FFCP PHASE1:Hg19::chr14:89259247..89259263,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:89259247..89259263,-
|short_description=p6@EML5
|description=CAGE_peak_6_at_EML5_5end
|association_with_transcript=-90bp_to_uc001xxg.2_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=161436 | |EntrezGene=161436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18197 | |HGNC=18197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-90bp_to_uc001xxg.2_5end | |||
|cluster_id=chr14:89259247..89259263,- | |||
|coexpression_cluster_id=C2320 | |||
|description=CAGE_peak_6_at_EML5_5end | |||
|id=chr14:89259247..89259263,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.29e-23;5!CL:0002321;2.92e-08;15!CL:0002535;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.03e-17;3!UBERON:0006215;1.94e-17;3!UBERON:0005425;1.04e-13;1!UBERON:0006601;2.37e-08;82!UBERON:0010122;1.70e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.55e-20;6!DOID:4960;1.04e-13;1!DOID:0070004;1.04e-13;1!DOID:171;3.99e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.04e-20,6;DOID:4960,7.55e-14,1;DOID:0070004,7.55e-14,1;DOID:171,3.85e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.35e-31!57;UBERON:0005068!6.35e-31!57;UBERON:0006241!6.35e-31!57;UBERON:0007135!6.35e-31!57;UBERON:0002616!2.14e-29!59;UBERON:0002780!3.21e-29!41;UBERON:0001890!3.21e-29!41;UBERON:0006240!3.21e-29!41;UBERON:0003080!2.94e-28!42;UBERON:0000955!7.90e-27!69;UBERON:0006238!7.90e-27!69;UBERON:0000073!2.03e-26!94;UBERON:0001016!2.03e-26!94;UBERON:0007023!1.58e-25!115;UBERON:0005743!1.27e-24!86;UBERON:0003075!1.35e-24!86;UBERON:0007284!1.35e-24!86;UBERON:0001017!5.73e-24!82;UBERON:0002346!7.06e-24!90;UBERON:0002020!1.37e-23!34;UBERON:0003528!1.37e-23!34;UBERON:0001869!2.33e-23!32;UBERON:0002619!2.75e-23!22;UBERON:0001893!4.20e-23!34;UBERON:0003056!2.41e-22!61;UBERON:0002791!3.91e-22!33;UBERON:0001950!1.07e-20!20;UBERON:0000956!9.84e-20!25;UBERON:0000203!9.84e-20!25;UBERON:0000153!3.52e-16!129;UBERON:0007811!3.52e-16!129;UBERON:0000033!2.19e-15!123;UBERON:0004121!2.21e-13!169;UBERON:0000924!2.83e-13!173;UBERON:0006601!2.83e-13!173;UBERON:0000200!4.41e-08!6;UBERON:0002021!8.81e-08!5;UBERON:0004732!1.19e-07!13;UBERON:0001894!1.24e-07!7;UBERON:0006222!1.24e-07!7;UBERON:0000064!2.12e-07!219;UBERON:0001872!3.31e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.29e-23;5!UBERON:0002410;1.29e-23;5!UBERON:0000010;8.59e-23;8!UBERON:0000941;1.04e-13;1!UBERON:0001785;1.04e-13;1!UBERON:0002464;1.04e-13;1!UBERON:0004904;1.04e-13;1!UBERON:0001021;1.04e-13;1!UBERON:0001016;2.38e-11;83!UBERON:0001872;7.50e-11;5!UBERON:0000073;3.03e-10;53!UBERON:0002616;3.03e-10;53!UBERON:0002780;5.33e-10;41!UBERON:0001890;5.33e-10;41!UBERON:0001950;1.11e-09;20!UBERON:0001