FFCP PHASE1:Hg19::chrX:106957890..106957911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:106957890..106957911,- | |||
|coexpression_cluster_id=C2446 | |||
|description=CAGE_peak_at_chrX:106957890..106957911,- | |description=CAGE_peak_at_chrX:106957890..106957911,- | ||
|id=chrX:106957890..106957911,- | |id=chrX:106957890..106957911,- | ||
|ontology_enrichment_celltype=CL:0000738!1.06e-12!140;CL:0002031!2.51e-10!124;CL:0002087!1.14e-09!119;CL:0000791!1.86e-08!18;CL:0000789!1.86e-08!18;CL:0002420!1.86e-08!18;CL:0002419!1.86e-08!18;CL:0000790!1.86e-08!18;CL:0000624!6.96e-08!6;CL:0000037!9.65e-08!172;CL:0000566!9.65e-08!172;CL:0002032!3.16e-07!165;CL:0000837!3.16e-07!165;CL:0000988!5.68e-07!182 | |ontology_enrichment_celltype=CL:0000738!1.06e-12!140;CL:0002031!2.51e-10!124;CL:0002087!1.14e-09!119;CL:0000791!1.86e-08!18;CL:0000789!1.86e-08!18;CL:0002420!1.86e-08!18;CL:0002419!1.86e-08!18;CL:0000790!1.86e-08!18;CL:0000624!6.96e-08!6;CL:0000037!9.65e-08!172;CL:0000566!9.65e-08!172;CL:0002032!3.16e-07!165;CL:0000837!3.16e-07!165;CL:0000988!5.68e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000624;8.51e-17;6!CL:0000815;3.48e-13;2!CL:0000792;3.48e-13;2!CL:0002677;3.48e-13;2!CL:0000097;2.90e-12;5!CL:0000791;1.01e-11;18!CL:0000789;1.01e-11;18!CL:0002419;1.01e-11;18!CL:0000898;4.40e-09;3!CL:0000084;2.76e-08;25!CL:0000163;5.30e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.28e-17,6;CL:0000815,2.49e-13,2;CL:0000792,2.49e-13,2;CL:0002677,2.49e-13,2;CL:0000738,2.61e-12,136;CL:0000097,2.96e-12,5;CL:0002028,2.96e-12,5;CL:0000791,9.07e-12,18;CL:0000789,9.07e-12,18;CL:0002420,9.07e-12,18;CL:0002419,9.07e-12,18;CL:0000790,9.07e-12,18;CL:0000838,3.98e-10,52;CL:0000542,6.67e-10,53;CL:0000051,6.67e-10,53;CL:0002031,9.74e-10,120;CL:0000037,3.09e-09,168;CL:0000898,3.52e-09,3;CL:0002032,1.35e-08,161;CL:0000837,1.35e-08,161;CL:0000988,1.42e-08,177;CL:0000084,2.57e-08,25;CL:0000827,2.57e-08,25;CL:0000163,5.36e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.01e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-10!115;UBERON:0002390!7.93e-08!102;UBERON:0003061!7.93e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.91e-07;1!UBERON:0002171;2.91e-07;1!UBERON:0000026;2.91e-07;1!UBERON:0008784;2.91e-07;1!UBERON:0006058;2.91e-07;1!UBERON:0003663;2.91e-07;1!UBERON:0004256;2.91e-07;1!UBERON:0004708;2.91e-07;1!UBERON:0002101;2.91e-07;1!UBERON:0004709;2.91e-07;1!UBERON:0006518;2.91e-07;1!UBERON:0008949;2.91e-07;1!UBERON:0002529;2.91e-07;1!UBERON:0010538;2.91e-07;1!UBERON:0003661;2.91e-07;1!UBERON:0010890;2.91e-07;1!UBERON:0002471;2.91e-07;1!UBERON:0001383;2.91e-07;1!UBERON:0000101;2.91e-07;1!UBERON:0010758;2.91e-07;1!UBERON:0010707;2.91e-07;1!UBERON:0000978;2.91e-07;1!UBERON:0002103;2.91e-07;1!UBERON:0001665;2.91e-07;1!UBERON:0003823;2.91e-07;1!UBERON:0000154;2.91e-07;1!UBERON:0010709;2.91e-07;1!UBERON:0002167;2.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.01e-07,1;UBERON:0001389,3.01e-07,1;UBERON:0000026,3.01e-07,1;UBERON:0008784,3.01e-07,1;UBERON:0006058,3.01e-07,1;UBERON:0003663,3.01e-07,1;UBERON:0004256,3.01e-07,1;UBERON:0004708,3.01e-07,1;UBERON:0002101,3.01e-07,1;UBERON:0004709,3.01e-07,1;UBERON:0002529,3.01e-07,1;UBERON:0010538,3.01e-07,1;UBERON:0003661,3.01e-07,1;UBERON:0010890,3.01e-07,1;UBERON:0002471,3.01e-07,1;UBERON:0001383,3.01e-07,1;UBERON:0004357,3.01e-07,1;UBERON:0004347,3.01e-07,1;UBERON:0005420,3.01e-07,1;UBERON:0005732,3.01e-07,1;UBERON:0010758,3.01e-07,1;UBERON:0010707,3.01e-07,1;UBERON:0000978,3.01e-07,1;UBERON:0002103,3.01e-07,1;UBERON:0001665,3.01e-07,1;UBERON:0003823,3.01e-07,1;UBERON:0000154,3.01e-07,1;UBERON:0010709,3.01e-07,1;UBERON:0005733,3.01e-07,1;UBERON:0005730,3.01e-07,1;UBERON:0002171,3.40e-07,1;UBERON:0006518,3.40e-07,1;UBERON:0008949,3.40e-07,1;UBERON:0000101,3.40e-07,1;UBERON:0002167,3.40e-07,1 