FFCP PHASE1:Hg19::chrX:45630639..45630663,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:45630639..45630663,- | |||
|coexpression_cluster_id=C1616 | |||
|description=CAGE_peak_at_chrX:45630639..45630663,- | |description=CAGE_peak_at_chrX:45630639..45630663,- | ||
|id=chrX:45630639..45630663,- | |id=chrX:45630639..45630663,- | ||
|ontology_enrichment_celltype=CL:0000055!2.35e-29!180;CL:0000057!1.63e-21!75;CL:0000222!1.99e-19!119;CL:0000220!5.28e-17!246;CL:0002371!1.27e-16!591;CL:0002321!2.91e-16!248;CL:0000144!3.53e-15!625;CL:0000548!2.08e-14!679;CL:0000004!2.08e-14!679;CL:0000255!2.08e-14!679;CL:0002620!1.02e-13!23;CL:0000680!1.29e-13!57;CL:0000056!1.29e-13!57;CL:0000355!1.29e-13!57;CL:0000012!1.46e-13!682;CL:0000187!4.43e-12!54;CL:0000183!3.82e-11!59;CL:0000192!6.74e-11!42;CL:0000514!6.74e-11!42;CL:0000393!6.47e-10!60;CL:0000211!6.47e-10!60;CL:0000359!1.57e-08!32;CL:0002139!7.88e-08!24;CL:0000003!1.75e-07!722;CL:0000723!2.22e-07!436;CL:0000048!2.55e-07!430;CL:0000213!3.92e-07!57;CL:0000215!3.92e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.35e-29!180;CL:0000057!1.63e-21!75;CL:0000222!1.99e-19!119;CL:0000220!5.28e-17!246;CL:0002371!1.27e-16!591;CL:0002321!2.91e-16!248;CL:0000144!3.53e-15!625;CL:0000548!2.08e-14!679;CL:0000004!2.08e-14!679;CL:0000255!2.08e-14!679;CL:0002620!1.02e-13!23;CL:0000680!1.29e-13!57;CL:0000056!1.29e-13!57;CL:0000355!1.29e-13!57;CL:0000012!1.46e-13!682;CL:0000187!4.43e-12!54;CL:0000183!3.82e-11!59;CL:0000192!6.74e-11!42;CL:0000514!6.74e-11!42;CL:0000393!6.47e-10!60;CL:0000211!6.47e-10!60;CL:0000359!1.57e-08!32;CL:0002139!7.88e-08!24;CL:0000003!1.75e-07!722;CL:0000723!2.22e-07!436;CL:0000048!2.55e-07!430;CL:0000213!3.92e-07!57;CL:0000215!3.92e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.04e-14;23!CL:0000057;4.49e-09;73!CL:0000192;1.33e-08;43!CL:0000359;1.79e-08;32!CL:0002139;2.00e-08;24!CL:0000187;1.35e-07;55!CL:0000071;4.11e-07;18!CL:0000134;9.17e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.03e-22,76;CL:0000222,2.79e-20,121;CL:0002321,4.51e-17,250;CL:0002620,8.63e-15,23;CL:0000680,4.27e-14,58;CL:0000056,4.27e-14,58;CL:0000355,4.27e-14,58;CL:0000187,1.87e-12,55;CL:0000192,2.78e-11,43;CL:0000514,2.78e-11,43;CL:0000723,3.16e-11,433;CL:0000048,5.04e-11,427;CL:0000393,1.81e-10,61;CL:0000211,1.81e-10,61;CL:0000034,8.93e-10,441;CL:0000359,9.37e-09,32;CL:0002139,2.20e-08,24;CL:0000213,1.11e-07,58;CL:0000215,1.11e-07,58;CL:0000071,3.86e-07,18;CL:0002546,3.86e-07,18;CL:0000115,5.17e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;1.33e-08;43!CL:0000355;6.04e-08;58!CL:0002546;4.11e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.86e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.05e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.40e-18!83;UBERON:0002329!1.40e-18!83;UBERON:0003077!1.40e-18!83;UBERON:0003059!1.40e-18!83;UBERON:0007282!1.40e-18!83;UBERON:0009618!1.40e-18!83;UBERON:0007285!1.40e-18!83;UBERON:0000486!1.22e-17!82;UBERON:0000467!4.29e-16!625;UBERON:0000480!8.39e-16!626;UBERON:0004290!9.39e-16!70;UBERON:0002049!1.62e-15!79;UBERON:0007798!1.62e-15!79;UBERON:0000055!1.57e-14!69;UBERON:0003102!2.85e-14!95;UBERON:0000468!5.63e-14!659;UBERON:0001981!3.33e-13!60;UBERON:0007500!3.33e-13!60