869;3.11e-09;32!UBERON:0002037;3.41e-09;6!UBERON:0004732;3.76e-09;13!UBERON:0001893;6.85e-09;34!UBERON:0002619;7.35e-09;22!UBERON:0002791;1.51e-08;32!UBERON:0003528;3.31e-08;34!UBERON:0002020;3.31e-08;34!UBERON:0000956;7.34e-08;25!UBERON:0000203;7.34e-08;25!UBERON:0001876;1.70e-07;2!UBERON:0000007;1.70e-07;2!UBERON:0001873;1.70e-07;2!UBERON:0003714;1.70e-07;2!UBERON:0005162;1.70e-07;2!UBERON:0000122;1.70e-07;2!UBERON:0006955;1.70e-07;2!UBERON:0004801;1.70e-07;2!UBERON:0000955;5.50e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.20e-23,5;UBERON:0002410,1.20e-23,5;UBERON:0000010,8.37e-23,8;UBERON:0001016,2.51e-21,89;UBERON:0000073,7.28e-14,53;UBERON:0002616,7.28e-14,53;UBERON:0003075,9.70e-14,82;UBERON:0007284,9.70e-14,82;UBERON:0000941,1.10e-13,1;UBERON:0001785,1.10e-13,1;UBERON:0002464,1.10e-13,1;UBERON:0004904,1.10e-13,1;UBERON:0001021,1.10e-13,1;UBERON:0003902,1.10e-13,1;UBERON:0005425,1.10e-13,1;UBERON:0000955,2.40e-13,68;UBERON:0006238,2.40e-13,68;UBERON:0001049,4.29e-13,56;UBERON:0005068,4.29e-13,56;UBERON:0006241,4.29e-13,56;UBERON:0007135,4.29e-13,56;UBERON:0002346,4.71e-13,86;UBERON:0003056,5.75e-12,61;UBERON:0001017,4.26e-11,81;UBERON:0001872,8.29e-11,5;UBERON:0010371,1.32e-10,104;UBERON:0004121,1.64e-10,171;UBERON:0000924,1.64e-10,171;UBERON:0006601,1.64e-10,171;UBERON:0002780,2.95e-10,41;UBERON:0001890,2.95e-10,41;UBERON:0003080,2.95e-10,41;UBERON:0006240,2.95e-10,41;UBERON:0001950,1.30e-09,20;UBERON:0002037,2.56e-09,6;UBERON:0006215,2.56e-09,6;UBERON:0000966,2.66e-09,6;UBERON:0005388,2.66e-09,6;UBERON:0001802,2.66e-09,6;UBERON:0002791,2.86e-09,32;UBERON:0001869,2.86e-09,32;UBERON:0004732,3.13e-09,13;UBERON:0002619,8.51e-09,22;UBERON:0003528,9.77e-09,34;UBERON:0002020,9.77e-09,34;UBERON:0001893,9.77e-09,34;UBERON:0010314,4.13e-08,132;UBERON:0000956,8.34e-08,25;UBERON:0000203,8.34e-08,25;UBERON:0007023,8.91e-08,114;UBERON:0011216,1.19e-07,223;UBERON:0000007,1.28e-07,2;UBERON:0001873,1.64e-07,2;UBERON:0010122,1.64e-07,2;UBERON:0003714,1.75e-07,2;UBERON:0005162,1.75e-07,2;UBERON:0000122,1.75e-07,2;UBERON:0001876,2.12e-07,2;UBERON:0006955,2.25e-07,2;UBERON:0004801,2.25e-07,2 | |||
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| ||
|short_description=p6@EML5 | |||
}} | }} |
Latest revision as of 11:00, 16 September 2015
Short description: | p6@EML5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EML5_5end |
Coexpression cluster: | C2320_neuroblastoma_cerebellum_retinoblastoma_pituitary_rectum_putamen_pineal |
Association with transcript: | -90bp_to_uc001xxg.2_5end |
EntrezGene: | EML5 |
HGNC: | 18197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.04e-20 | 6 |
bone marrow cancer | 7.55e-14 | 1 |
myeloma | 7.55e-14 | 1 |
neuroectodermal tumor | 3.85e-12 | 10 |