FFCP PHASE1:Hg19::chrX:135863447..135863463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B2,Q15052,Q8N4Q3 | |UniProt=F5H8B2,Q15052,Q8N4Q3 | ||
|association_with_transcript=39bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | |association_with_transcript=39bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | ||
|cluster_id=chrX:135863447..135863463,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_12_at_ARHGEF6_5end | |description=CAGE_peak_12_at_ARHGEF6_5end | ||
|id=chrX:135863447..135863463,- | |id=chrX:135863447..135863463,- | ||
|ontology_enrichment_celltype=CL:0000136!1.23e-07!15 | |ontology_enrichment_celltype=CL:0000136!1.23e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.18e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.15e-11,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.72e-11;82!UBERON:0006241;2.19e-07;3!UBERON:0003057;2.19e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-57!115;UBERON:0001049!6.16e-32!57;UBERON:0005068!6.16e-32!57;UBERON:0006241!6.16e-32!57;UBERON:0007135!6.16e-32!57;UBERON:0001017!4.38e-27!82;UBERON:0005743!1.95e-26!86;UBERON:0002616!7.44e-25!59;UBERON:0000073!5.86e-24!94;UBERON:0001016!5.86e-24!94;UBERON:0000955!2.19e-23!69;UBERON:0006238!2.19e-23!69;UBERON:0003080!5.46e-22!42;UBERON:0003075!1.62e-21!86;UBERON:0007284!1.62e-21!86;UBERON:0002780!6.50e-21!41;UBERON:0001890!6.50e-21!41;UBERON:0006240!6.50e-21!41;UBERON:0002346!5.96e-20!90;UBERON:0002020!2.99e-15!34;UBERON:0003528!2.99e-15!34;UBERON:0001893!8.36e-15!34;UBERON:0002791!3.98e-14!33;UBERON:0004121!1.17e-13!169;UBERON:0003056!1.80e-13!61;UBERON:0000153!2.23e-13!129;UBERON:0007811!2.23e-13!129;UBERON:0000033!4.40e-13!123;UBERON:0000924!5.65e-13!173;UBERON:0006601!5.65e-13!173;UBERON:0002308!7.79e-13!9;UBERON:0000125!7.79e-13!9;UBERON:0001869!1.24e-12!32;UBERON:0002420!1.44e-12!9;UBERON:0007245!1.44e-12!9;UBERON:0010009!1.44e-12!9;UBERON:0010011!1.44e-12!9;UBERON:0000454!1.44e-12!9;UBERON:0002298!1.54e-12!8;UBERON:0003076!4.01e-11!15;UBERON:0003057!4.01e-11!15;UBERON:0009663!4.56e-10!7;UBERON:0001894!2.41e-08!7;UBERON:0006222!2.41e-08!7;UBERON:0002619!3.60e-08!22;UBERON:0000349!8.85e-08!5;UBERON:0000475!1.33e-07!365;UBERON:0004733!1.73e-07!12;UBERON:0002028!1.73e-07!12;UBERON:0007277!1.73e-07!12;UBERON:0000956!7.66e-07!25;UBERON:0000203!7.66e-07!25;UBERON:0004732!9.01e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;3.51e-22;7!UBERON:0002298;4.40e-18;6!UBERON:0000073;2.66e-15;53!UBERON:0002616;2.66e-15;53!UBERON:0001896;1.45e-13;3!UBERON:0005290;1.45e-13;3!UBERON:0004733;1.46e-12;12!UBERON:0002028;1.46e-12;12!UBERON:0004732;1.49e-11;13!UBERON:0003296;1.60e-10;4!UBERON:0010133;1.60e-10;4!UBERON:0002784;1.60e-10;4!UBERON:0002780;3.16e-10;41!UBERON:0001890;3.16e-10;41!UBERON:0001897;6.49e-10;2!UBERON:0000007;6.49e-10;2!UBERON:0001954;6.49e-10;2!UBERON:0002148;6.49e-10;2!UBERON:0006331;6.49e-10;2!UBERON:0009662;6.49e-10;2!UBERON:0003022;6.49e-10;2!UBERON:0002421;6.49e-10;2!UBERON:0010225;6.49e-10;2!UBERON:0002600;6.49e-10;2!UBERON:0000349;1.65e-08;5!UBERON:0001016;2.24e-08;83!UBERON:0000125;2.70e-08;9!UBERON:0002308;2.70e-08;9!UBERON:0000955;4.31e-08;68!UBERON:0007023;1.19e-07;114!UBERON:0002240;2.19e-07;3!UBERON:0005174;2.19e-07;3!UBERON:0001137;2.19e-07;3!UBERON:0001017;2.51e-07;75!UBERON:0000988;7.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.88e-26,56;UBERON:0005068,1.88e-26,56;UBERON:0006241,1.88e-26,56;UBERON:0007135,1.88e-26,56;UBERON:0007023,3.02e-24,114;UBERON:0000073,3.25e-22,53;UBERON:0002616,3.25e-22,53;UBERON:0001894,4.95e-22,7;UBERON:0006222,4.95e-22,7;UBERON:0001017,1.13e-20,81;UBERON:0001016,3.53e-20,89;UBERON:0003075,1.43e-18,82;UBERON:0007284,1.43e-18,82;UBERON:0000955,2.83e-18,68;UBERON:0006238,2.83e-18,68;UBERON:0002298,3.96e-18,6;UBERON:0003076,6.10e-18,15;UBERON:0003057,6.10e-18,15;UBERON:0002346,1.71e-17,86;UBERON:0010371,3.23e-15,104;UBERON:0001896,9.98e-14,3;UBERON:0005290,9.98e-14,3;UBERON:0010096,9.98e-14,3;UBERON:0010314,1.27e-13,132;UBERON:0002780,1.10e-12,41;UBERON:0001890,1.10e-12,41;UBERON:0003080,1.10e-12,41;UBERON:0006240,1.10e-12,41;UBERON:0004733,1.25e-12,12;UBERON:0002028,1.25e-12,12;UBERON:0007277,1.25e-12,12;UBERON:0004732,1.29e-11,13;UBERON:0004121,3.07e-11,171;UBERON:0000924,3.07e-11,171;UBERON:0006601,3.07e-11,171;UBERON:0002784,1.89e-10,4;UBERON:0003296,2.23e-10,4;UBERON:0010133,2.23e-10,4;UBERON:0001897,5.07e-10,2;UBERON:0010225,5.07e-10,2;UBERON:0000007,6.36e-10,2;UBERON:0001954,7.28e-10,2;UBERON:0003022,7.28e-10,2;UBERON:0002421,7.28e-10,2;UBERON:0002600,7.28e-10,2;UBERON:0002148,8.33e-10,2;UBERON:0006331,8.33e-10,2;UBERON:0009662,8.33e-10,2;UBERON:0000349,1.38e-08,5;UBERON:0000125,2.87e-08,9;UBERON:0002308,2.87e-08,9;UBERON:0003056,7.98e-08,61;UBERON:0002240,2.19e-07,3;UBERON:0005174,2.19e-07,3;UBERON:0001137,2.19e-07,3;UBERON:0000025,6.51e-07,192;UBERON:0000988,8.31e-07,3 | |||
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|short_description=p12@ARHGEF6 | |short_description=p12@ARHGEF6 | ||
}} | }} |
Latest revision as of 15:26, 19 September 2015
Short description: | p12@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARHGEF6_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 39bp_to_ENST00000535736, NM_004840, uc004fab.2_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | F5H8B2Q15052Q8N4Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fat cell | 7.15e-11 | 15 |