FFCP PHASE1:Hg19::chr3:114464766..114464816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:114464766..114464816,- | |||
|coexpression_cluster_id=C2079 | |||
|description=CAGE_peak_at_chr3:114464766..114464816,- | |description=CAGE_peak_at_chr3:114464766..114464816,- | ||
|id=chr3:114464766..114464816,- | |id=chr3:114464766..114464816,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.12e-12;12!CL:1000497;7.28e-12;17!CL:0002518;7.28e-12;17!CL:1000507;9.80e-11;10!CL:1000494;9.80e-11;10!CL:1000449;1.16e-08;15!CL:0000239;1.86e-07;3!CL:1000615;1.86e-07;3!CL:0002306;1.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.15e-12,12;CL:1000497,7.61e-12,17;CL:0002518,7.61e-12,17;CL:1000507,1.00e-10,10;CL:1000494,1.00e-10,10;CL:1000449,1.18e-08,15;CL:0000239,1.85e-07,3;CL:1000615,1.85e-07,3;CL:0002306,1.85e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.80e-19;31!UBERON:0009497;2.43e-11;13!UBERON:0004161;1.33e-10;11!UBERON:0001041;1.25e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-13!115;UBERON:0003104!1.91e-11!238;UBERON:0009142!1.91e-11!238;UBERON:0005172!4.35e-11!55;UBERON:0005173!4.35e-11!55;UBERON:0002417!5.62e-11!61;UBERON:0000916!5.62e-11!61;UBERON:0004119!1.86e-10!169;UBERON:0000925!1.86e-10!169;UBERON:0006595!1.86e-10!169;UBERON:0000481!2.42e-10!347;UBERON:0002100!6.03e-10!216;UBERON:0000466!6.75e-10!126;UBERON:0000077!8.98e-10!130;UBERON:0001008!1.83e-09!45;UBERON:0000062!1.85e-09!511;UBERON:0009497!2.49e-09!25;UBERON:0000015!2.49e-09!25;UBERON:0002423!2.49e-09!25;UBERON:0006235!2.49e-09!25;UBERON:0004161!2.49e-09!25;UBERON:0009856!2.76e-09!26;UBERON:0001007!3.03e-09!155;UBERON:0001555!3.03e-09!155;UBERON:0007026!3.03e-09!155;UBERON:0004921!4.38e-09!129;UBERON:0004185!4.38e-09!129;UBERON:0006554!5.28e-09!44;UBERON:0000475!6.60e-09!365;UBERON:0007499!9.95e-09!25;UBERON:0009569!1.13e-08!113;UBERON:0005177!1.27e-08!107;UBERON:0009854!1.34e-08!23;UBERON:0003929!1.93e-08!54;UBERON:0005256!3.35e-08!143;UBERON:0008835!4.86e-08!22;UBERON:0003894!4.86e-08!22;UBERON:0000468!1.03e-07!659;UBERON:0000058!1.24e-07!26;UBERON:0000477!1.36e-07!286;UBERON:0004111!2.07e-07!241;UBERON:0003886!2.74e-07!63;UBERON:0003103!3.57e-07!69;UBERON:0005911!4.97e-07!82;UBERON:0003064!5.29e-07!37;UBERON:0000489!6.25e-07!32;UBERON:0003914!6.95e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.47e-14;25!UBERON:0002107;8.75e-14;19!UBERON:0006925;8.75e-14;19!UBERON:0005172;1.49e-12;52!UBERON:0005173;1.49e-12;52!UBERON:0002113;9.49e-12;24!UBERON:0011143;9.49e-12;24!UBERON:0000489;7.92e-11;29!UBERON:0004211;9.80e-11;10!UBERON:0009773;9.80e-11;10!UBERON:0001231;9.80e-11;10!UBERON:0004810;9.80e-11;10!UBERON:0006554;2.32e-10;30!UBERON:0001008;2.32e-10;30!UBERON:0002417;5.48e-09;58!UBERON:0000916;5.48e-09;58!UBERON:0006555;1.16e-08;15!UBERON:0004819;1.16e-08;15!UBERON:0001285;1.16e-08;15!UBERON:0007684;1.16e-08;15!UBERON:0000058;2.86e-08;10!UBERON:0006947;3.74e-08;3!UBERON:0004054;3.74e-08;3!UBERON:0003978;1.24e-07;3!UBERON:0000946;1.24e-07;3!UBERON:0006853;1.86e-07;3!UBERON:0007685;1.86e-07;3!UBERON:0004134;1.86e-07;3!UBERON:0002365;2.44e-07;31!UBERON:0002330;2.44e-07;31!UBERON:0003101;4.23e-07;22!UBERON:0000079;4.23e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.79e-21,54;UBERON:0005173,1.79e-21,54;UBERON:0002417,1.35e-18,60;UBERON:0000916,1.35e-18,60;UBERON:0005177,4.85e-18,101;UBERON:0008835,1.56e-16,22;UBERON:0003894,1.56e-16,22;UBERON:0007499,2.12e-16,25;UBERON:0003104,1.16e-15,160;UBERON:0009142,1.16e-15,160;UBERON:0009854,1.16e-15,23;UBERON:0009856,1.27e-15,26;UBERON:0002113,9.97e-15,26;UBERON:0003918,9.97e-15,26;UBERON:0011143,9.97e-15,26;UBERON:0005095,9.97e-15,26;UBERON:0007687,9.97e-15,26;UBERON:0009497,3.95e-14,25;UBERON:0000015,3.95e-14,25;UBERON:0002423,3.95e-14,25;UBERON:0006235,3.95e-14,25;UBERON:0004161,3.95e-14,25;UBERON:0002107,7.80e-14,19;UBERON:0006925,7.80e-14,19;UBERON:0008836,7.80e-14,19;UBERON:0000489,1.75e-13,31;UBERON:0006554,6.53e-13,47;UBERON:0003929,9.02e-13,54;UBERON:0002100,1.17e-12,199;UBERON:0001008,1.54e-12,48;UBERON:0003103,1.01e-11,68;UBERON:0009569,4.13e-11,112;UBERON:0003914,4.76e-11,117;UBERON:0004810,1.00e-10,10;UBERON:0006555,2.16e-10,16;UBERON:0004819,2.16e-10,16;UBERON:0005911,1.80e-09,82;UBERON:0004921,6.16e-09,118;UBERON:0004211,1.18e-08,15;UBERON:0009773,1.18e-08,15;UBERON:0001231,1.18e-08,15;UBERON:0001285,1.18e-08,15;UBERON:0007684,1.18e-08,15;UBERON:0004208,1.18e-08,15;UBERON:0006947,4.60e-08,3;UBERON:0004054,4.60e-08,3;UBERON:0001007,7.21e-08,145;UBERON:0001555,7.21e-08,145;UBERON:0007026,7.21e-08,145;UBERON:0003978,1.15e-07,3;UBERON:0009751,1.15e-07,3;UBERON:0000946,1.15e-07,3;UBERON:0002523,1.15e-07,3;UBERON:0005983,1.15e-07,3;UBERON:0002165,1.15e-07,3;UBERON:0002062,1.15e-07,3;UBERON:0007280,1.15e-07,3;UBERON:0000949,1.73e-07,45;UBERON:0002365,1.84e-07,31;UBERON:0002330,1.84e-07,31;UBERON:0006853,1.85e-07,3;UBERON:0007685,1.85e-07,3;UBERON:0004134,1.85e-07,3;UBERON:0003101,4.57e-07,22;UBERON:0000079,4.57e-07,22;UBERON:0005256,9.09e-07,122 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0.982935746006035,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,6.48346423713678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,2.25095607382472,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0.448346041655403,0.117434498643765,0,0,1.02077085627447,0,0.103325781175765,0,0,0,0,1.0100166837244,0.125118519871964,3.04770527032601,0,0,0,0,0,0,0.423863802319124,0.300091096084402,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,1.92972281457866,0,1.39310378409594,0.721879481669586,0.591534000199219,0.505754070234305,0.482022059766964,0.772057809126758,0.217879444092406,0,0.269662616320329,0.392442930250692,0.38474715694639,0,0,1.6462960453256,0,12.6755034821831,4.91413608338813,7.08947888017685,0,12.6678091699407,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0,0,2.85273810081437,1.01346914667305,0.205476322550383,0.537182889719687,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,1.63997980989798,0.300946099727719,0,0,0,0,2.5196248195744,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,13.6571178038533,1.20303882181971,0.184161977871793,0,0,0.524497659837696,4.06079651616671,5.08301224889137,2