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0.845726424575827,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,1.96682138424452,0.767658796194425,0,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0,0,0.257575567634187,0.581592955118259,0.377875943688809,0.727752183563449,0,0.822335776043652,0.619412741790207,0,0,0.236482229888585,0.689491361473237,0,1.35426486594342,0.752969358170419,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.65156653411535,0.605399502633369,0,0,1.05627643155971,0.212604299965044,0.419317291016752,0.112328631146495,0.300353785683013,0,0,0.79566670879636,0.547992461293902,0,0,0,0,0.400395987036012,0,0,0.954053754535364,5.12291672198504,4.11066032559657,1.91136614062614,0,0.560508562981536,0.263384084775077,0.196709770113833,4.71612915298998,2.67281948699362,0,1.62961133316795,0.946895611469467,3.89653456815823,0.111410456885174,2.65145316727353,2.43687284041983,0.270803863765016,0,0,0.164437904603676,0,0,0.593146252648242,0.535081656179426,0,0,0.766440987203842,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,1.00803371612366,0.802320587350522,1.88271725047639,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,5.80518723514162,15.5649549690318,4.03975786964416,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,2.37190332345469,0.77005821767849,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0.500170521059677,0,0.207970861530807,0,0,0,0,6.82222512167955,1.03473071292505,0,0.184369168541703,0,0,0.686286847621712,0.206768026122887,2.80428461064202,0.320182673410333,0,0,0,0.248107807818777,0,0,0.640695746278505,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,1.15755106853338,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0,0.822724546172388,0.648473311192717,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0.493217028184668,2.3948309234694,0,0.969332746095218,0,0,0,0,0.724999575434793,0.1137934482855,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.230850775511391,0,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.775912131907355,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.387848869084652,0,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.639701945702943,0.23806443146374,0.129177819672012,0.186224142887574,0,0.0636471582781649,0,0.653150243690884,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0.2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|short_description=p@chrX:106957890..106957911,- | |short_description=p@chrX:106957890..106957911,- | ||
}} | }} |
Latest revision as of 04:53, 1 August 2015
Short description: | p@chrX:106957890..106957911, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:106957890..106957911, - |
Coexpression cluster: | C2446_Mast_CD4_CD8_CD19_Natural_Neutrophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 6.28e-17 | 6 |
regulatory T cell | 2.49e-13 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.49e-13 | 2 |
naive regulatory T cell | 2.49e-13 | 2 |
leukocyte | 2.61e-12 | 136 |
mast cell | 2.96e-12 | 5 |
basophil mast progenitor cell | 2.96e-12 | 5 |
mature alpha-beta T cell | 9.07e-12 | 18 |
alpha-beta T cell | 9.07e-12 | 18 |
immature T cell | 9.07e-12 | 18 |
mature T cell | 9.07e-12 | 18 |
immature alpha-beta T cell | 9.07e-12 | 18 |
lymphoid lineage restricted progenitor cell | 3.98e-10 | 52 |
lymphocyte | 6.67e-10 | 53 |
common lymphoid progenitor | 6.67e-10 | 53 |
hematopoietic lineage restricted progenitor cell | 9.74e-10 | 120 |
hematopoietic stem cell | 3.09e-09 | 168 |
naive T cell | 3.52e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.35e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-08 | 161 |
hematopoietic cell | 1.42e-08 | 177 |
T cell | 2.57e-08 | 25 |
pro-T cell | 2.57e-08 | 25 |
endocrine cell | 5.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.01e-07 | 1 |
soleus muscle | 3.01e-07 | 1 |
appendage | 3.01e-07 | 1 |
lower limb segment | 3.01e-07 | 1 |
multi-limb segment region | 3.01e-07 | 1 |
hindlimb muscle | 3.01e-07 | 1 |
hindlimb zeugopod muscle | 3.01e-07 | 1 |
paired limb/fin | 3.01e-07 | 1 |
limb | 3.01e-07 | 1 |
pelvic appendage | 3.01e-07 | 1 |
limb segment | 3.01e-07 | 1 |
paired limb/fin segment | 3.01e-07 | 1 |
limb muscle | 3.01e-07 | 1 |
pelvic complex muscle | 3.01e-07 | 1 |
zeugopod | 3.01e-07 | 1 |
muscle of leg | 3.01e-07 | 1 |
paired limb/fin bud | 3.01e-07 | 1 |
limb bud | 3.01e-07 | 1 |
pelvic appendage bud | 3.01e-07 | 1 |
limb/fin field | 3.01e-07 | 1 |
subdivision of organism along appendicular axis | 3.01e-07 | 1 |
appendage girdle complex | 3.01e-07 | 1 |
leg | 3.01e-07 | 1 |
hindlimb | 3.01e-07 | 1 |
triceps surae | 3.01e-07 | 1 |
hindlimb zeugopod | 3.01e-07 | 1 |
posterior region of body | 3.01e-07 | 1 |
pelvic complex | 3.01e-07 | 1 |
limb field | 3.01e-07 | 1 |
hindlimb/pelvic fin field | 3.01e-07 | 1 |
lower lobe of right lung | 3.40e-07 | 1 |
right lung lobe | 3.40e-07 | 1 |
lower lobe of lung | 3.40e-07 | 1 |
lobe of lung | 3.40e-07 | 1 |
right lung | 3.40e-07 | 1 |