65382381..65382392,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9843 | |EntrezGene=9843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4866 | |HGNC=4866 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHN8 | |UniProt=E9PHN8 | ||
|association_with_transcript=0bp_to_ENST00000519389_5end | |association_with_transcript=0bp_to_ENST00000519389_5end | ||
|cluster_id=chrX:65382381..65382392,+ | |||
|coexpression_cluster_id=C1723 | |||
|description=CAGE_peak_11_at_HEPH_5end | |description=CAGE_peak_11_at_HEPH_5end | ||
|id=chrX:65382381..65382392,+ | |id=chrX:65382381..65382392,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.87e-08!4 | |ontology_enrichment_celltype=CL:0002563!7.87e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;4.32e-12;4!CL:0002253;9.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.57e-12,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.86e-12;1!UBERON:0001045;3.26e-12;1 | |||
|ontology_enrichment_disease=DOID:1036!3.29e-29!8;DOID:8692!1.81e-19!31;DOID:1240!3.91e-15!39;DOID:2531!3.51e-11!51;DOID:0060083!3.51e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:3493;7.40e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!8.99e-23!27;UBERON:0004907!9.44e-22!5;UBERON:0000059!1.08e-21!11;UBERON:0005409!6.75e-21!35;UBERON:0001052!9.71e-16!4;UBERON:0001155!2.59e-12!9;UBERON:0001046!8.80e-09!19;UBERON:0001154!4.40e-08!1;UBERON:0001153!4.40e-08!1;UBERON:0001242!7.87e-08!4;UBERON:0001262!7.87e-08!4;UBERON:0004786!7.87e-08!4;UBERON:0004808!7.87e-08!4;UBERON:0001277!7.87e-08!4;UBERON:0004921!1.71e-07!129;UBERON:0004185!1.71e-07!129;UBERON:0001007!7.86e-07!155;UBERON:0001555!7.86e-07!155;UBERON:0007026!7.86e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.52e-48;17!UBERON:0005409;8.56e-38;22!UBERON:0000059;9.25e-25;11!UBERON:0004921;1.62e-22;33!UBERON:0002108;7.05e-21;4!UBERON:0004907;3.99e-20;5!UBERON:0001155;9.67e-20;9!UBERON:0001154;3.26e-12;1!UBERON:0001153;3.26e-12;1!UBERON:0009854;3.26e-12;1!UBERON:0001242;4.32e-12;4!UBERON:0001262;4.32e-12;4!UBERON:0004786;4.32e-12;4!UBERON:0004808;4.32e-12;4!UBERON:0001277;4.32e-12;4!UBERON:0001052;7.94e-12;4!UBERON:0001555;4.44e-09;54!UBERON:0001007;2.38e-08;81!UBERON:0000485;2.77e-07;7!UBERON:0003929;2.77e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.29e-48,17;UBERON:0005409,2.25e-33,25;UBERON:0000059,8.37e-25,11;UBERON:0002108,6.82e-21,4;UBERON:0004907,3.62e-20,5;UBERON:0001155,1.04e-19,9;UBERON:0001154,3.45e-12,1;UBERON:0001153,3.45e-12,1;UBERON:0001045,3.45e-12,1;UBERON:0001242,4.57e-12,4;UBERON:0001262,4.57e-12,4;UBERON:0004786,4.57e-12,4;UBERON:0004808,4.57e-12,4;UBERON:0001277,4.57e-12,4;UBERON:0001052,7.12e-12,4;UBERON:0004921,9.35e-10,118;UBERON:0001046,1.56e-09,19;UBERON:0001007,3.07e-09,145;UBERON:0001555,3.07e-09,145;UBERON:0007026,3.07e-09,145;UBERON:0004119,3.25e-08,160;UBERON:0000925,3.25e-08,160;UBERON:0006595,3.25e-08,160 | |||
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|short_description=p11@HEPH | |short_description=p11@HEPH | ||
}} | }} |
Latest revision as of 04:54, 16 September 2015
Short description: | p11@HEPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HEPH_5end |
Coexpression cluster: | C1723_adenocarcinoma_Intestinal_Prostate_rectal_colon_small_duodenum |
Association with transcript: | 0bp_to_ENST00000519389_5end |
EntrezGene: | HEPH |
HGNC: | 4866 |
UniProt: | E9PHN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.57e-12 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.29e-48 | 17 |
gastrointestinal system | 2.25e-33 | 25 |
large intestine | 8.37e-25 | 11 |
small intestine | 6.82e-21 | 4 |
lower digestive tract | 3.62e-20 | 5 |
colon | 1.04e-19 | 9 |
vermiform appendix | 3.45e-12 | 1 |
caecum | 3.45e-12 | 1 |
midgut | 3.45e-12 | 1 |
intestinal mucosa | 4.57e-12 | 4 |
wall of intestine | 4.57e-12 | 4 |
gastrointestinal system mucosa | 4.57e-12 | 4 |
gastrointestinal system epithelium | 4.57e-12 | 4 |
intestinal epithelium | 4.57e-12 | 4 |
rectum | 7.12e-12 | 4 |
subdivision of digestive tract | 9.35e-10 | 118 |
hindgut | 1.56e-09 | 19 |
digestive system | 3.07e-09 | 145 |
digestive tract | 3.07e-09 | 145 |
primitive gut | 3.07e-09 | 145 |
endoderm-derived structure | 3.25e-08 | 160 |
endoderm | 3.25e-08 | 160 |
presumptive endoderm | 3.25e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.20e-07 | 2 |