.35304930753057,0,3.9054102690364,0,0,0.431831832204279,0,0.812839312631559,0,3.82314409567557,2.49322802678617,1.34324852833307,0,0,0,0,0,4.73988653579522,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.384380134730212,0.893288987462089,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,6.02520324971387,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.586032717087576,0,0,1.98895302764489,0,0.296964680832639,0,0,0,0,0,0.844501632511974,1.79323189425963,0.828851746593443,0,0,0,0,3.86433909933505,0.179021174675609,0,1.1837208676432,0,3.33410970433911,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,1.84680620409113,0,0,0,0,0,1.09917112082235,0.533034776018635,0,0,0,0,0,0,0,0,10.3389051618733,1.63232808159148,17.1037216435068,0,0.995261931078505,0.353830258013357,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,11.0483632797829,2.41981432097328,0,0.695052375913368,0,0,0,0,0,0,2.27687636823834,0,0,0,0,57.4850738516279,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0.19871461170299,0.189932387867636,0.586654148204409,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,1.49494626680975,0.941425616810999,0,0,0.600420288709789,0.273810757783986,0,4.72741985561953,0,7.26134243307861,1.3749625440701,2.87149209830726,0.399358000997982,0,0,0.873385142327441,0,16.3094329338435,3.54524320382506,3.79112948553366,5.05526578906387,10.0396031145044,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,50.5932640860852,13.9004658557745,0,0,0,1.42939065274673,0.662091970365432,0,0.542999601753713,0,1.30634944043764,1.19730191562487,0,0,0,9.67244742275344,26.5013777824443,0.129282956361551,0,7.69890770479482,0,2.45611048905698,0.78602152549833,0.828478110694391,0,0,0,0,0,2.2562090462043,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.947015026375446,1.50940741051545,0,0.228840068396924,0,0.15543720058278,0.295710299979268,0.318593534327405,0,0.621051827505038,0.829412415681711,0,0,0,0,0,0,0,0.464033759878494,0,1.60011105865261,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79369063011563,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.42899623863589,0,4.68908406739856,0,0,22.917693363642,0.202612753855184,0,0,0.126831620387814,0,0.548257766857182,0.992422356778588,0,0,0.535701835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| ||
|short_description=p@chr3:114464766..114464816,- | |short_description=p@chr3:114464766..114464816,- | ||
}} | }} |
Latest revision as of 14:33, 29 July 2015
Short description: | p@chr3:114464766..114464816, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:114464766..114464816, - |
Coexpression cluster: | C2079_epididymis_kidney_liver_papillotubular_Hepatocyte_colon_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.15e-12 | 12 |
kidney cell | 7.61e-12 | 17 |
kidney epithelial cell | 7.61e-12 | 17 |
kidney tubule cell | 1.00e-10 | 10 |
nephron tubule epithelial cell | 1.00e-10 | 10 |
epithelial cell of nephron | 1.18e-08 | 15 |
brush border epithelial cell | 1.85e-07 | 3 |
kidney cortex tubule cell | 1.85e-07 | 3 |
epithelial cell of proximal tubule | 1.85e-07 | 3 |