FFCP PHASE1:Hg19::chr2:74146692..74146709,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:74146692..74146709,+ | |||
|coexpression_cluster_id=C2358 | |||
|description=CAGE_peak_at_chr2:74146692..74146709,+ | |description=CAGE_peak_at_chr2:74146692..74146709,+ | ||
|id=chr2:74146692..74146709,+ | |id=chr2:74146692..74146709,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.42e-15;1!UBERON:0009143;8.74e-15;1!UBERON:0005754;1.97e-14;1!UBERON:0004874;1.97e-14;1!UBERON:0007297;7.27e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.67e-12!3;UBERON:0004054!2.67e-12!3;UBERON:0003101!4.43e-12!22;UBERON:0000079!4.43e-12!22;UBERON:0003135!8.89e-12!11;UBERON:0007023!1.24e-11!115;UBERON:0000160!1.65e-09!27;UBERON:0005904!2.50e-09!4;UBERON:0001046!5.68e-09!19;UBERON:0000059!8.46e-09!11;UBERON:0005409!9.37e-09!35;UBERON:0005156!8.85e-08!59;UBERON:0000990!8.85e-08!59;UBERON:0001155!3.66e-07!9 | |ontology_enrichment_uberon=UBERON:0006947!2.67e-12!3;UBERON:0004054!2.67e-12!3;UBERON:0003101!4.43e-12!22;UBERON:0000079!4.43e-12!22;UBERON:0003135!8.89e-12!11;UBERON:0007023!1.24e-11!115;UBERON:0000160!1.65e-09!27;UBERON:0005904!2.50e-09!4;UBERON:0001046!5.68e-09!19;UBERON:0000059!8.46e-09!11;UBERON:0005409!9.37e-09!35;UBERON:0005156!8.85e-08!59;UBERON:0000990!8.85e-08!59;UBERON:0001155!3.66e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.12e-18;3!UBERON:0004054;2.12e-18;3!UBERON:0006834;1.97e-14;1!UBERON:0001000;1.97e-14;1!UBERON:0000989;1.97e-14;1!UBERON:0000998;1.97e-14;1!UBERON:0000996;1.97e-14;1!UBERON:0008811;1.97e-14;1!UBERON:0006868;1.97e-14;1!UBERON:0005352;1.97e-14;1!UBERON:0005409;2.16e-14;22!UBERON:0005904;4.70e-14;4!UBERON:0004921;6.77e-13;33!UBERON:0000160;4.13e-12;17!UBERON:0000059;1.47e-11;11!UBERON:0003135;2.56e-11;11!UBERON:0004175;2.98e-10;21!UBERON:0001255;3.82e-08;2!UBERON:0001556;3.82e-08;2!UBERON:0001155;6.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.94e-18,3;UBERON:0004054,1.94e-18,3;UBERON:0001000,1.23e-14,1;UBERON:0005352,1.23e-14,1;UBERON:0000989,1.61e-14,1;UBERON:0008811,1.61e-14,1;UBERON:0006258,1.61e-14,1;UBERON:0005876,1.61e-14,1;UBERON:0004874,1.61e-14,1;UBERON:0006834,1.84e-14,1;UBERON:0000996,2.41e-14,1;UBERON:0000998,2.75e-14,1;UBERON:0006868,2.75e-14,1;UBERON:0005904,4.40e-14,4;UBERON:0005409,9.87e-13,25;UBERON:0000160,4.07e-12,17;UBERON:0000059,1.27e-11,11;UBERON:0003135,2.34e-11,11;UBERON:0004175,1.19e-08,25;UBERON:0007023,1.79e-08,114;UBERON:0001255,3.82e-08,2;UBERON:0001556,3.82e-08,2;UBERON:0003064,8.42e-08,28;UBERON:0001155,5.86e-07,9;UBERON:0001046,7.19e-07,19;UBERON:0003133,8.67e-07,48 | |||
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| ||
|short_description=p@chr2:74146692..74146709,+ | |short_description=p@chr2:74146692..74146709,+ | ||
}} | }} |
Latest revision as of 12:13, 29 July 2015
Short description: | p@chr2:74146692..74146709, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74146692..74146709, + |
Coexpression cluster: | C2358_umbilical_ductus_rectum_stomach_smooth_bladder_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.94e-18 | 3 |
internal male genitalia | 1.94e-18 | 3 |
vas deferens | 1.23e-14 | 1 |
spermatic cord | 1.23e-14 | 1 |
penis | 1.61e-14 | 1 |
intromittent organ | 1.61e-14 | 1 |
lateral plate mesenchyme | 1.61e-14 | 1 |
undifferentiated genital tubercle | 1.61e-14 | 1 |
somatopleure | 1.61e-14 | 1 |
uterus or analog | 1.84e-14 | 1 |
vagina | 2.41e-14 | 1 |
seminal vesicle | 2.75e-14 | 1 |
seminal fluid secreting gland | 2.75e-14 | 1 |
duct of male reproductive system | 4.40e-14 | 4 |
gastrointestinal system | 9.87e-13 | 25 |
intestine | 4.07e-12 | 17 |
large intestine | 1.27e-11 | 11 |
male reproductive organ | 2.34e-11 | 11 |
internal genitalia | 1.19e-08 | 25 |
adult organism | 1.79e-08 | 114 |
urinary bladder | 3.82e-08 | 2 |
lower urinary tract | 3.82e-08 | 2 |
intermediate mesoderm | 8.42e-08 | 28 |
colon | 5.86e-07 | 9 |
hindgut | 7.19e-07 | 19 |
reproductive organ | 8.67e-07 | 48 |