;UBERON:0004537!3.33e-13!60;UBERON:0006965!3.33e-13!60;UBERON:0001637!1.56e-12!42;UBERON:0003509!1.56e-12!42;UBERON:0004572!1.56e-12!42;UBERON:0002199!7.99e-12!45;UBERON:0002416!7.99e-12!45;UBERON:0001134!8.35e-12!61;UBERON:0002036!8.35e-12!61;UBERON:0003082!8.35e-12!61;UBERON:0002385!1.12e-11!63;UBERON:0001015!1.12e-11!63;UBERON:0000383!1.12e-11!63;UBERON:0002097!1.83e-11!40;UBERON:0005256!2.07e-11!143;UBERON:0000475!3.17e-11!365;UBERON:0004573!8.34e-11!33;UBERON:0004571!8.34e-11!33;UBERON:0000490!1.05e-10!138;UBERON:0004872!1.53e-10!84;UBERON:0000119!4.71e-10!312;UBERON:0000483!7.71e-10!309;UBERON:0002100!4.95e-09!216;UBERON:0000926!1.44e-08!448;UBERON:0004120!1.44e-08!448;UBERON:0006603!1.44e-08!448;UBERON:0000923!2.04e-08!604;UBERON:0005291!2.04e-08!604;UBERON:0006598!2.04e-08!604;UBERON:0002532!2.04e-08!604;UBERON:0002050!2.38e-08!605;UBERON:0005423!2.38e-08!605;UBERON:0002204!2.55e-08!167;UBERON:0004535!4.19e-08!110;UBERON:0000947!1.36e-07!21;UBERON:0010191!1.36e-07!21;UBERON:0000487!1.57e-07!22;UBERON:0003914!2.05e-07!118;UBERON:0006914!2.60e-07!25;UBERON:0000922!3.94e-07!612;UBERON:0001009!4.27e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.31e-11;33!UBERON:0004571;6.31e-11;33!UBERON:0001637;3.21e-10;42!UBERON:0003509;3.21e-10;42!UBERON:0004572;3.21e-10;42!UBERON:0002097;4.08e-09;41!UBERON:0007500;2.86e-08;56!UBERON:0001981;2.86e-08;56!UBERON:0004537;2.86e-08;56!UBERON:0000947;3.43e-08;21!UBERON:0010191;3.43e-08;21!UBERON:0002199;3.87e-08;46!UBERON:0002416;3.87e-08;46!UBERON:0000487;5.47e-08;22!UBERON:0006914;6.81e-08;25!UBERON:0000055;7.16e-08;65!UBERON:0002049;9.47e-08;75!UBERON:0007798;9.47e-08;75!UBERON:0003102;1.13e-07;50!UBERON:0004638;4.11e-07;18!UBERON:0001986;4.11e-07;18!UBERON:0004852;4.11e-07;18!UBERON:0002385;7.33e-07;31!UBERON:0001015;7.33e-07;31!UBERON:0000383;7.33e-07;31 | |||
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| ||
|short_description=p@chrX:45630639..45630663,- | |short_description=p@chrX:45630639..45630663,- | ||
}} | }} |
Latest revision as of 08:13, 1 August 2015
Short description: | p@chrX:45630639..45630663, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:45630639..45630663, - |
Coexpression cluster: | C1616_Fibroblast_Small_large_Smooth_liposarcoma_Myoblast_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.03e-22 | 76 |
mesodermal cell | 2.79e-20 | 121 |
embryonic cell | 4.51e-17 | 250 |
skin fibroblast | 8.63e-15 | 23 |
muscle precursor cell | 4.27e-14 | 58 |
myoblast | 4.27e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-14 | 58 |
muscle cell | 1.87e-12 | 55 |
smooth muscle cell | 2.78e-11 | 43 |
smooth muscle myoblast | 2.78e-11 | 43 |
somatic stem cell | 3.16e-11 | 433 |
multi fate stem cell | 5.04e-11 | 427 |
electrically responsive cell | 1.81e-10 | 61 |
electrically active cell | 1.81e-10 | 61 |
stem cell | 8.93e-10 | 441 |
vascular associated smooth muscle cell | 9.37e-09 | 32 |
endothelial cell of vascular tree | 2.20e-08 | 24 |
lining cell | 1.11e-07 | 58 |
barrier cell | 1.11e-07 | 58 |
blood vessel endothelial cell | 3.86e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.86e-07 | 18 |
endothelial cell | 5.17e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.05e-07 | 14 |